RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 RASSF3Q86WH2 238 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 OLFM3Q96PB7 478 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 RANBP17Q9H2T7 1088 aaKnown RBP12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 ZNF287Q9HBT7 754 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 TDRKHQ9Y2W6 561 aaKnown RBP12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 SDR42E2A6NKP2 422 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 TTLL13PA6NNM8 815 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 P4HA2O15460 535 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 SNNO75324 88 aaPredicted RBP12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 L1CAMP32004 1257 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 GPSM2P81274 684 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 KLHL35Q6PF15 583 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 C3orf62Q6ZUJ4 267 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 ST13P4Q8IZP2 240 aaPredicted RBP12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 DIS3LQ8TF46 1054 aaKnown RBP12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 GDPD5Q8WTR4 605 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 TUBB6Q9BUF5 446 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 AVENQ9NQS1 362 aaPredicted RBP12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 LARSQ9P2J5 1176 aaKnown RBP12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 ZNRF3Q9ULT6 936 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 CAPN8A6NHC0 703 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 BOLA2-SMG1P6H3BVE0 249 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 CHN2P52757 468 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 FOLH1Q04609 750 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 FAAP100Q0VG06 881 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 BST1Q10588 318 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 NFX1Q12986 1120 aaKnown RBP12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 USP41Q3LFD5 358 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 ANKRD20A4Q4UJ75 823 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 C1orf146Q5VVC0 180 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 SMC1BQ8NDV3 1235 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 FBXO36Q8NEA4 188 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 ERMNQ8TAM6 284 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 TTC17Q96AE7 1141 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 HAUS1Q96CS2 278 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 SH2D3AQ9BRG2 576 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 FOXP3Q9BZS1 431 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 TUT1Q9H6E5 874 aaKnown RBP12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 TELO2Q9Y4R8 837 aa12.22□□□□□ -0.45
SMARCA1-201ENST00000371121 SF3B1O75533 1304 aaKnown RBP eCLIP12.21□□□□□ -0.45
SMARCA1-201ENST00000371121 TMEM150BA6NC51 233 aa12.21□□□□□ -0.45
SMARCA1-201ENST00000371121 PSTPIP1O43586 416 aa12.21□□□□□ -0.45
SMARCA1-201ENST00000371121 CCNT2O60583 730 aaKnown RBP12.21□□□□□ -0.45
SMARCA1-201ENST00000371121 PDE5AO76074 875 aa12.21□□□□□ -0.45
SMARCA1-201ENST00000371121 GPC3P51654 580 aa12.21□□□□□ -0.45
SMARCA1-201ENST00000371121 SPP2Q13103 211 aa12.21□□□□□ -0.45
SMARCA1-201ENST00000371121 AP3B2Q13367 1082 aa12.21□□□□□ -0.45
SMARCA1-201ENST00000371121 KAZNQ674X7 775 aa12.21□□□□□ -0.45
SMARCA1-201ENST00000371121 SLC39A4Q6P5W5 647 aa12.21□□□□□ -0.45
SMARCA1-201ENST00000371121 BBOF1Q8ND07 529 aa12.21□□□□□ -0.45
SMARCA1-201ENST00000371121 EXD1Q8NHP7 514 aa12.21□□□□□ -0.45
SMARCA1-201ENST00000371121 RPGRQ92834 1020 aaKnown RBP12.21□□□□□ -0.45
SMARCA1-201ENST00000371121 MTBPQ96DY7 904 aa12.21□□□□□ -0.45
SMARCA1-201ENST00000371121 MMP19Q99542 508 aa12.21□□□□□ -0.45
SMARCA1-201ENST00000371121 TAGLN3Q9UI15 199 aa12.21□□□□□ -0.45
SMARCA1-201ENST00000371121 DAGLAQ9Y4D2 1042 aa12.21□□□□□ -0.45
SMARCA1-201ENST00000371121 TCRBV5S1A1TA0A578 114 aa12.21□□□□□ -0.46
SMARCA1-201ENST00000371121 OPHN1O60890 802 aa12.21□□□□□ -0.46
SMARCA1-201ENST00000371121 EIF4BP23588 611 aaKnown RBP12.21□□□□□ -0.46
SMARCA1-201ENST00000371121 CTBSQ01459 385 aa12.21□□□□□ -0.46
SMARCA1-201ENST00000371121 PICALMQ13492 652 aa12.21□□□□□ -0.46
SMARCA1-201ENST00000371121 OGFRL1Q5TC84 451 aaPredicted RBP12.21□□□□□ -0.46
SMARCA1-201ENST00000371121 TICAM1Q8IUC6 712 aa12.21□□□□□ -0.46
SMARCA1-201ENST00000371121 TRIM42Q8IWZ5 723 aa12.21□□□□□ -0.46
SMARCA1-201ENST00000371121 C12orf56Q8IXR9 622 aa12.21□□□□□ -0.46
SMARCA1-201ENST00000371121 MARVELD2Q8N4S9 558 aa12.21□□□□□ -0.46
SMARCA1-201ENST00000371121 APOPT1Q96IL0 206 aa12.21□□□□□ -0.46
SMARCA1-201ENST00000371121 UNC45AQ9H3U1 944 aa12.21□□□□□ -0.46
SMARCA1-201ENST00000371121 KCNK4Q9NYG8 393 aa12.21□□□□□ -0.46
SMARCA1-201ENST00000371121 MARCOQ9UEW3 520 aaPredicted RBP12.21□□□□□ -0.46
SMARCA1-201ENST00000371121 CXorf49A8MYA2 514 aaPredicted RBP12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 LPXNO60711 386 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 RGS2P41220 211 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 GSTO1P78417 241 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 JAG1P78504 1218 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 USH1GQ495M9 461 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 GSTA5Q7RTV2 222 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 ZNF516Q92618 1163 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 ACAP3Q96P50 834 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 GCNAQ96QF7 691 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 TUFT1Q9NNX1 390 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 SIRPGQ9P1W8 387 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 TUBGCP4Q9UGJ1 667 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 CEPT1Q9Y6K0 416 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 ZNF646O15015 1829 aaPredicted RBP12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 COL6A2P12110 1019 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 AOC1P19801 751 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 MXI1P50539 228 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 MED21Q13503 144 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 MYBPC2Q14324 1141 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 GPATCH4Q5T3I0 446 aaKnown RBP12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 KBTBD6Q86V97 674 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 SLC35B2Q8TB61 432 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 GRIN3AQ8TCU5 1115 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 KLHL4Q9C0H6 718 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 SMYD2Q9NRG4 433 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 ARHGEF38Q9NXL2 777 aa12.2□□□□□ -0.46
SMARCA1-201ENST00000371121 SHOC2Q9UQ13 582 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 183.4 ms