RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 RMND1Q9NWS8 449 aa14.67□□□□□ -0.06
CXCL12-205ENST00000395794 MAPK8IP1Q9UQF2 711 aa14.67□□□□□ -0.06
CXCL12-205ENST00000395794 TRAF3IP3Q9Y228 551 aa14.67□□□□□ -0.06
CXCL12-205ENST00000395794 ATP8B3O60423 1300 aa14.66□□□□□ -0.06
CXCL12-205ENST00000395794 TRAV19A0A0A6YYK7 116 aa14.66□□□□□ -0.06
CXCL12-205ENST00000395794 IKBKBO14920 756 aa14.66□□□□□ -0.06
CXCL12-205ENST00000395794 PRAMEF12O95522 483 aa14.66□□□□□ -0.06
CXCL12-205ENST00000395794 C4BPAP04003 597 aaKnown RBP14.66□□□□□ -0.06
CXCL12-205ENST00000395794 SP9P0CG40 484 aa14.66□□□□□ -0.06
CXCL12-205ENST00000395794 NR2F2P24468 414 aa14.66□□□□□ -0.06
CXCL12-205ENST00000395794 CCNE1P24864 410 aa14.66□□□□□ -0.06
CXCL12-205ENST00000395794 PDE6CP51160 858 aa14.66□□□□□ -0.06
CXCL12-205ENST00000395794 PPP2R5DQ14738 602 aa14.66□□□□□ -0.06
CXCL12-205ENST00000395794 CCDC142Q17RM4 750 aa14.66□□□□□ -0.06
CXCL12-205ENST00000395794 INTS8Q75QN2 995 aaKnown RBP14.66□□□□□ -0.06
CXCL12-205ENST00000395794 TMEM150AQ86TG1 271 aa14.66□□□□□ -0.06
CXCL12-205ENST00000395794 RALGPS2Q86X27 583 aaPredicted RBP14.66□□□□□ -0.06
CXCL12-205ENST00000395794 GUF1Q8N442 669 aaKnown RBP14.66□□□□□ -0.06
CXCL12-205ENST00000395794 STKLD1Q8NE28 680 aa14.66□□□□□ -0.06
CXCL12-205ENST00000395794 PLEKHO2Q8TD55 490 aa14.66□□□□□ -0.06
CXCL12-205ENST00000395794 TAF4BQ92750 862 aa14.66□□□□□ -0.06
CXCL12-205ENST00000395794 PCED1BQ96HM7 432 aa14.66□□□□□ -0.06
CXCL12-205ENST00000395794 TNIP3Q96KP6 325 aa14.66□□□□□ -0.06
CXCL12-205ENST00000395794 SPATA17Q96L03 361 aa14.66□□□□□ -0.06
CXCL12-205ENST00000395794 IER2Q9BTL4 223 aa14.66□□□□□ -0.06
CXCL12-205ENST00000395794 ELOVL4Q9GZR5 314 aa14.66□□□□□ -0.06
CXCL12-205ENST00000395794 GZF1Q9H116 711 aaPredicted RBP14.66□□□□□ -0.06
CXCL12-205ENST00000395794 XYLT2Q9H1B5 865 aa14.66□□□□□ -0.06
CXCL12-205ENST00000395794 VRTNQ9H8Y1 702 aa14.66□□□□□ -0.06
CXCL12-205ENST00000395794 FBXO4Q9UKT5 387 aa14.66□□□□□ -0.06
CXCL12-205ENST00000395794 ARNTLO00327 626 aa14.65□□□□□ -0.06
CXCL12-205ENST00000395794 MAPK13O15264 365 aa14.65□□□□□ -0.06
CXCL12-205ENST00000395794 SMC2O95347 1197 aa14.65□□□□□ -0.06
CXCL12-205ENST00000395794 CKMP06732 381 aa14.65□□□□□ -0.06
CXCL12-205ENST00000395794 USP17L7P0C7H9 530 aa14.65□□□□□ -0.06
CXCL12-205ENST00000395794 VAMP7P51809 220 aa14.65□□□□□ -0.06
CXCL12-205ENST00000395794 DLG4P78352 724 aa14.65□□□□□ -0.06
CXCL12-205ENST00000395794 AMPD2Q01433 879 aa14.65□□□□□ -0.06
CXCL12-205ENST00000395794 ADAM9Q13443 819 aa14.65□□□□□ -0.06
CXCL12-205ENST00000395794 LRRC32Q14392 662 aa14.65□□□□□ -0.06
CXCL12-205ENST00000395794 NFIL3Q16649 462 aa14.65□□□□□ -0.06
CXCL12-205ENST00000395794 ITPRIPL2Q3MIP1 535 aa14.65□□□□□ -0.06
CXCL12-205ENST00000395794 DENND5BQ6ZUT9 1274 aa14.65□□□□□ -0.06
CXCL12-205ENST00000395794 B3GALNT2Q8NCR0 500 aa14.65□□□□□ -0.06
CXCL12-205ENST00000395794 CCDC150Q8NCX0 1101 aa14.65□□□□□ -0.06
CXCL12-205ENST00000395794 TTC8Q8TAM2 541 aa14.65□□□□□ -0.06
CXCL12-205ENST00000395794 ZFYVE19Q96K21 471 aa14.65□□□□□ -0.06
CXCL12-205ENST00000395794 LRRC3BQ96PB8 259 aa14.65□□□□□ -0.06
CXCL12-205ENST00000395794 IMPG2Q9BZV3 1241 aa14.65□□□□□ -0.06
CXCL12-205ENST00000395794 DNAI2Q9GZS0 605 aa14.65□□□□□ -0.06
CXCL12-205ENST00000395794 LMAN1LQ9HAT1 526 aa14.65□□□□□ -0.06
CXCL12-205ENST00000395794 TRPM5Q9NZQ8 1165 aa14.65□□□□□ -0.06
CXCL12-205ENST00000395794 PIEZO1Q92508 2521 aa14.65□□□□□ -0.06
CXCL12-205ENST00000395794 NCANO14594 1321 aa14.65□□□□□ -0.06
CXCL12-205ENST00000395794 PRR23AA6NEV1 266 aa14.64□□□□□ -0.07
CXCL12-205ENST00000395794 SPECC1L-ADORA2AF8WAN1 911 aa14.64□□□□□ -0.07
CXCL12-205ENST00000395794 PSMC2P35998 433 aaKnown RBP14.64□□□□□ -0.07
CXCL12-205ENST00000395794 PIK3CAP42336 1068 aa14.64□□□□□ -0.07
CXCL12-205ENST00000395794 PPP3CCP48454 512 aa14.64□□□□□ -0.07
CXCL12-205ENST00000395794 CSTF1Q05048 431 aaKnown RBP14.64□□□□□ -0.07
CXCL12-205ENST00000395794 ZNF268Q14587 947 aaPredicted RBP14.64□□□□□ -0.07
CXCL12-205ENST00000395794 ZNF528Q3MIS6 628 aa14.64□□□□□ -0.07
CXCL12-205ENST00000395794 ZACNQ401N2 412 aa14.64□□□□□ -0.07
CXCL12-205ENST00000395794 SCARA5Q6ZMJ2 495 aa14.64□□□□□ -0.07
CXCL12-205ENST00000395794 SV2AQ7L0J3 742 aa14.64□□□□□ -0.07
CXCL12-205ENST00000395794 ASCL5Q7RTU5 278 aa14.64□□□□□ -0.07
CXCL12-205ENST00000395794 FAM186BQ8IYM0 893 aa14.64□□□□□ -0.07
CXCL12-205ENST00000395794 TTC16Q8NEE8 873 aa14.64□□□□□ -0.07
CXCL12-205ENST00000395794 USP13Q92995 863 aaPredicted RBP14.64□□□□□ -0.07
CXCL12-205ENST00000395794 C8orf48Q96LL4 319 aa14.64□□□□□ -0.07
CXCL12-205ENST00000395794 MED10Q9BTT4 135 aa14.64□□□□□ -0.07
CXCL12-205ENST00000395794 GTPBP4Q9BZE4 634 aaKnown RBP14.64□□□□□ -0.07
CXCL12-205ENST00000395794 DPEP3Q9H4B8 488 aa14.64□□□□□ -0.07
CXCL12-205ENST00000395794 SMYD3Q9H7B4 428 aa14.64□□□□□ -0.07
CXCL12-205ENST00000395794 GKN1Q9NS71 199 aa14.64□□□□□ -0.07
CXCL12-205ENST00000395794 GTSE1Q9NYZ3 720 aa14.64□□□□□ -0.07
CXCL12-205ENST00000395794 R4GN57 208 aa14.64□□□□□ -0.07
CXCL12-205ENST00000395794 F8VP50 259 aa14.63□□□□□ -0.07
CXCL12-205ENST00000395794 AKAP3O75969 853 aa14.63□□□□□ -0.07
CXCL12-205ENST00000395794 HDCP19113 662 aa14.63□□□□□ -0.07
CXCL12-205ENST00000395794 CTHP32929 405 aa14.63□□□□□ -0.07
CXCL12-205ENST00000395794 SOX9P48436 509 aa14.63□□□□□ -0.07
CXCL12-205ENST00000395794 CDH8P55286 799 aa14.63□□□□□ -0.07
CXCL12-205ENST00000395794 NOP14P78316 857 aaKnown RBP14.63□□□□□ -0.07
CXCL12-205ENST00000395794 FAM160A1Q05DH4 1040 aa14.63□□□□□ -0.07
CXCL12-205ENST00000395794 ENPEPQ07075 957 aa14.63□□□□□ -0.07
CXCL12-205ENST00000395794 PNOCQ13519 176 aa14.63□□□□□ -0.07
CXCL12-205ENST00000395794 PDGFRLQ15198 375 aa14.63□□□□□ -0.07
CXCL12-205ENST00000395794 FMR1NBQ8N0W7 255 aaPredicted RBP14.63□□□□□ -0.07
CXCL12-205ENST00000395794 ATRIPQ8WXE1 791 aa14.63□□□□□ -0.07
CXCL12-205ENST00000395794 EXOC4Q96A65 974 aa14.63□□□□□ -0.07
CXCL12-205ENST00000395794 DCBLD2Q96PD2 775 aa14.63□□□□□ -0.07
CXCL12-205ENST00000395794 GSDMAQ96QA5 445 aa14.63□□□□□ -0.07
CXCL12-205ENST00000395794 TSG101Q99816 390 aa14.63□□□□□ -0.07
CXCL12-205ENST00000395794 CHRDQ9H2X0 955 aa14.63□□□□□ -0.07
CXCL12-205ENST00000395794 CCL26Q9Y258 94 aa14.63□□□□□ -0.07
CXCL12-205ENST00000395794 SHISA7A6NL88 538 aa14.62□□□□□ -0.07
CXCL12-205ENST00000395794 CETN3O15182 167 aa14.62□□□□□ -0.07
CXCL12-205ENST00000395794 STX10O60499 249 aa14.62□□□□□ -0.07
CXCL12-205ENST00000395794 KINO60870 393 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms