RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W YPR170W-BP0C5R9 85 aa5.33□□□□□ -1.56
HDA1YNL021W DAD3P69850 94 aa5.33□□□□□ -1.56
HDA1YNL021W YDR366CP87287 132 aa5.33□□□□□ -1.56
HDA1YNL021W YOR020W-AQ3E824 90 aa5.33□□□□□ -1.56
HDA1YNL021W YGR039WP53225 103 aa5.33□□□□□ -1.56
HDA1YNL021W ADH1P00330 348 aaKnown RBP5.32□□□□□ -1.56
HDA1YNL021W COX5BP00425 151 aa5.32□□□□□ -1.56
HDA1YNL021W MRP17P28778 131 aa5.32□□□□□ -1.56
HDA1YNL021W YPT53P36019 220 aa5.32□□□□□ -1.56
HDA1YNL021W SWM2P40342 146 aa5.32□□□□□ -1.56
HDA1YNL021W CAB4P53332 305 aa5.32□□□□□ -1.56
HDA1YNL021W THI74Q04083 370 aa5.32□□□□□ -1.56
HDA1YNL021W YDL180WQ12301 547 aa5.32□□□□□ -1.56
HDA1YNL021W Q0255P03881 472 aa5.32□□□□□ -1.56
HDA1YNL021W YER039C-AP0CD97 72 aa5.32□□□□□ -1.56
HDA1YNL021W RPB3P16370 318 aaKnown RBP5.32□□□□□ -1.56
HDA1YNL021W YGL088WP53151 121 aa5.32□□□□□ -1.56
HDA1YNL021W YPL264CQ08980 353 aa5.32□□□□□ -1.56
HDA1YNL021W RPL40AP0CH08 128 aaKnown RBP5.31□□□□□ -1.56
HDA1YNL021W RPL40BP0CH09 128 aaKnown RBP5.31□□□□□ -1.56
HDA1YNL021W APJ1P53940 528 aa5.31□□□□□ -1.56
HDA1YNL021W AIM11P87275 137 aa5.31□□□□□ -1.56
HDA1YNL021W SCP1Q08873 200 aa5.31□□□□□ -1.56
HDA1YNL021W YMR230W-AQ3E7B5 62 aa5.31□□□□□ -1.56
HDA1YNL021W FMP49A0A023PZB3 126 aa5.3□□□□□ -1.56
HDA1YNL021W REP2P03872 296 aa5.3□□□□□ -1.56
HDA1YNL021W RPL30P14120 105 aaKnown RBP5.3□□□□□ -1.56
HDA1YNL021W TOR2P32600 2474 aaKnown RBP5.3□□□□□ -1.56
HDA1YNL021W VPS71Q03433 280 aa5.3□□□□□ -1.56
HDA1YNL021W FCY1Q12178 158 aa5.3□□□□□ -1.56
HDA1YNL021W TSC3Q3E790 80 aa5.3□□□□□ -1.56
HDA1YNL021W SEN1Q00416 2231 aaKnown RBP5.3□□□□□ -1.56
HDA1YNL021W YLR156WP0CE96 114 aa5.3□□□□□ -1.56
HDA1YNL021W YLR159WP0CE97 114 aa5.3□□□□□ -1.56
HDA1YNL021W YLR161WP0CE98 114 aa5.3□□□□□ -1.56
HDA1YNL021W FMT1P32785 401 aa5.3□□□□□ -1.56
HDA1YNL021W CAX4P53223 239 aa5.3□□□□□ -1.56
HDA1YNL021W GNA1P43577 159 aaPredicted RBP5.29□□□□□ -1.56
HDA1YNL021W TTI2P47168 421 aa5.29□□□□□ -1.56
HDA1YNL021W SYM1Q06563 197 aa5.29□□□□□ -1.56
HDA1YNL021W ATP15P21306 62 aa5.29□□□□□ -1.56
HDA1YNL021W PRE1P22141 198 aaKnown RBP5.29□□□□□ -1.56
HDA1YNL021W DGK1Q12382 290 aa5.29□□□□□ -1.56
HDA1YNL021W CDC39P25655 2108 aaKnown RBP5.28□□□□□ -1.56
HDA1YNL021W TDA4P47153 279 aa5.28□□□□□ -1.56
HDA1YNL021W VPS28Q02767 242 aa5.28□□□□□ -1.56
HDA1YNL021W SEC16P48415 2195 aaKnown RBP5.28□□□□□ -1.56
HDA1YNL021W FEX1Q08913 375 aa5.27□□□□□ -1.57
HDA1YNL021W YNL277W-AQ3E7Z0 62 aa5.27□□□□□ -1.57
HDA1YNL021W GPI18P38211 433 aa5.27□□□□□ -1.57
HDA1YNL021W SFT1P43682 97 aa5.27□□□□□ -1.57
HDA1YNL021W YGL194C-AQ2V2P6 80 aa5.27□□□□□ -1.57
HDA1YNL021W BOL1Q3E793 110 aa5.27□□□□□ -1.57
HDA1YNL021W RCE1Q03530 315 aa5.26□□□□□ -1.57
HDA1YNL021W FCF1Q05498 189 aaPredicted RBP5.26□□□□□ -1.57
HDA1YNL021W NAT3Q06504 195 aa5.26□□□□□ -1.57
HDA1YNL021W ISD11Q6Q560 94 aa5.26□□□□□ -1.57
HDA1YNL021W YKR070WP36151 352 aaKnown RBP5.26□□□□□ -1.57
HDA1YNL021W CTR2P38865 189 aa5.26□□□□□ -1.57
HDA1YNL021W ALG9P53868 555 aaKnown RBP5.26□□□□□ -1.57
HDA1YNL021W FEX2Q08991 375 aa5.26□□□□□ -1.57
HDA1YNL021W PEX4P29340 183 aa5.25□□□□□ -1.57
HDA1YNL021W YEA6P39953 335 aa5.25□□□□□ -1.57
HDA1YNL021W YNL200CP40165 246 aaKnown RBP5.25□□□□□ -1.57
HDA1YNL021W ATO3Q12359 275 aa5.25□□□□□ -1.57
HDA1YNL021W TIR1P10863 254 aa5.24□□□□□ -1.57
HDA1YNL021W BET1P22804 142 aa5.24□□□□□ -1.57
HDA1YNL021W ECM31P38122 312 aa5.24□□□□□ -1.57
HDA1YNL021W PRE5P40302 234 aaKnown RBP5.24□□□□□ -1.57
HDA1YNL021W ANT1Q06497 328 aa5.24□□□□□ -1.57
HDA1YNL021W RAF1Q06891 181 aa5.24□□□□□ -1.57
HDA1YNL021W ANB1P19211 157 aa5.24□□□□□ -1.57
HDA1YNL021W AGA2P32781 87 aa5.24□□□□□ -1.57
HDA1YNL021W SHB17P36136 271 aaKnown RBP5.24□□□□□ -1.57
HDA1YNL021W HUT1Q12520 339 aa5.24□□□□□ -1.57
HDA1YNL021W YPR014CQ6B0W2 109 aa5.24□□□□□ -1.57
HDA1YNL021W CSF1Q12150 2958 aa5.23□□□□□ -1.57
HDA1YNL021W YFL019CP43576 117 aa5.23□□□□□ -1.57
HDA1YNL021W FIP1P45976 327 aa5.23□□□□□ -1.57
HDA1YNL021W YLR042CQ07990 161 aa5.23□□□□□ -1.57
HDA1YNL021W YCR075W-AQ3E830 75 aa5.23□□□□□ -1.57
HDA1YNL021W CCS1P40202 249 aaKnown RBP5.23□□□□□ -1.57
HDA1YNL021W RPL13BP40212 199 aaKnown RBP5.23□□□□□ -1.57
HDA1YNL021W YIR035CP40579 254 aa5.23□□□□□ -1.57
HDA1YNL021W YGL230CP53074 147 aa5.23□□□□□ -1.57
HDA1YNL021W SMD1Q02260 146 aaPredicted RBP5.23□□□□□ -1.57
HDA1YNL021W TVP18Q04767 167 aa5.23□□□□□ -1.57
HDA1YNL021W RPL13AQ12690 199 aaPredicted RBP5.23□□□□□ -1.57
HDA1YNL021W YLR365WQ7LIF2 110 aa5.23□□□□□ -1.57
HDA1YNL021W RPL9AP05738 191 aaKnown RBP5.22□□□□□ -1.57
HDA1YNL021W YER084WP40057 128 aa5.22□□□□□ -1.57
HDA1YNL021W SMD3P43321 101 aaKnown RBP5.22□□□□□ -1.57
HDA1YNL021W RPL9BP51401 191 aaKnown RBP5.22□□□□□ -1.57
HDA1YNL021W YOL014WQ08110 124 aa5.22□□□□□ -1.57
HDA1YNL021W SRP21P32342 167 aa5.21□□□□□ -1.57
HDA1YNL021W YHR140WP38842 239 aa5.21□□□□□ -1.57
HDA1YNL021W YAR068WP39564 161 aa5.21□□□□□ -1.57
HDA1YNL021W FLX1P40464 311 aa5.21□□□□□ -1.57
HDA1YNL021W PIN3Q06449 215 aa5.21□□□□□ -1.57
HDA1YNL021W FIT3Q08907 204 aa5.21□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms