RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 CRTAMO95727 393 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 RBP3P10745 1247 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 ITGALP20701 1170 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 PSEN1P49768 467 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 EFTUD2Q15029 972 aaKnown RBP eCLIP10.25□□□□□ -0.77
SCAF11-202ENST00000369367 CARNMT1Q8N4J0 409 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 ATXN3LQ9H3M9 355 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 YY1AP1Q9H869 796 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 SENP2Q9HC62 589 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 GPRC5CQ9NQ84 441 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 SNTG2Q9NY99 539 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 CAMTA1Q9Y6Y1 1673 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 VPS37AQ8NEZ2 397 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 PRPF18Q99633 342 aaKnown RBP10.25□□□□□ -0.77
SCAF11-202ENST00000369367 SCUBE2Q9NQ36 999 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 DRG1Q9Y295 367 aaKnown RBP10.25□□□□□ -0.77
SCAF11-202ENST00000369367 PHLPP1O60346 1717 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 FOXN1O15353 648 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 GRAP2O75791 330 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 CNTN2Q02246 1040 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 FAM9CQ8IZT9 166 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 OXCT2Q9BYC2 517 aaPredicted RBP10.25□□□□□ -0.77
SCAF11-202ENST00000369367 POMCP01189 267 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 RPL9P32969 192 aaKnown RBP10.25□□□□□ -0.77
SCAF11-202ENST00000369367 CTNNB1P35222 781 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 INPP1P49441 399 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 ANXA11P50995 505 aaKnown RBP10.25□□□□□ -0.77
SCAF11-202ENST00000369367 RHOAP61586 193 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 TGM3Q08188 693 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 NAA25Q14CX7 972 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 ZRANB3Q5FWF4 1079 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 PKN3Q6P5Z2 889 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 CXCL17Q6UXB2 119 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 CDR2LQ86X02 465 aaPredicted RBP10.25□□□□□ -0.77
SCAF11-202ENST00000369367 MTMR14Q8NCE2 650 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 IPMKQ8NFU5 416 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 USP33Q8TEY7 942 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 C1orf54Q8WWF1 131 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 STX18Q9P2W9 335 aaKnown RBP10.25□□□□□ -0.77
SCAF11-202ENST00000369367 LNPEPQ9UIQ6 1025 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 G3BP2Q9UN86 482 aaKnown RBP10.25□□□□□ -0.77
SCAF11-202ENST00000369367 RIC1Q4ADV7 1423 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 WDR91A4D1P6 747 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 SPECC1L-ADORA2AF8WAN1 911 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 PTPN21Q16825 1174 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 MDH1BQ5I0G3 518 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 HS6ST3Q8IZP7 471 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 CCDC138Q96M89 665 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 SMG5Q9UPR3 1016 aaKnown RBP10.25□□□□□ -0.77
SCAF11-202ENST00000369367 TARSL2A2RTX5 802 aaKnown RBP10.25□□□□□ -0.77
SCAF11-202ENST00000369367 PAEPP09466 180 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 SLC9A1P19634 815 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 UBA1P22314 1058 aaKnown RBP10.25□□□□□ -0.77
SCAF11-202ENST00000369367 EIF4BP23588 611 aaKnown RBP10.25□□□□□ -0.77
SCAF11-202ENST00000369367 GRK3P35626 688 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 ATP6V1E1P36543 226 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 AARSP49588 968 aaKnown RBP eCLIP10.25□□□□□ -0.77
SCAF11-202ENST00000369367 SGCGQ13326 291 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 POTEAQ6S8J7 498 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 OTOP1Q7RTM1 612 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 ADGRA1Q86SQ6 560 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 METTL3Q86U44 580 aaKnown RBP10.25□□□□□ -0.77
SCAF11-202ENST00000369367 CBWD2Q8IUF1 395 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 TRPM4Q8TD43 1214 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 GRAMD1AQ96CP6 724 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 NRBF2Q96F24 287 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 TBCBQ99426 244 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 INTS13Q9NVM9 706 aa10.25□□□□□ -0.77
SCAF11-202ENST00000369367 CST8O60676 142 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 ZMYND10O75800 440 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 FLT3LGP49771 235 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 RNF135Q8IUD6 432 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 BRSK2Q8IWQ3 736 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 ECT2Q9H8V3 914 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 PLAAQ9Y263 795 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 POLR2LP62875 67 aaKnown RBP10.24□□□□□ -0.77
SCAF11-202ENST00000369367 SLC7A5Q01650 507 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 CLMNQ96JQ2 1002 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 COL14A1Q05707 1796 aaKnown RBP10.24□□□□□ -0.77
SCAF11-202ENST00000369367 FRMD3A2A2Y4 597 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 CCDC22O60826 627 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 ESRRGP62508 458 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 PEX6Q13608 980 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 SPDYE7PQ495Y7 208 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 E4F1Q66K89 784 aaPredicted RBP10.24□□□□□ -0.77
SCAF11-202ENST00000369367 VGLL2Q8N8G2 317 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 PARD6BQ9BYG5 372 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 CELF4Q9BZC1 486 aaKnown RBP10.24□□□□□ -0.77
SCAF11-202ENST00000369367 DDX47Q9H0S4 455 aaKnown RBP10.24□□□□□ -0.77
SCAF11-202ENST00000369367 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.24□□□□□ -0.77
SCAF11-202ENST00000369367 FRMPD4Q14CM0 1322 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 CRYBB1P53674 252 aaPredicted RBP10.24□□□□□ -0.77
SCAF11-202ENST00000369367 SKP1P63208 163 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 PCSK7Q16549 785 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 TRIM65Q6PJ69 517 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 DDIASQ8IXT1 998 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 PDGFCQ9NRA1 345 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 CISHQ9NSE2 258 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 ANGPTL2Q9UKU9 493 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 SOAT2O75908 522 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms