RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C RPL33AP05744 107 aaKnown RBP1.5□□□□□ -2.17
WHI3YNL197C FUN14P18411 198 aa1.5□□□□□ -2.17
WHI3YNL197C SFT1P43682 97 aa1.5□□□□□ -2.17
WHI3YNL197C YGL149WP53116 101 aa1.5□□□□□ -2.17
WHI3YNL197C YDR278CQ05612 105 aa1.5□□□□□ -2.17
WHI3YNL197C HFA1P32874 2273 aa1.5□□□□□ -2.17
WHI3YNL197C QCR10P37299 77 aa1.5□□□□□ -2.17
WHI3YNL197C SED1Q01589 338 aa1.5□□□□□ -2.17
WHI3YNL197C YPL067CQ02754 198 aa1.5□□□□□ -2.17
WHI3YNL197C RPL40AP0CH08 128 aaKnown RBP1.49□□□□□ -2.17
WHI3YNL197C RPL40BP0CH09 128 aaKnown RBP1.49□□□□□ -2.17
WHI3YNL197C PHS1P40857 217 aa1.49□□□□□ -2.17
WHI3YNL197C YMR007WQ03675 126 aa1.49□□□□□ -2.17
WHI3YNL197C NAT5Q08689 176 aa1.49□□□□□ -2.17
WHI3YNL197C SFT2P38166 215 aa1.48□□□□□ -2.17
WHI3YNL197C SDH7Q04401 133 aa1.48□□□□□ -2.17
WHI3YNL197C HSL1P34244 1518 aa1.48□□□□□ -2.17
WHI3YNL197C YOL013W-AP0C272 63 aaPredicted RBP1.47□□□□□ -2.17
WHI3YNL197C NMT1P14743 455 aa1.47□□□□□ -2.17
WHI3YNL197C MRP49P32388 137 aa1.47□□□□□ -2.17
WHI3YNL197C YAR064WP39563 99 aa1.47□□□□□ -2.17
WHI3YNL197C UTP11P34247 250 aaPredicted RBP1.47□□□□□ -2.17
WHI3YNL197C BRP1P53194 125 aa1.47□□□□□ -2.17
WHI3YNL197C NKP2Q06162 153 aa1.47□□□□□ -2.17
WHI3YNL197C RTC6O14464 93 aa1.46□□□□□ -2.18
WHI3YNL197C MRPL44P19956 98 aa1.46□□□□□ -2.18
WHI3YNL197C YOR376W-AQ3E805 51 aa1.46□□□□□ -2.18
WHI3YNL197C GSC2P40989 1895 aa1.45□□□□□ -2.18
WHI3YNL197C PRM3Q08931 133 aa1.45□□□□□ -2.18
WHI3YNL197C Q0144Q9ZZW2 109 aa1.45□□□□□ -2.18
WHI3YNL197C RPL37AP49166 88 aaKnown RBP1.45□□□□□ -2.18
WHI3YNL197C YHR213WP0CI67 198 aa1.44□□□□□ -2.18
WHI3YNL197C AIM4P38305 123 aaPredicted RBP1.44□□□□□ -2.18
WHI3YNL197C GAT4P40569 121 aa1.44□□□□□ -2.18
WHI3YNL197C SAE3P89114 91 aa1.44□□□□□ -2.18
WHI3YNL197C YMR122CQ03879 124 aa1.44□□□□□ -2.18
WHI3YNL197C PAU21P0CE86 164 aa1.43□□□□□ -2.18
WHI3YNL197C PAU22P0CE87 164 aa1.43□□□□□ -2.18
WHI3YNL197C YCR001WP25347 104 aa1.43□□□□□ -2.18
WHI3YNL197C UGX2P32772 223 aa1.43□□□□□ -2.18
WHI3YNL197C YLR099W-AQ3E798 87 aa1.43□□□□□ -2.18
WHI3YNL197C HSP10P38910 106 aa1.43□□□□□ -2.18
WHI3YNL197C LST8P41318 303 aa1.43□□□□□ -2.18
WHI3YNL197C GTT2Q12390 233 aa1.43□□□□□ -2.18
WHI3YNL197C WIP1Q2V2P8 89 aa1.42□□□□□ -2.18
WHI3YNL197C YIL102CP40488 101 aa1.41□□□□□ -2.18
WHI3YNL197C MRPL11P36521 249 aaPredicted RBP1.41□□□□□ -2.18
WHI3YNL197C AIM18P38884 321 aa1.41□□□□□ -2.18
WHI3YNL197C YNL122CP53921 115 aaPredicted RBP1.41□□□□□ -2.18
WHI3YNL197C YKL044WP36092 106 aa1.4□□□□□ -2.19
WHI3YNL197C ERV14P53173 138 aa1.4□□□□□ -2.19
WHI3YNL197C COA4Q05809 96 aa1.4□□□□□ -2.19
WHI3YNL197C YLR296WQ05898 108 aa1.4□□□□□ -2.19
WHI3YNL197C SLO1Q3E784 85 aa1.4□□□□□ -2.19
WHI3YNL197C NUM1Q00402 2748 aa1.4□□□□□ -2.19
WHI3YNL197C ROM2P51862 1356 aaKnown RBP1.39□□□□□ -2.19
WHI3YNL197C HAP3P13434 144 aa1.39□□□□□ -2.19
WHI3YNL197C ANB1P19211 157 aa1.39□□□□□ -2.19
WHI3YNL197C YLR118CQ12354 227 aa1.39□□□□□ -2.19
WHI3YNL197C SRL3P36167 246 aa1.39□□□□□ -2.19
WHI3YNL197C VMA7P39111 118 aa1.39□□□□□ -2.19
WHI3YNL197C KTI11Q3E840 82 aa1.38□□□□□ -2.19
WHI3YNL197C SNT2P53127 1403 aa1.38□□□□□ -2.19
WHI3YNL197C HAP2P06774 265 aa1.38□□□□□ -2.19
WHI3YNL197C ADK1P07170 222 aaKnown RBP1.38□□□□□ -2.19
WHI3YNL197C SEC59P20048 519 aa1.38□□□□□ -2.19
WHI3YNL197C HHY1P39982 102 aa1.38□□□□□ -2.19
WHI3YNL197C SNF11P38956 169 aa1.37□□□□□ -2.19
WHI3YNL197C FRQ1Q06389 190 aa1.37□□□□□ -2.19
WHI3YNL197C RPS22AP0C0W1 130 aaKnown RBP1.36□□□□□ -2.19
WHI3YNL197C GPI19Q04082 140 aa1.36□□□□□ -2.19
WHI3YNL197C IRC21Q04772 201 aa1.36□□□□□ -2.19
WHI3YNL197C RPS22BQ3E7Y3 130 aaKnown RBP1.36□□□□□ -2.19
WHI3YNL197C MYO2P19524 1574 aaKnown RBP1.35□□□□□ -2.19
WHI3YNL197C YSF3P0C074 85 aaPredicted RBP1.35□□□□□ -2.19
WHI3YNL197C MGR2Q02889 113 aa1.35□□□□□ -2.19
WHI3YNL197C SPC24Q04477 213 aa1.35□□□□□ -2.19
WHI3YNL197C LDB18Q07887 179 aa1.35□□□□□ -2.19
WHI3YNL197C MPC1P53157 130 aaKnown RBP1.34□□□□□ -2.19
WHI3YNL197C AIM11P87275 137 aa1.34□□□□□ -2.19
WHI3YNL197C RPB11P38902 120 aa1.34□□□□□ -2.2
WHI3YNL197C YIL014C-AQ02598 104 aa1.34□□□□□ -2.2
WHI3YNL197C AIM36Q03798 255 aa1.34□□□□□ -2.2
WHI3YNL197C YLR194CQ05777 254 aa1.34□□□□□ -2.2
WHI3YNL197C YOR072WQ08486 104 aa1.34□□□□□ -2.2
WHI3YNL197C FCF2Q12035 217 aaPredicted RBP1.34□□□□□ -2.2
WHI3YNL197C RPL36BO14455 100 aaKnown RBP1.33□□□□□ -2.2
WHI3YNL197C RPL36AP05745 100 aaPredicted RBP1.33□□□□□ -2.2
WHI3YNL197C PFY1P07274 126 aa1.33□□□□□ -2.2
WHI3YNL197C GSP1P32835 219 aaKnown RBP1.33□□□□□ -2.2
WHI3YNL197C YBR013CP38215 129 aa1.33□□□□□ -2.2
WHI3YNL197C MIC27P50945 234 aa1.32□□□□□ -2.2
WHI3YNL197C PAU12P53343 120 aa1.32□□□□□ -2.2
WHI3YNL197C TRM732Q03496 1420 aa1.32□□□□□ -2.2
WHI3YNL197C RPO41P13433 1351 aaKnown RBP1.32□□□□□ -2.2
WHI3YNL197C YHR130CP38834 111 aa1.32□□□□□ -2.2
WHI3YNL197C YAR029WP39549 74 aa1.32□□□□□ -2.2
WHI3YNL197C HPA2Q06592 156 aa1.32□□□□□ -2.2
WHI3YNL197C YLR042CQ07990 161 aa1.32□□□□□ -2.2
WHI3YNL197C YJL009WP47078 108 aa1.31□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 90.6 ms