RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W POR2P40478 281 aa0.08□□□□□ -2.4
VAM3YOR106W YGL149WP53116 101 aa0.08□□□□□ -2.4
VAM3YOR106W NAT5Q08689 176 aa0.08□□□□□ -2.4
VAM3YOR106W RME1P32338 300 aaKnown RBP0.07□□□□□ -2.4
VAM3YOR106W SFT2P38166 215 aa0.07□□□□□ -2.4
VAM3YOR106W FIG1P38224 298 aa0.06□□□□□ -2.4
VAM3YOR106W SAC3P46674 1301 aa0.06□□□□□ -2.4
VAM3YOR106W YRF1-3P0CX14 1859 aa0.05□□□□□ -2.4
VAM3YOR106W YRF1-7P0CX15 1859 aa0.05□□□□□ -2.4
VAM3YOR106W RPS28BP0C0X0 67 aaKnown RBP0.05□□□□□ -2.4
VAM3YOR106W RPS29BP41058 56 aaKnown RBP0.05□□□□□ -2.4
VAM3YOR106W RPS28AQ3E7X9 67 aaPredicted RBP0.05□□□□□ -2.4
VAM3YOR106W MED11Q99278 115 aa0.05□□□□□ -2.4
VAM3YOR106W TY1B-HO13535 1793 aa0.04□□□□□ -2.4
VAM3YOR106W FAS2P19097 1887 aaKnown RBP0.04□□□□□ -2.4
VAM3YOR106W YSF3P0C074 85 aaPredicted RBP0.04□□□□□ -2.4
VAM3YOR106W LSM1P47017 172 aaKnown RBP0.04□□□□□ -2.4
VAM3YOR106W YOR385WQ08909 290 aa0.04□□□□□ -2.4
VAM3YOR106W GTT2Q12390 233 aa0.04□□□□□ -2.4
VAM3YOR106W SNT2P53127 1403 aa0.04□□□□□ -2.4
VAM3YOR106W MYO1P08964 1928 aa0.03□□□□□ -2.4
VAM3YOR106W RPS1AP33442 255 aaKnown RBP0.03□□□□□ -2.4
VAM3YOR106W LSM8P47093 109 aaKnown RBP0.03□□□□□ -2.4
VAM3YOR106W YLR296WQ05898 108 aa0.03□□□□□ -2.4
VAM3YOR106W RAF1Q06891 181 aa0.03□□□□□ -2.4
VAM3YOR106W DDP1Q99321 188 aaKnown RBP0.03□□□□□ -2.4
VAM3YOR106W TAO3P40468 2376 aa0.02□□□□□ -2.41
VAM3YOR106W PFY1P07274 126 aa0.02□□□□□ -2.41
VAM3YOR106W MRPL31P14063 131 aaPredicted RBP0.02□□□□□ -2.41
VAM3YOR106W SRX1P36077 127 aa0.02□□□□□ -2.41
VAM3YOR106W LDB18Q07887 179 aa0.02□□□□□ -2.41
VAM3YOR106W MRPL11P36521 249 aaPredicted RBP0.01□□□□□ -2.41
VAM3YOR106W YLR194CQ05777 254 aa0.01□□□□□ -2.41
VAM3YOR106W MRPL44P19956 98 aa0□□□□□ -2.41
VAM3YOR106W YFR035CP43608 114 aa0□□□□□ -2.41
VAM3YOR106W YJR128WP47162 119 aa0□□□□□ -2.41
VAM3YOR106W BRP1P53194 125 aa0□□□□□ -2.41
VAM3YOR106W RTC6O14464 93 aa-0.01□□□□□ -2.41
VAM3YOR106W SUA7P29055 345 aaPredicted RBP-0.01□□□□□ -2.41
VAM3YOR106W AUA1P32450 94 aa-0.01□□□□□ -2.41
VAM3YOR106W SUI1P32911 108 aaKnown RBP-0.01□□□□□ -2.41
VAM3YOR106W ARL3Q02804 198 aa-0.01□□□□□ -2.41
VAM3YOR106W COF1Q03048 143 aaKnown RBP-0.01□□□□□ -2.41
VAM3YOR106W PKR1Q03880 122 aaKnown RBP-0.01□□□□□ -2.41
VAM3YOR106W YMR320WQ04897 101 aa-0.01□□□□□ -2.41
VAM3YOR106W FCF2Q12035 217 aaPredicted RBP-0.01□□□□□ -2.41
VAM3YOR106W HAP3P13434 144 aa-0.02□□□□□ -2.41
VAM3YOR106W AIM18P38884 321 aa-0.02□□□□□ -2.41
VAM3YOR106W RAV2Q03956 351 aa-0.02□□□□□ -2.41
VAM3YOR106W ATP14Q12349 124 aa-0.02□□□□□ -2.41
VAM3YOR106W PET20Q99373 253 aa-0.02□□□□□ -2.41
VAM3YOR106W EMP24P32803 203 aaKnown RBP-0.03□□□□□ -2.41
VAM3YOR106W QCR10P37299 77 aa-0.03□□□□□ -2.41
VAM3YOR106W MOG1P47123 218 aa-0.03□□□□□ -2.41
VAM3YOR106W SPG1P50088 95 aa-0.03□□□□□ -2.41
VAM3YOR106W BRR2P32639 2163 aaKnown RBP-0.04□□□□□ -2.42
VAM3YOR106W HSP10P38910 106 aa-0.04□□□□□ -2.42
VAM3YOR106W ENV10Q99382 181 aa-0.04□□□□□ -2.42
VAM3YOR106W YAL064WP39711 94 aa-0.05□□□□□ -2.42
VAM3YOR106W YIL163CP40448 117 aa-0.05□□□□□ -2.42
VAM3YOR106W YDR366CP87287 132 aa-0.05□□□□□ -2.42
VAM3YOR106W SEC16P48415 2195 aaKnown RBP-0.05□□□□□ -2.42
VAM3YOR106W GSP1P32835 219 aaKnown RBP-0.06□□□□□ -2.42
VAM3YOR106W PRS3P38689 320 aaKnown RBP-0.06□□□□□ -2.42
VAM3YOR106W HHO1P53551 258 aa-0.06□□□□□ -2.42
VAM3YOR106W PAU21P0CE86 164 aa-0.07□□□□□ -2.42
VAM3YOR106W PAU22P0CE87 164 aa-0.07□□□□□ -2.42
VAM3YOR106W YCR050CP25630 102 aa-0.07□□□□□ -2.42
VAM3YOR106W YEA6P39953 335 aa-0.07□□□□□ -2.42
VAM3YOR106W EFM5P53200 248 aaKnown RBP-0.07□□□□□ -2.42
VAM3YOR106W SDH7Q04401 133 aa-0.07□□□□□ -2.42
VAM3YOR106W YOL164W-AQ3E7A5 60 aa-0.07□□□□□ -2.42
VAM3YOR106W LCL1Q02786 101 aa-0.08□□□□□ -2.42
VAM3YOR106W PET54P10834 293 aa-0.09□□□□□ -2.42
VAM3YOR106W RPL14AP36105 138 aaKnown RBP-0.09□□□□□ -2.42
VAM3YOR106W RPL14BP38754 138 aaKnown RBP-0.09□□□□□ -2.42
VAM3YOR106W HPM1P40481 377 aa-0.09□□□□□ -2.42
VAM3YOR106W RPL36BO14455 100 aaKnown RBP-0.1□□□□□ -2.43
VAM3YOR106W RPL36AP05745 100 aaPredicted RBP-0.1□□□□□ -2.43
VAM3YOR106W RPC19P28000 142 aaKnown RBP-0.1□□□□□ -2.43
VAM3YOR106W RBL2P48606 106 aaKnown RBP-0.1□□□□□ -2.43
VAM3YOR106W YGR039WP53225 103 aa-0.1□□□□□ -2.43
VAM3YOR106W YOR1P53049 1477 aa-0.1□□□□□ -2.43
VAM3YOR106W YGR017WP53210 297 aa-0.11□□□□□ -2.43
VAM3YOR106W ELC1Q03071 99 aa-0.11□□□□□ -2.43
VAM3YOR106W HPA2Q06592 156 aa-0.11□□□□□ -2.43
VAM3YOR106W SPC3Q12133 184 aa-0.11□□□□□ -2.43
VAM3YOR106W YDR010CQ12426 110 aa-0.11□□□□□ -2.43
VAM3YOR106W YGR240C-AQ3E786 66 aa-0.12□□□□□ -2.43
VAM3YOR106W TVP18Q04767 167 aa-0.13□□□□□ -2.43
VAM3YOR106W TRS20P38334 175 aa-0.14□□□□□ -2.43
VAM3YOR106W SMD2Q06217 110 aaKnown RBP-0.14□□□□□ -2.43
VAM3YOR106W OCA6Q12454 224 aa-0.14□□□□□ -2.43
VAM3YOR106W RPL22AP05749 121 aaKnown RBP-0.15□□□□□ -2.43
VAM3YOR106W YHR173CP38864 112 aa-0.15□□□□□ -2.43
VAM3YOR106W URB1P34241 1764 aaKnown RBP-0.15□□□□□ -2.43
VAM3YOR106W YBR056W-AI2HB52 66 aa-0.16□□□□□ -2.44
VAM3YOR106W SEC7P11075 2009 aaKnown RBP-0.16□□□□□ -2.44
VAM3YOR106W PHS1P40857 217 aa-0.17□□□□□ -2.44
VAM3YOR106W ICS3P47034 131 aa-0.17□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 88.1 ms