RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 XiapQ60989 496 aa6.56□□□□□ -1.36
Lig4-202ENSMUST00000170033 Laptm5Q61168 261 aa6.56□□□□□ -1.36
Lig4-202ENSMUST00000170033 Birc2Q62210 612 aa6.56□□□□□ -1.36
Lig4-202ENSMUST00000170033 Capn3Q64691 821 aa6.56□□□□□ -1.36
Lig4-202ENSMUST00000170033 Fam126aQ6P9N1 521 aa6.56□□□□□ -1.36
Lig4-202ENSMUST00000170033 Tmc8Q7TN58 722 aa6.56□□□□□ -1.36
Lig4-202ENSMUST00000170033 Spata21Q8BHW6 681 aa6.56□□□□□ -1.36
Lig4-202ENSMUST00000170033 Kctd2Q8CEZ0 266 aa6.56□□□□□ -1.36
Lig4-202ENSMUST00000170033 Erich5Q8K0S2 362 aa6.56□□□□□ -1.36
Lig4-202ENSMUST00000170033 Il36gQ8R460 164 aa6.56□□□□□ -1.36
Lig4-202ENSMUST00000170033 Nmrk1Q91W63 195 aa6.56□□□□□ -1.36
Lig4-202ENSMUST00000170033 Dnajc9Q91WN1 259 aaKnown RBP6.56□□□□□ -1.36
Lig4-202ENSMUST00000170033 Cdk5rap3Q99LM2 503 aa6.56□□□□□ -1.36
Lig4-202ENSMUST00000170033 Slc12a9Q99MR3 914 aa6.56□□□□□ -1.36
Lig4-202ENSMUST00000170033 Trem2Q99NH8 227 aa6.56□□□□□ -1.36
Lig4-202ENSMUST00000170033 Tsnaxip1Q99P25 704 aa6.56□□□□□ -1.36
Lig4-202ENSMUST00000170033 Golph3Q9CRA5 298 aa6.56□□□□□ -1.36
Lig4-202ENSMUST00000170033 Mcur1Q9CXD6 340 aa6.56□□□□□ -1.36
Lig4-202ENSMUST00000170033 Dnajc18Q9CZJ9 357 aa6.56□□□□□ -1.36
Lig4-202ENSMUST00000170033 Ubxn11Q9D572 484 aa6.56□□□□□ -1.36
Lig4-202ENSMUST00000170033 Acsl4Q9QUJ7 711 aa6.56□□□□□ -1.36
Lig4-202ENSMUST00000170033 Coro1bQ9WUM3 484 aaKnown RBP6.56□□□□□ -1.36
Lig4-202ENSMUST00000170033 Slc7a5Q9Z127 512 aa6.56□□□□□ -1.36
Lig4-202ENSMUST00000170033 NinQ61043 2035 aa6.56□□□□□ -1.36
Lig4-202ENSMUST00000170033 Tnfrsf14A0A1W2P7D5 276 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Sh2d4bA6X942 431 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Clca3bE9PUL3 1044 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Vmn2r59E9PUT5 865 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Zfp839E9PUU5 921 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Olfr552E9Q545 317 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Pcdh9F8VPK8 1237 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Zfp846G3X996 541 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gm8926L7MUE8 181 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Rtn2O70622 471 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Wnt10bP48614 389 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Rad54lP70270 747 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Arhgap17Q3UIA2 846 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Cnga4Q3UW12 575 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Ttc9Q3V038 219 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gm11437Q5QR91 290 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Ppp1r14bQ62084 147 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Sema5aQ62217 1077 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 N4bp1Q6A037 893 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Chsy1Q6ZQ11 800 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Fbxo10Q7TQF2 950 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Dnali1Q8BVN8 258 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 AgpsQ8C0I1 645 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 N4bp3Q8C7U1 537 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Polr2bQ8CFI7 1174 aaKnown RBP6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Ago2Q8CJG0 860 aaKnown RBP6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Spag16Q8K450 639 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Slc18a1Q8R090 521 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Mat1aQ91X83 396 aaKnown RBP6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Ogfod2Q9CQ04 349 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Polr3cQ9D483 533 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Slc25a19Q9DAM5 318 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Ropn1Q9ESG2 212 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Slc22a3Q9WTW5 551 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Smchd1Q6P5D8 2007 aaKnown RBP6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Slc6a16A0A1L1SR47 742 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 MipepA6H611 711 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Spata31d1dE9Q5W2 1247 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 E2f6O54917 272 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Tlk2O55047 718 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Nptx2O70340 429 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 IkbkgO88522 412 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 PrlP06879 226 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Icam1P13597 537 aaKnown RBP6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gjb3P28231 270 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 FerP70451 823 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 CiitaP79621 1155 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Grm2Q14BI2 872 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Drc1Q3USS3 753 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Ubn1Q4G0F8 1135 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Parp6Q6P6P7 630 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Senp6Q6P7W0 1132 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Znf507Q6ZPY5 941 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Kcng4Q80XM3 506 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Alkbh8Q80Y20 664 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Znf76Q8BMU0 568 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Rmdn2Q8BSE0 410 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Snx8Q8CFD4 459 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Dpp3Q99KK7 738 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Rassf1Q99MK9 340 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Thap12Q9CUX1 758 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Med7Q9CZB6 233 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Fam90a1bQ9D4F3 419 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Wdr83Q9DAJ4 315 aaKnown RBP6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gdap2Q9DBL2 498 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Nudt12Q9DCN1 462 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Plod3Q9R0E1 741 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Krt71Q9R0H5 524 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Adam23Q9R1V7 829 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Atp6v1g2Q9WTT4 118 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Tnfsf13bQ9WU72 309 aa6.55□□□□□ -1.36
Lig4-202ENSMUST00000170033 Cntnap4Q99P47 1310 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Oip5A2AQ14 241 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gm6583E9Q8Z1 469 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 UgcgO88693 394 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 VimP20152 466 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms