RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 CCP110O43303 1012 aa5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 SKAP2O75563 359 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 GJB1P08034 283 aa5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 IFIT1P09914 478 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 ZNF853P0CG23 659 aa5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 SYN1P17600 705 aa5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 MAPK9P45984 424 aa5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 GJA9P57773 515 aa5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 IL13RA1P78552 427 aa5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 ADCY1Q08828 1119 aa5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 MRPL28Q13084 256 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 FSCN1Q16658 493 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 AMOTQ4VCS5 1084 aa5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 CXorf57Q6NSI4 855 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 IRGCQ6NXR0 463 aa5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 PKD1L2Q7Z442 2459 aa5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 GALNT5Q7Z7M9 940 aa5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 NKAPQ8N5F7 415 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 NAXEQ8NCW5 288 aa5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 RTL9Q8NET4 1388 aa5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 JADE3Q92613 823 aa5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 CEP95Q96GE4 821 aa5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 LCORQ96JN0 433 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 ACAP3Q96P50 834 aa5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 ANO3Q9BYT9 981 aa5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 TMEM168Q9H0V1 697 aa5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 PDCL3Q9H2J4 239 aa5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 NLRC4Q9NPP4 1024 aa5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 USP36Q9P275 1121 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 FTSJ1Q9UET6 329 aa5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 TCF20Q9UGU0 1960 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 GIT1Q9Y2X7 761 aa5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 TMX2Q9Y320 296 aa5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 ASB1Q9Y576 335 aa5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 PCDHGB3Q9Y5G1 929 aa5.61□□□□□ -1.51
ECHDC1-204ENST00000368292 BAHCC1Q9P281 2608 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 SYNDIG1LA6NDD5 238 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 F5H423 210 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 XPOTO43592 962 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 PRICKLE3O43900 615 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 B4GALT3O60512 393 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 CYP1A1P04798 512 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 CLEC2LP0C7M8 214 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 CCDC172P0C7W6 258 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 DESP17661 470 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 CAPN3P20807 821 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 SMARCA1P28370 1054 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 ATP6V1E1P36543 226 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 MANFP55145 182 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 MECOMQ03112 1051 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 WTAPQ15007 396 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 TNIP1Q15025 636 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 SAFBQ15424 915 aaKnown RBP eCLIP5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 CLUL1Q15846 466 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 CT83Q5H943 113 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 ZBTB41Q5SVQ8 909 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 Q6ZUG5 572 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 ELOA2Q8IYF1 753 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 KLHL36Q8N4N3 616 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 LSMEM1Q8N8F7 131 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 GSDMBQ8TAX9 411 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 C17orf50Q8WW18 174 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 RSAD2Q8WXG1 361 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 EAF2Q96CJ1 260 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 TEKT5Q96M29 485 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 MOGAT1Q96PD6 335 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 UIMC1Q96RL1 719 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 PTPN18Q99952 460 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 BTBD2Q9BX70 525 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 C1QTNF1Q9BXJ1 281 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 TTYH1Q9H313 450 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 POFUT1Q9H488 388 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 PRDM12Q9H4Q4 367 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 EPHX3Q9H6B9 360 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 ALG13Q9NP73 1137 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 ATP8A2Q9NTI2 1148 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 SMC4Q9NTJ3 1288 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 ANKEF1Q9NU02 776 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 TBC1D22BQ9NU19 505 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 RTEL1Q9NZ71 1219 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 ZBTB21Q9ULJ3 1066 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 PHTF1Q9UMS5 762 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 FZD1Q9UP38 647 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 MRFAP1Q9Y605 127 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 CFAP54Q96N23 3096 aa5.6□□□□□ -1.51
ECHDC1-204ENST00000368292 COL3A1P02461 1466 aaPredicted RBP5.59□□□□□ -1.51
ECHDC1-204ENST00000368292 KIF7Q2M1P5 1343 aa5.59□□□□□ -1.51
ECHDC1-204ENST00000368292 KRTAP4-8A0A0G2JLE6 195 aa5.59□□□□□ -1.51
ECHDC1-204ENST00000368292 PRSS38A1L453 326 aa5.59□□□□□ -1.51
ECHDC1-204ENST00000368292 GOLGA6L3A6NEY3 463 aa5.59□□□□□ -1.51
ECHDC1-204ENST00000368292 MANSC4A6NHS7 340 aaPredicted RBP5.59□□□□□ -1.51
ECHDC1-204ENST00000368292 TSPY2A6NKD2 308 aa5.59□□□□□ -1.51
ECHDC1-204ENST00000368292 KRTAP9-7A8MTY7 169 aa5.59□□□□□ -1.51
ECHDC1-204ENST00000368292 H0Y858 1186 aa5.59□□□□□ -1.51
ECHDC1-204ENST00000368292 GFPT2O94808 682 aa5.59□□□□□ -1.51
ECHDC1-204ENST00000368292 KIF20AO95235 890 aa5.59□□□□□ -1.51
ECHDC1-204ENST00000368292 MBD4O95243 580 aa5.59□□□□□ -1.51
ECHDC1-204ENST00000368292 TSPY3P0CV98 308 aa5.59□□□□□ -1.51
ECHDC1-204ENST00000368292 TSPY8P0CW00 308 aa5.59□□□□□ -1.51
ECHDC1-204ENST00000368292 CCL5P13501 91 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms