RNA–Protein interactions for RNA: ENST00000215794.7

USP18-201, Transcript of ubiquitin specific peptidase 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP18, Length 2,129 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP18-201ENST00000215794 PCDH10Q9P2E7 1040 aa19.1■□□□□ 0.65
USP18-201ENST00000215794 RSPH14Q9UHP6 348 aa19.1■□□□□ 0.65
USP18-201ENST00000215794 CITO14578 2027 aa19.1■□□□□ 0.65
USP18-201ENST00000215794 RIPK2O43353 540 aa19.1■□□□□ 0.65
USP18-201ENST00000215794 GAS8O95995 478 aa19.1■□□□□ 0.65
USP18-201ENST00000215794 KRT3P12035 628 aa19.1■□□□□ 0.65
USP18-201ENST00000215794 PSMA2P25787 234 aa19.1■□□□□ 0.65
USP18-201ENST00000215794 HOXC8P31273 242 aa19.1■□□□□ 0.65
USP18-201ENST00000215794 ATICP31939 592 aa19.1■□□□□ 0.65
USP18-201ENST00000215794 PIGHQ14442 188 aaPredicted RBP19.1■□□□□ 0.65
USP18-201ENST00000215794 XYLT1Q86Y38 959 aa19.1■□□□□ 0.65
USP18-201ENST00000215794 RCOR2Q8IZ40 523 aa19.1■□□□□ 0.65
USP18-201ENST00000215794 ARFGAP1Q8N6T3 406 aa19.1■□□□□ 0.65
USP18-201ENST00000215794 HAUS1Q96CS2 278 aa19.1■□□□□ 0.65
USP18-201ENST00000215794 METTL5Q9NRN9 209 aaKnown RBP19.1■□□□□ 0.65
USP18-201ENST00000215794 CWC15Q9P013 229 aaKnown RBP19.1■□□□□ 0.65
USP18-201ENST00000215794 STRIP2Q9ULQ0 834 aa19.1■□□□□ 0.65
USP18-201ENST00000215794 MOXD2PA6NHM9 499 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 M0QYV0 167 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 CTSHP09668 335 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 RARGP13631 454 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 ATF2P15336 505 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 HOXA11P31270 313 aaPredicted RBP19.09■□□□□ 0.65
USP18-201ENST00000215794 LSP1P33241 339 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 MDH1P40925 334 aaKnown RBP19.09■□□□□ 0.65
USP18-201ENST00000215794 NDST1P52848 882 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 ATN1P54259 1190 aaPredicted RBP19.09■□□□□ 0.65
USP18-201ENST00000215794 TAP1Q03518 808 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 SMTNL2Q2TAL5 461 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 ODF2Q5BJF6 829 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 SPOCD1Q6ZMY3 1216 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 ZNF410Q86VK4 478 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 NIPA2Q8N8Q9 360 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 UBA3Q8TBC4 463 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 RBM41Q96IZ5 413 aaKnown RBP19.09■□□□□ 0.65
USP18-201ENST00000215794 HEXIM2Q96MH2 286 aaKnown RBP19.09■□□□□ 0.65
USP18-201ENST00000215794 OSMRQ99650 979 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 DDX23Q9BUQ8 820 aaKnown RBP19.09■□□□□ 0.65
USP18-201ENST00000215794 EIF2AQ9BY44 585 aaKnown RBP19.09■□□□□ 0.65
USP18-201ENST00000215794 TRPV6Q9H1D0 765 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 SYNCQ9H7C4 482 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 SNTG2Q9NY99 539 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 OGDHLQ9ULD0 1010 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.09■□□□□ 0.65
USP18-201ENST00000215794 C2CD2Q9Y426 696 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 HES2Q9Y543 173 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 TRIP11Q15643 1979 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 TLDC2A0PJX2 215 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 LRRD1A4D1F6 860 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 SIGLEC16A6NMB1 481 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 PIK3R2O00459 728 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 PPEF2O14830 753 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 CYP3A5P20815 502 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 ADCY8P40145 1251 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 SLMAPQ14BN4 828 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 PTGISQ16647 500 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 SYDE1Q6ZW31 735 aaPredicted RBP19.09■□□□□ 0.65
USP18-201ENST00000215794 GLIS1Q8NBF1 620 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 EPS8L3Q8TE67 593 aaKnown RBP19.09■□□□□ 0.65
USP18-201ENST00000215794 ZMAT2Q96NC0 199 aaKnown RBP19.09■□□□□ 0.65
USP18-201ENST00000215794 CDC42EP4Q9H3Q1 356 aaKnown RBP19.09■□□□□ 0.65
USP18-201ENST00000215794 ZWILCHQ9H900 591 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 SLC12A6Q9UHW9 1150 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 ITGA11Q9UKX5 1188 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 DNPEPQ9ULA0 475 aa19.09■□□□□ 0.65
USP18-201ENST00000215794 GPR32O75388 356 aa19.08■□□□□ 0.64
USP18-201ENST00000215794 ITIH2P19823 946 aa19.08■□□□□ 0.64
USP18-201ENST00000215794 IL1R2P27930 398 aa19.08■□□□□ 0.64
USP18-201ENST00000215794 GRM5P41594 1212 aa19.08■□□□□ 0.64
USP18-201ENST00000215794 SLC25A11Q02978 314 aaKnown RBP19.08■□□□□ 0.64
USP18-201ENST00000215794 KCNT1Q5JUK3 1230 aa19.08■□□□□ 0.64
USP18-201ENST00000215794 LRRC38Q5VT99 294 aa19.08■□□□□ 0.64
USP18-201ENST00000215794 ARMC5Q96C12 935 aa19.08■□□□□ 0.64
USP18-201ENST00000215794 SENP6Q9GZR1 1112 aaPredicted RBP19.08■□□□□ 0.64
USP18-201ENST00000215794 CYP3A43Q9HB55 503 aa19.08■□□□□ 0.64
USP18-201ENST00000215794 hCG_1818297A0A087WSY0 165 aa19.07■□□□□ 0.64
USP18-201ENST00000215794 DNM1LO00429 736 aa19.07■□□□□ 0.64
USP18-201ENST00000215794 LIASO43766 372 aa19.07■□□□□ 0.64
USP18-201ENST00000215794 LRCH4O75427 683 aa19.07■□□□□ 0.64
USP18-201ENST00000215794 GPD2P43304 727 aa19.07■□□□□ 0.64
USP18-201ENST00000215794 SLCO1A2P46721 670 aa19.07■□□□□ 0.64
USP18-201ENST00000215794 CCT5P48643 541 aa19.07■□□□□ 0.64
USP18-201ENST00000215794 MNX1P50219 401 aaPredicted RBP19.07■□□□□ 0.64
USP18-201ENST00000215794 PPP2R2AP63151 447 aa19.07■□□□□ 0.64
USP18-201ENST00000215794 RBP5P82980 135 aa19.07■□□□□ 0.64
USP18-201ENST00000215794 KYAT1Q16773 422 aa19.07■□□□□ 0.64
USP18-201ENST00000215794 HOOK3Q86VS8 718 aa19.07■□□□□ 0.64
USP18-201ENST00000215794 TMEM40Q8WWA1 233 aa19.07■□□□□ 0.64
USP18-201ENST00000215794 TLCD1Q96CP7 247 aa19.07■□□□□ 0.64
USP18-201ENST00000215794 FAXDC2Q96IV6 333 aa19.07■□□□□ 0.64
USP18-201ENST00000215794 TSEN34Q9BSV6 310 aaKnown RBP19.07■□□□□ 0.64
USP18-201ENST00000215794 OSBPL7Q9BZF2 842 aa19.07■□□□□ 0.64
USP18-201ENST00000215794 MCOLN1Q9GZU1 580 aa19.07■□□□□ 0.64
USP18-201ENST00000215794 HOMER3Q9NSC5 361 aa19.07■□□□□ 0.64
USP18-201ENST00000215794 PHF24Q9UPV7 400 aa19.07■□□□□ 0.64
USP18-201ENST00000215794 SMIM35A0A1B0GVV1 85 aa19.07■□□□□ 0.64
USP18-201ENST00000215794 GNAT1P11488 350 aa19.07■□□□□ 0.64
USP18-201ENST00000215794 P4HA1P13674 534 aa19.07■□□□□ 0.64
USP18-201ENST00000215794 CDKN2BP42772 138 aa19.07■□□□□ 0.64
USP18-201ENST00000215794 GLRA4Q5JXX5 417 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms