RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 TOR2P32600 2474 aaKnown RBP-3.05□□□□□ -2.9
snR47snR47 HYM1P32464 399 aa-3.06□□□□□ -2.9
snR47snR47 YER121WP40076 114 aa-3.06□□□□□ -2.9
snR47snR47 HPM1P40481 377 aa-3.06□□□□□ -2.9
snR47snR47 ATP19P81451 68 aa-3.06□□□□□ -2.9
snR47snR47 PET117Q02771 107 aa-3.06□□□□□ -2.9
snR47snR47 SHH4Q06236 168 aa-3.06□□□□□ -2.9
snR47snR47 ADK1P07170 222 aaKnown RBP-3.07□□□□□ -2.9
snR47snR47 FYV5P25585 152 aa-3.07□□□□□ -2.9
snR47snR47 RFA3P26755 122 aaKnown RBP-3.07□□□□□ -2.9
snR47snR47 SFT2P38166 215 aa-3.07□□□□□ -2.9
snR47snR47 FMP32P43557 207 aa-3.07□□□□□ -2.9
snR47snR47 RAD17P48581 401 aa-3.07□□□□□ -2.9
snR47snR47 YGL193CP53097 103 aa-3.07□□□□□ -2.9
snR47snR47 SCS22Q6Q595 175 aa-3.07□□□□□ -2.9
snR47snR47 PET20Q99373 253 aa-3.07□□□□□ -2.9
snR47snR47 GCN1P33892 2672 aaKnown RBP-3.08□□□□□ -2.9
snR47snR47 RAV2Q03956 351 aa-3.08□□□□□ -2.9
snR47snR47 HKR1P41809 1802 aa-3.08□□□□□ -2.9
snR47snR47 AIM18P38884 321 aa-3.09□□□□□ -2.9
snR47snR47 RTC6O14464 93 aa-3.1□□□□□ -2.91
snR47snR47 GSP1P32835 219 aaKnown RBP-3.1□□□□□ -2.91
snR47snR47 FIG1P38224 298 aa-3.1□□□□□ -2.91
snR47snR47 NAT5Q08689 176 aa-3.1□□□□□ -2.91
snR47snR47 YGL041C-BQ3E750 60 aa-3.1□□□□□ -2.91
snR47snR47 MDN1Q12019 4910 aaKnown RBP-3.1□□□□□ -2.91
snR47snR47 PHB1P40961 287 aa-3.11□□□□□ -2.91
snR47snR47 YGL149WP53116 101 aa-3.11□□□□□ -2.91
snR47snR47 YDR381C-AQ3E6R5 114 aa-3.11□□□□□ -2.91
snR47snR47 ECM5Q03214 1411 aa-3.11□□□□□ -2.91
snR47snR47 PRS3P38689 320 aaKnown RBP-3.13□□□□□ -2.91
snR47snR47 YGR017WP53210 297 aa-3.13□□□□□ -2.91
snR47snR47 HPT1Q04178 221 aaKnown RBP-3.13□□□□□ -2.91
snR47snR47 NOC4Q06512 552 aaPredicted RBP-3.13□□□□□ -2.91
snR47snR47 TY1B-BLQ12490 1755 aa-3.14□□□□□ -2.91
snR47snR47 RPS1BP23248 255 aaKnown RBP-3.14□□□□□ -2.91
snR47snR47 RPS1AP33442 255 aaKnown RBP-3.14□□□□□ -2.91
snR47snR47 YER085CP40058 173 aa-3.14□□□□□ -2.91
snR47snR47 RPS11AP0CX47 156 aaKnown RBP-3.15□□□□□ -2.91
snR47snR47 RPS11BP0CX48 156 aaKnown RBP-3.15□□□□□ -2.91
snR47snR47 TAH1P25638 111 aaPredicted RBP-3.15□□□□□ -2.91
snR47snR47 YUH1P35127 236 aa-3.15□□□□□ -2.91
snR47snR47 NHP6BP11633 99 aaKnown RBP-3.16□□□□□ -2.92
snR47snR47 TRX3P25372 127 aa-3.16□□□□□ -2.92
snR47snR47 SHU1P38751 150 aa-3.16□□□□□ -2.92
snR47snR47 SEC72P39742 193 aaKnown RBP-3.17□□□□□ -2.92
snR47snR47 RPC10P40422 70 aa-3.17□□□□□ -2.92
snR47snR47 YRF1-2P40105 1681 aa-3.17□□□□□ -2.92
snR47snR47 RPL22AP05749 121 aaKnown RBP-3.18□□□□□ -2.92
snR47snR47 ARG80P07249 177 aa-3.18□□□□□ -2.92
snR47snR47 YAP3P38749 330 aa-3.18□□□□□ -2.92
snR47snR47 BRP1P53194 125 aa-3.18□□□□□ -2.92
snR47snR47 YCL012CQ8J0M4 134 aa-3.18□□□□□ -2.92
snR47snR47 HTB1P02293 131 aaKnown RBP-3.19□□□□□ -2.92
snR47snR47 HTB2P02294 131 aa-3.19□□□□□ -2.92
snR47snR47 ATP5P09457 212 aa-3.19□□□□□ -2.92
snR47snR47 HAP3P13434 144 aa-3.19□□□□□ -2.92
snR47snR47 NVJ1P38881 321 aa-3.19□□□□□ -2.92
snR47snR47 SPG1P50088 95 aa-3.19□□□□□ -2.92
snR47snR47 PKR1Q03880 122 aaKnown RBP-3.19□□□□□ -2.92
snR47snR47 SOM1Q05676 74 aa-3.19□□□□□ -2.92
snR47snR47 YIL086CP40503 102 aa-3.2□□□□□ -2.92
snR47snR47 TMA20P89886 181 aaPredicted RBP-3.2□□□□□ -2.92
snR47snR47 RRT7Q07829 113 aa-3.2□□□□□ -2.92
snR47snR47 PEX11Q12462 236 aa-3.2□□□□□ -2.92
snR47snR47 YJR107C-AP0CT86 78 aa-3.21□□□□□ -2.92
snR47snR47 YKR041WP36134 250 aa-3.22□□□□□ -2.92
snR47snR47 YAL064WP39711 94 aa-3.22□□□□□ -2.92
snR47snR47 YET3Q07451 203 aa-3.22□□□□□ -2.92
snR47snR47 DYN1P36022 4092 aa-3.23□□□□□ -2.93
snR47snR47 UBI4P0CG63 381 aaKnown RBP-3.23□□□□□ -2.93
snR47snR47 YHR050W-AQ05451 56 aa-3.23□□□□□ -2.93
snR47snR47 YJL218WP40892 196 aaKnown RBP-3.24□□□□□ -2.93
snR47snR47 YLR046CQ12253 270 aa-3.24□□□□□ -2.93
snR47snR47 TRR1P29509 319 aaKnown RBP-3.25□□□□□ -2.93
snR47snR47 GRX8Q05926 109 aa-3.25□□□□□ -2.93
snR47snR47 RAF1Q06891 181 aa-3.25□□□□□ -2.93
snR47snR47 JAC1P53193 184 aa-3.26□□□□□ -2.93
snR47snR47 YPK9Q12697 1472 aa-3.27□□□□□ -2.93
snR47snR47 RPL36BO14455 100 aaKnown RBP-3.27□□□□□ -2.93
snR47snR47 QCR7P00128 127 aa-3.27□□□□□ -2.93
snR47snR47 RPL36AP05745 100 aaPredicted RBP-3.27□□□□□ -2.93
snR47snR47 QCR2P07257 368 aa-3.27□□□□□ -2.93
snR47snR47 MRPL44P19956 98 aa-3.27□□□□□ -2.93
snR47snR47 YKL044WP36092 106 aa-3.27□□□□□ -2.93
snR47snR47 CYB5P40312 120 aa-3.28□□□□□ -2.93
snR47snR47 YPL261CQ08976 102 aa-3.28□□□□□ -2.93
snR47snR47 YLR285C-AQ3E771 56 aa-3.28□□□□□ -2.93
snR47snR47 MRPL38P35996 138 aaPredicted RBP-3.29□□□□□ -2.94
snR47snR47 MPC2P38857 129 aa-3.29□□□□□ -2.94
snR47snR47 YNL140CP53910 189 aa-3.29□□□□□ -2.94
snR47snR47 DDP1Q99321 188 aaKnown RBP-3.29□□□□□ -2.94
snR47snR47 CAT8P39113 1433 aa-3.29□□□□□ -2.94
snR47snR47 HSP10P38910 106 aa-3.3□□□□□ -2.94
snR47snR47 MRPS17Q03246 237 aaPredicted RBP-3.3□□□□□ -2.94
snR47snR47 YOR097CQ12274 175 aaPredicted RBP-3.3□□□□□ -2.94
snR47snR47 TOP2P06786 1428 aaKnown RBP-3.3□□□□□ -2.94
snR47snR47 EGD2P38879 174 aaKnown RBP-3.31□□□□□ -2.94
snR47snR47 ORM1P53224 222 aa-3.31□□□□□ -2.94
snR47snR47 YPD1Q07688 167 aa-3.32□□□□□ -2.94
Retrieved 100 of 5,963 RNA–protein pairs in 47.8 ms