RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C TY1B-ML1Q04711 1755 aaKnown RBP-0.08□□□□□ -2.42
NIP100YPL174C TY1B-LR1Q12088 1755 aaKnown RBP-0.08□□□□□ -2.42
NIP100YPL174C TY1B-NL1Q12112 1755 aa-0.08□□□□□ -2.42
NIP100YPL174C TY1B-GR1Q12141 1755 aa-0.08□□□□□ -2.42
NIP100YPL174C TY1B-GR2Q12269 1755 aa-0.08□□□□□ -2.42
NIP100YPL174C TY1B-OLQ12273 1755 aa-0.08□□□□□ -2.42
NIP100YPL174C TY1B-GR3Q12316 1755 aa-0.08□□□□□ -2.42
NIP100YPL174C TY1B-PLQ12414 1755 aaKnown RBP-0.08□□□□□ -2.42
NIP100YPL174C TY1B-BLQ12490 1755 aa-0.08□□□□□ -2.42
NIP100YPL174C TY1B-ORQ92393 1755 aa-0.08□□□□□ -2.42
NIP100YPL174C SOL1P50278 321 aa-0.09□□□□□ -2.42
NIP100YPL174C JAC1P53193 184 aa-0.09□□□□□ -2.42
NIP100YPL174C SYM1Q06563 197 aa-0.09□□□□□ -2.42
NIP100YPL174C PMD1P32634 1753 aa-0.09□□□□□ -2.42
NIP100YPL174C MEC1P38111 2368 aa-0.09□□□□□ -2.42
NIP100YPL174C HSP150P32478 413 aa-0.09□□□□□ -2.42
NIP100YPL174C NUF2P33895 451 aa-0.09□□□□□ -2.42
NIP100YPL174C CPR5P35176 225 aa-0.09□□□□□ -2.42
NIP100YPL174C FYV4P38783 130 aaPredicted RBP-0.09□□□□□ -2.42
NIP100YPL174C YEL028WP39989 153 aa-0.09□□□□□ -2.42
NIP100YPL174C PAC10P48363 199 aa-0.09□□□□□ -2.42
NIP100YPL174C PLP1Q04004 230 aa-0.09□□□□□ -2.42
NIP100YPL174C SRP102P36057 244 aaPredicted RBP-0.1□□□□□ -2.42
NIP100YPL174C SNO1Q03144 224 aa-0.1□□□□□ -2.42
NIP100YPL174C NUP170P38181 1502 aa-0.1□□□□□ -2.43
NIP100YPL174C TY4B-HP0C2J7 1802 aa-0.1□□□□□ -2.43
NIP100YPL174C NVJ1P38881 321 aa-0.1□□□□□ -2.43
NIP100YPL174C IRC21Q04772 201 aa-0.1□□□□□ -2.43
NIP100YPL174C APC1P53886 1748 aa-0.1□□□□□ -2.43
NIP100YPL174C SRL3P36167 246 aa-0.11□□□□□ -2.43
NIP100YPL174C XPT1P47165 209 aa-0.11□□□□□ -2.43
NIP100YPL174C TTI2P47168 421 aa-0.11□□□□□ -2.43
NIP100YPL174C TY1B-HO13535 1793 aa-0.11□□□□□ -2.43
NIP100YPL174C POL2P21951 2222 aaKnown RBP-0.11□□□□□ -2.43
NIP100YPL174C YLR157W-EP0CF00 54 aa-0.11□□□□□ -2.43
NIP100YPL174C SEN1Q00416 2231 aaKnown RBP-0.11□□□□□ -2.43
NIP100YPL174C TMA20P89886 181 aaPredicted RBP-0.12□□□□□ -2.43
NIP100YPL174C YLR046CQ12253 270 aa-0.12□□□□□ -2.43
NIP100YPL174C BLM10P43583 2143 aa-0.12□□□□□ -2.43
NIP100YPL174C CSH1P38287 376 aa-0.12□□□□□ -2.43
NIP100YPL174C CCC1P47818 322 aa-0.12□□□□□ -2.43
NIP100YPL174C COA6Q3E846 104 aa-0.12□□□□□ -2.43
NIP100YPL174C CSF1Q12150 2958 aa-0.12□□□□□ -2.43
NIP100YPL174C YNR064CP53750 290 aa-0.13□□□□□ -2.43
NIP100YPL174C FMN1Q03778 218 aa-0.13□□□□□ -2.43
NIP100YPL174C HFA1P32874 2273 aa-0.13□□□□□ -2.43
NIP100YPL174C CMD1P06787 147 aaKnown RBP-0.14□□□□□ -2.43
NIP100YPL174C SRP14P38985 146 aa-0.14□□□□□ -2.43
NIP100YPL174C TY1B-BRQ12193 1756 aa-0.14□□□□□ -2.43
NIP100YPL174C TY1B-DR3Q99231 1755 aa-0.14□□□□□ -2.43
NIP100YPL174C FKS3Q04952 1785 aa-0.14□□□□□ -2.43
NIP100YPL174C TRR1P29509 319 aaKnown RBP-0.14□□□□□ -2.43
NIP100YPL174C TIM11P81449 96 aaPredicted RBP-0.14□□□□□ -2.43
NIP100YPL174C YDL241WQ07738 123 aa-0.14□□□□□ -2.43
NIP100YPL174C IPT1P38954 527 aa-0.15□□□□□ -2.43
NIP100YPL174C YGL193CP53097 103 aa-0.15□□□□□ -2.43
NIP100YPL174C NMA1Q06178 401 aaKnown RBP-0.15□□□□□ -2.43
NIP100YPL174C YPR153WQ06537 140 aa-0.15□□□□□ -2.43
NIP100YPL174C ATG10Q07879 167 aa-0.15□□□□□ -2.43
NIP100YPL174C YOR034C-AQ3E735 80 aa-0.15□□□□□ -2.43
NIP100YPL174C PEX34P25584 144 aa-0.15□□□□□ -2.43
NIP100YPL174C CMC4Q3E7A9 73 aa-0.15□□□□□ -2.43
NIP100YPL174C RPL33AP05744 107 aaKnown RBP-0.16□□□□□ -2.43
NIP100YPL174C SEC72P39742 193 aaKnown RBP-0.16□□□□□ -2.43
NIP100YPL174C YDR476CQ03362 224 aa-0.16□□□□□ -2.43
NIP100YPL174C THI74Q04083 370 aa-0.16□□□□□ -2.43
NIP100YPL174C SEN15Q04675 128 aa-0.16□□□□□ -2.43
NIP100YPL174C YMR105W-AQ8TGS8 64 aa-0.16□□□□□ -2.43
NIP100YPL174C YNL140CP53910 189 aa-0.16□□□□□ -2.44
NIP100YPL174C YPR114WQ06107 315 aa-0.16□□□□□ -2.44
NIP100YPL174C VPS13Q07878 3144 aa-0.16□□□□□ -2.44
NIP100YPL174C BRR2P32639 2163 aaKnown RBP-0.17□□□□□ -2.44
NIP100YPL174C YKR041WP36134 250 aa-0.17□□□□□ -2.44
NIP100YPL174C SLM6P38343 150 aa-0.17□□□□□ -2.44
NIP100YPL174C YNL200CP40165 246 aaKnown RBP-0.17□□□□□ -2.44
NIP100YPL174C UTP10P42945 1769 aaKnown RBP-0.17□□□□□ -2.44
NIP100YPL174C APA2P22108 325 aa-0.17□□□□□ -2.44
NIP100YPL174C RCF2P53721 224 aa-0.17□□□□□ -2.44
NIP100YPL174C GIM3P53900 129 aa-0.17□□□□□ -2.44
NIP100YPL174C HUT1Q12520 339 aa-0.17□□□□□ -2.44
NIP100YPL174C INO4P13902 151 aa-0.17□□□□□ -2.44
NIP100YPL174C YPT31P38555 223 aaKnown RBP-0.18□□□□□ -2.44
NIP100YPL174C YHR140WP38842 239 aa-0.18□□□□□ -2.44
NIP100YPL174C ATP7P30902 174 aa-0.18□□□□□ -2.44
NIP100YPL174C ATP19P81451 68 aa-0.18□□□□□ -2.44
NIP100YPL174C MAK3Q03503 176 aa-0.18□□□□□ -2.44
NIP100YPL174C YLR050CQ12155 161 aaKnown RBP-0.18□□□□□ -2.44
NIP100YPL174C EST3Q03096 181 aa-0.19□□□□□ -2.44
NIP100YPL174C GRE1Q08969 168 aa-0.19□□□□□ -2.44
NIP100YPL174C TSC11P40061 1430 aa-0.19□□□□□ -2.44
NIP100YPL174C LAA1P39526 2014 aa-0.19□□□□□ -2.44
NIP100YPL174C ATP5P09457 212 aa-0.19□□□□□ -2.44
NIP100YPL174C NHP6AP11632 93 aaKnown RBP-0.19□□□□□ -2.44
NIP100YPL174C GLC8P41818 229 aa-0.19□□□□□ -2.44
NIP100YPL174C MLP2P40457 1679 aa-0.2□□□□□ -2.44
NIP100YPL174C GPI11Q06636 219 aa-0.2□□□□□ -2.44
NIP100YPL174C FIT3Q08907 204 aa-0.2□□□□□ -2.44
NIP100YPL174C GPI2P46961 280 aa-0.2□□□□□ -2.44
NIP100YPL174C RRT7Q07829 113 aa-0.2□□□□□ -2.44
NIP100YPL174C IRC19Q07843 230 aa-0.2□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms