RNA–Protein interactions for RNA: YPL230W

USV1, Transcript of Putative transcription factor containing a C2H2 zinc finger, yeastyeast

Gene USV1, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USV1YPL230W YEL008WP40001 126 aa2.17□□□□□ -2.06
USV1YPL230W YFL065CP43539 102 aa2.17□□□□□ -2.06
USV1YPL230W YGL230CP53074 147 aa2.17□□□□□ -2.06
USV1YPL230W YGL149WP53116 101 aa2.17□□□□□ -2.06
USV1YPL230W AVO2Q04749 426 aa2.17□□□□□ -2.06
USV1YPL230W YLR042CQ07990 161 aa2.17□□□□□ -2.06
USV1YPL230W MHF1Q3E835 90 aa2.17□□□□□ -2.06
USV1YPL230W KIN28P06242 306 aa2.16□□□□□ -2.06
USV1YPL230W GAT4P40569 121 aa2.16□□□□□ -2.06
USV1YPL230W CDC39P25655 2108 aaKnown RBP2.15□□□□□ -2.06
USV1YPL230W HSP150P32478 413 aa2.15□□□□□ -2.07
USV1YPL230W LHP1P33399 275 aaKnown RBP2.15□□□□□ -2.07
USV1YPL230W ECM31P38122 312 aa2.15□□□□□ -2.07
USV1YPL230W IPT1P38954 527 aa2.15□□□□□ -2.07
USV1YPL230W COA3Q3E7B2 85 aa2.15□□□□□ -2.07
USV1YPL230W FUN14P18411 198 aa2.14□□□□□ -2.07
USV1YPL230W SEC59P20048 519 aa2.14□□□□□ -2.07
USV1YPL230W PRE1P22141 198 aaKnown RBP2.14□□□□□ -2.07
USV1YPL230W YPL067CQ02754 198 aa2.14□□□□□ -2.07
USV1YPL230W YER137CP40083 148 aaKnown RBP2.13□□□□□ -2.07
USV1YPL230W DCV1P43595 202 aa2.13□□□□□ -2.07
USV1YPL230W ERV14P53173 138 aa2.13□□□□□ -2.07
USV1YPL230W HAP3P13434 144 aa2.12□□□□□ -2.07
USV1YPL230W SNF11P38956 169 aa2.12□□□□□ -2.07
USV1YPL230W RGI1P40043 161 aaPredicted RBP2.12□□□□□ -2.07
USV1YPL230W RTR2Q12378 196 aa2.12□□□□□ -2.07
USV1YPL230W YOR376W-AQ3E805 51 aa2.12□□□□□ -2.07
USV1YPL230W FPR1P20081 114 aaKnown RBP2.11□□□□□ -2.07
USV1YPL230W YKL044WP36092 106 aa2.11□□□□□ -2.07
USV1YPL230W SRL3P36167 246 aa2.11□□□□□ -2.07
USV1YPL230W ATG8P38182 117 aaRIP-Chip data2.11□□□□□ -2.07not detected
USV1YPL230W PAM16P42949 149 aa2.11□□□□□ -2.07
USV1YPL230W YFL051CP43552 160 aa2.11□□□□□ -2.07
USV1YPL230W MYO2P19524 1574 aaKnown RBP2.1□□□□□ -2.07
USV1YPL230W ACC1Q00955 2233 aaKnown RBP2.1□□□□□ -2.07
USV1YPL230W PAU21P0CE86 164 aa2.1□□□□□ -2.07
USV1YPL230W PAU22P0CE87 164 aa2.1□□□□□ -2.07
USV1YPL230W HYP2P23301 157 aaKnown RBP2.1□□□□□ -2.07
USV1YPL230W MRPL15P36523 253 aa2.1□□□□□ -2.07
USV1YPL230W YBR027CP38220 110 aa2.1□□□□□ -2.07
USV1YPL230W YAR029WP39549 74 aa2.1□□□□□ -2.07
USV1YPL230W BAT2P47176 376 aaKnown RBP2.1□□□□□ -2.07
USV1YPL230W BRP1P53194 125 aa2.1□□□□□ -2.07
USV1YPL230W YPR203WQ08994 102 aa2.1□□□□□ -2.07
USV1YPL230W YCR099CP25657 155 aa2.09□□□□□ -2.07
USV1YPL230W MRPL11P36521 249 aaPredicted RBP2.09□□□□□ -2.07
USV1YPL230W GPI19Q04082 140 aa2.09□□□□□ -2.07
USV1YPL230W YOR097CQ12274 175 aaPredicted RBP2.09□□□□□ -2.07
USV1YPL230W GTT2Q12390 233 aa2.09□□□□□ -2.07
USV1YPL230W UBR2Q07963 1872 aa2.08□□□□□ -2.08
USV1YPL230W RPL36BO14455 100 aaKnown RBP2.08□□□□□ -2.08
USV1YPL230W RPL36AP05745 100 aaPredicted RBP2.08□□□□□ -2.08
USV1YPL230W YCL042WP25572 119 aa2.08□□□□□ -2.08
USV1YPL230W TDA2P40045 126 aa2.08□□□□□ -2.08
USV1YPL230W FYV7Q12247 151 aa2.08□□□□□ -2.08
USV1YPL230W BEM2P39960 2167 aaKnown RBP2.08□□□□□ -2.08
USV1YPL230W YER039C-AP0CD97 72 aa2.07□□□□□ -2.08
USV1YPL230W RPS12P48589 143 aaKnown RBP2.07□□□□□ -2.08
USV1YPL230W FIT1Q04433 528 aa2.07□□□□□ -2.08
USV1YPL230W UTP11P34247 250 aaPredicted RBP2.06□□□□□ -2.08
USV1YPL230W SPP41P38904 1435 aa2.06□□□□□ -2.08
USV1YPL230W GSP1P32835 219 aaKnown RBP2.05□□□□□ -2.08
USV1YPL230W YFR035CP43608 114 aa2.05□□□□□ -2.08
USV1YPL230W VAM10Q08474 114 aa2.05□□□□□ -2.08
USV1YPL230W YGL014C-AP0C5N1 53 aa2.04□□□□□ -2.08
USV1YPL230W RPL40AP0CH08 128 aaKnown RBP2.04□□□□□ -2.08
USV1YPL230W RPL40BP0CH09 128 aaKnown RBP2.04□□□□□ -2.08
USV1YPL230W YHR213WP0CI67 198 aa2.04□□□□□ -2.08
USV1YPL230W SEN15Q04675 128 aa2.04□□□□□ -2.08
USV1YPL230W YLR296WQ05898 108 aa2.04□□□□□ -2.08
USV1YPL230W YPL225WQ08971 146 aaKnown RBP2.04□□□□□ -2.08
USV1YPL230W VAR1P02381 398 aa2.03□□□□□ -2.08
USV1YPL230W RPL33AP05744 107 aaKnown RBP2.03□□□□□ -2.08
USV1YPL230W AQY2P0CD90 149 aa2.03□□□□□ -2.08
USV1YPL230W YHL037CP38733 133 aa2.03□□□□□ -2.08
USV1YPL230W AIM18P38884 321 aa2.03□□□□□ -2.08
USV1YPL230W LST8P41318 303 aa2.03□□□□□ -2.08
USV1YPL230W SED1Q01589 338 aa2.03□□□□□ -2.08
USV1YPL230W HPA2Q06592 156 aa2.03□□□□□ -2.08
USV1YPL230W RTC6O14464 93 aa2.02□□□□□ -2.09
USV1YPL230W PFY1P07274 126 aa2.02□□□□□ -2.09
USV1YPL230W YHR130CP38834 111 aa2.02□□□□□ -2.09
USV1YPL230W YMR122CQ03879 124 aa2.02□□□□□ -2.09
USV1YPL230W HSL1P34244 1518 aa2.01□□□□□ -2.09
USV1YPL230W RIF1P29539 1916 aa2.01□□□□□ -2.09
USV1YPL230W PAU12P53343 120 aa2.01□□□□□ -2.09
USV1YPL230W YLR365WQ7LIF2 110 aa2.01□□□□□ -2.09
USV1YPL230W MED11Q99278 115 aa2.01□□□□□ -2.09
USV1YPL230W GNA1P43577 159 aaPredicted RBP2□□□□□ -2.09
USV1YPL230W YIL014C-AQ02598 104 aa2□□□□□ -2.09
USV1YPL230W YLR194CQ05777 254 aa2□□□□□ -2.09
USV1YPL230W YPL261CQ08976 102 aa2□□□□□ -2.09
USV1YPL230W DAD1Q12248 94 aa2□□□□□ -2.09
USV1YPL230W OCA6Q12454 224 aa2□□□□□ -2.09
USV1YPL230W SNT2P53127 1403 aa2□□□□□ -2.09
USV1YPL230W YHR212W-AP0CX91 67 aa1.99□□□□□ -2.09
USV1YPL230W EMP24P32803 203 aaKnown RBP1.99□□□□□ -2.09
USV1YPL230W YGR164WP53291 111 aa1.99□□□□□ -2.09
USV1YPL230W ZEO1Q08245 113 aa1.99□□□□□ -2.09
USV1YPL230W YMR103CQ04436 120 aa1.98□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms