RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 ARL14EPQ8N8R7 260 aaPredicted RBP14.79□□□□□ -0.04
CXCL12-202ENST00000374426 SPATA18Q8TC71 538 aa14.79□□□□□ -0.04
CXCL12-202ENST00000374426 ATP2A3Q93084 1043 aa14.79□□□□□ -0.04
CXCL12-202ENST00000374426 FUBP3Q96I24 572 aaKnown RBP eCLIP14.79□□□□□ -0.04
CXCL12-202ENST00000374426 DUSP15Q9H1R2 295 aaPredicted RBP14.79□□□□□ -0.04
CXCL12-202ENST00000374426 GCNT4Q9P109 453 aa14.79□□□□□ -0.04
CXCL12-202ENST00000374426 PCDHB13Q9Y5F0 798 aa14.79□□□□□ -0.04
CXCL12-202ENST00000374426 ZZEF1O43149 2961 aa14.78□□□□□ -0.04
CXCL12-202ENST00000374426 PTPRJQ12913 1337 aa14.78□□□□□ -0.04
CXCL12-202ENST00000374426 FRMD3A2A2Y4 597 aa14.78□□□□□ -0.04
CXCL12-202ENST00000374426 C2orf78A6NCI8 922 aa14.78□□□□□ -0.04
CXCL12-202ENST00000374426 DCLK1O15075 740 aa14.78□□□□□ -0.04
CXCL12-202ENST00000374426 ATP2C2O75185 946 aa14.78□□□□□ -0.04
CXCL12-202ENST00000374426 IDEP14735 1019 aa14.78□□□□□ -0.04
CXCL12-202ENST00000374426 PCSK1P29120 753 aa14.78□□□□□ -0.04
CXCL12-202ENST00000374426 PMLP29590 882 aa14.78□□□□□ -0.04
CXCL12-202ENST00000374426 IFNAR2P48551 515 aa14.78□□□□□ -0.04
CXCL12-202ENST00000374426 LHX1P48742 406 aa14.78□□□□□ -0.04
CXCL12-202ENST00000374426 RBP5P82980 135 aa14.78□□□□□ -0.04
CXCL12-202ENST00000374426 DMC1Q14565 340 aa14.78□□□□□ -0.04
CXCL12-202ENST00000374426 LMBRD2Q68DH5 695 aaPredicted RBP14.78□□□□□ -0.04
CXCL12-202ENST00000374426 TCEAL6Q6IPX3 200 aa14.78□□□□□ -0.04
CXCL12-202ENST00000374426 FAM171BQ6P995 826 aa14.78□□□□□ -0.04
CXCL12-202ENST00000374426 LIMS2Q7Z4I7 341 aa14.78□□□□□ -0.04
CXCL12-202ENST00000374426 SCN4BQ8IWT1 228 aa14.78□□□□□ -0.04
CXCL12-202ENST00000374426 SYCP3Q8IZU3 236 aa14.78□□□□□ -0.04
CXCL12-202ENST00000374426 SH3RF2Q8TEC5 729 aa14.78□□□□□ -0.04
CXCL12-202ENST00000374426 CD101Q93033 1021 aa14.78□□□□□ -0.04
CXCL12-202ENST00000374426 TCEAL3Q969E4 200 aa14.78□□□□□ -0.04
CXCL12-202ENST00000374426 EXOC4Q96A65 974 aa14.78□□□□□ -0.04
CXCL12-202ENST00000374426 LINC00597Q9H2U6 94 aa14.78□□□□□ -0.04
CXCL12-202ENST00000374426 PCIF1Q9H4Z3 704 aa14.78□□□□□ -0.04
CXCL12-202ENST00000374426 VPS45Q9NRW7 570 aa14.78□□□□□ -0.04
CXCL12-202ENST00000374426 EBF1Q9UH73 591 aa14.78□□□□□ -0.04
CXCL12-202ENST00000374426 IGF2RP11717 2491 aa14.77□□□□□ -0.04
CXCL12-202ENST00000374426 ANAPC1Q9H1A4 1944 aa14.77□□□□□ -0.04
CXCL12-202ENST00000374426 A0A087X0B3 334 aa14.77□□□□□ -0.05
CXCL12-202ENST00000374426 APBB3O95704 486 aa14.77□□□□□ -0.05
CXCL12-202ENST00000374426 TMEM191BP0C7N4 346 aa14.77□□□□□ -0.05
CXCL12-202ENST00000374426 TCF3P15923 654 aa14.77□□□□□ -0.05
CXCL12-202ENST00000374426 LMO2P25791 158 aa14.77□□□□□ -0.05
CXCL12-202ENST00000374426 TXLNAP40222 546 aa14.77□□□□□ -0.05
CXCL12-202ENST00000374426 MAGEA11P43364 429 aa14.77□□□□□ -0.05
CXCL12-202ENST00000374426 ZXDBP98169 803 aa14.77□□□□□ -0.05
CXCL12-202ENST00000374426 ALCAMQ13740 583 aa14.77□□□□□ -0.05
CXCL12-202ENST00000374426 FAM173BQ6P4H8 233 aa14.77□□□□□ -0.05
CXCL12-202ENST00000374426 FSIP1Q8NA03 581 aa14.77□□□□□ -0.05
CXCL12-202ENST00000374426 OR5B17Q8NGF7 314 aa14.77□□□□□ -0.05
CXCL12-202ENST00000374426 NOC3LQ8WTT2 800 aaKnown RBP14.77□□□□□ -0.05
CXCL12-202ENST00000374426 KBTBD7Q8WVZ9 684 aa14.77□□□□□ -0.05
CXCL12-202ENST00000374426 ACDQ96AP0 544 aa14.77□□□□□ -0.05
CXCL12-202ENST00000374426 CHAMP1Q96JM3 812 aa14.77□□□□□ -0.05
CXCL12-202ENST00000374426 CRTAC1Q9NQ79 661 aa14.77□□□□□ -0.05
CXCL12-202ENST00000374426 INTS13Q9NVM9 706 aa14.77□□□□□ -0.05
CXCL12-202ENST00000374426 ANGPTL2Q9UKU9 493 aa14.77□□□□□ -0.05
CXCL12-202ENST00000374426 ARHGAP26Q9UNA1 814 aa14.77□□□□□ -0.05
CXCL12-202ENST00000374426 ABCA7Q8IZY2 2146 aa14.77□□□□□ -0.05
CXCL12-202ENST00000374426 PRPF6O94906 941 aaKnown RBP14.76□□□□□ -0.05
CXCL12-202ENST00000374426 HDCP19113 662 aa14.76□□□□□ -0.05
CXCL12-202ENST00000374426 USP46P62068 366 aa14.76□□□□□ -0.05
CXCL12-202ENST00000374426 PSMC1P62191 440 aaKnown RBP14.76□□□□□ -0.05
CXCL12-202ENST00000374426 CEBPZQ03701 1054 aaKnown RBP14.76□□□□□ -0.05
CXCL12-202ENST00000374426 MYO1EQ12965 1108 aa14.76□□□□□ -0.05
CXCL12-202ENST00000374426 RESTQ13127 1097 aa14.76□□□□□ -0.05
CXCL12-202ENST00000374426 PSMD2Q13200 908 aa14.76□□□□□ -0.05
CXCL12-202ENST00000374426 CUL4AQ13619 759 aa14.76□□□□□ -0.05
CXCL12-202ENST00000374426 KCNB1Q14721 858 aa14.76□□□□□ -0.05
CXCL12-202ENST00000374426 ELF2Q15723 593 aa14.76□□□□□ -0.05
CXCL12-202ENST00000374426 C4orf50Q6ZRC1 276 aa14.76□□□□□ -0.05
CXCL12-202ENST00000374426 CCDC73Q6ZRK6 1079 aa14.76□□□□□ -0.05
CXCL12-202ENST00000374426 DPH6Q7L8W6 267 aa14.76□□□□□ -0.05
CXCL12-202ENST00000374426 GPD1LQ8N335 351 aa14.76□□□□□ -0.05
CXCL12-202ENST00000374426 MYLPFQ96A32 169 aa14.76□□□□□ -0.05
CXCL12-202ENST00000374426 HPDLQ96IR7 371 aa14.76□□□□□ -0.05
CXCL12-202ENST00000374426 SPATA17Q96L03 361 aa14.76□□□□□ -0.05
CXCL12-202ENST00000374426 SYT15Q9BQS2 421 aa14.76□□□□□ -0.05
CXCL12-202ENST00000374426 LSM14BQ9BX40 385 aaKnown RBP14.76□□□□□ -0.05
CXCL12-202ENST00000374426 PANK2Q9BZ23 570 aa14.76□□□□□ -0.05
CXCL12-202ENST00000374426 PANK4Q9NVE7 773 aa14.76□□□□□ -0.05
CXCL12-202ENST00000374426 CACNA1GO43497 2377 aa14.76□□□□□ -0.05
CXCL12-202ENST00000374426 ANTXRLA6NF34 631 aa14.75□□□□□ -0.05
CXCL12-202ENST00000374426 PDCP20941 246 aa14.75□□□□□ -0.05
CXCL12-202ENST00000374426 BDNFP23560 247 aa14.75□□□□□ -0.05
CXCL12-202ENST00000374426 OPRD1P41143 372 aa14.75□□□□□ -0.05
CXCL12-202ENST00000374426 STAT6P42226 847 aa14.75□□□□□ -0.05
CXCL12-202ENST00000374426 SHC2P98077 582 aa14.75□□□□□ -0.05
CXCL12-202ENST00000374426 NR1H3Q13133 447 aa14.75□□□□□ -0.05
CXCL12-202ENST00000374426 GAB4Q2WGN9 574 aa14.75□□□□□ -0.05
CXCL12-202ENST00000374426 RNF43Q68DV7 783 aa14.75□□□□□ -0.05
CXCL12-202ENST00000374426 VSTM1Q6UX27 236 aa14.75□□□□□ -0.05
CXCL12-202ENST00000374426 CBWD2Q8IUF1 395 aa14.75□□□□□ -0.05
CXCL12-202ENST00000374426 GLIS3Q8NEA6 775 aa14.75□□□□□ -0.05
CXCL12-202ENST00000374426 ANKRD36BP1Q96IX9 119 aa14.75□□□□□ -0.05
CXCL12-202ENST00000374426 UPF2Q9HAU5 1272 aaKnown RBP14.75□□□□□ -0.05
CXCL12-202ENST00000374426 MAGEC2Q9UBF1 373 aaPredicted RBP14.75□□□□□ -0.05
CXCL12-202ENST00000374426 CDH9Q9ULB4 789 aa14.75□□□□□ -0.05
CXCL12-202ENST00000374426 MYO16Q9Y6X6 1858 aa14.75□□□□□ -0.05
CXCL12-202ENST00000374426 KIAA1549LQ6ZVL6 1849 aa14.75□□□□□ -0.05
CXCL12-202ENST00000374426 BCLAF3A2AJT9 711 aaKnown RBP14.74□□□□□ -0.05
CXCL12-202ENST00000374426 K7EQS6 105 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms