RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W RPL14AP36105 138 aaKnown RBP2.97□□□□□ -1.93
PUB1YNL016W ECM34P38728 170 aa2.97□□□□□ -1.93
PUB1YNL016W RPL14BP38754 138 aaKnown RBP2.97□□□□□ -1.93
PUB1YNL016W YHR125WP38831 101 aa2.97□□□□□ -1.93
PUB1YNL016W YHR140WP38842 239 aa2.97□□□□□ -1.93
PUB1YNL016W YJL218WP40892 196 aaKnown RBP2.97□□□□□ -1.93
PUB1YNL016W SAE3P89114 91 aa2.97□□□□□ -1.93
PUB1YNL016W VPS28Q02767 242 aa2.97□□□□□ -1.93
PUB1YNL016W NCE101Q02820 53 aa2.97□□□□□ -1.93
PUB1YNL016W MCH1Q07376 486 aa2.97□□□□□ -1.93
PUB1YNL016W YNL277W-AQ3E7Z0 62 aa2.97□□□□□ -1.93
PUB1YNL016W MDH2P22133 377 aa2.96□□□□□ -1.94
PUB1YNL016W BUD23P25627 275 aaPredicted RBP2.96□□□□□ -1.94
PUB1YNL016W MRPL17P36528 281 aa2.96□□□□□ -1.94
PUB1YNL016W YBR220CP38318 560 aa2.96□□□□□ -1.94
PUB1YNL016W RPS12P48589 143 aaKnown RBP2.96□□□□□ -1.94
PUB1YNL016W AIM11P87275 137 aa2.96□□□□□ -1.94
PUB1YNL016W YDR391CQ04170 232 aa2.96□□□□□ -1.94
PUB1YNL016W BOL1Q3E793 110 aa2.96□□□□□ -1.94
PUB1YNL016W YPR096CO13587 100 aa2.95□□□□□ -1.94
PUB1YNL016W SNC2P33328 115 aa2.95□□□□□ -1.94
PUB1YNL016W SFT1P43682 97 aa2.95□□□□□ -1.94
PUB1YNL016W SMD1Q02260 146 aaPredicted RBP2.95□□□□□ -1.94
PUB1YNL016W TMA23Q03525 211 aa2.95□□□□□ -1.94
PUB1YNL016W AIM36Q03798 255 aa2.95□□□□□ -1.94
PUB1YNL016W YTH1Q06102 208 aaPredicted RBP2.95□□□□□ -1.94
PUB1YNL016W ZEO1Q08245 113 aa2.95□□□□□ -1.94
PUB1YNL016W FCF2Q12035 217 aaPredicted RBP2.95□□□□□ -1.94
PUB1YNL016W DDI2P0CH63 225 aa2.94□□□□□ -1.94
PUB1YNL016W DDI3P0CH64 225 aa2.94□□□□□ -1.94
PUB1YNL016W AHT1P29589 182 aa2.94□□□□□ -1.94
PUB1YNL016W YOR062CP36025 268 aa2.94□□□□□ -1.94
PUB1YNL016W HTD2P38790 280 aaKnown RBP2.94□□□□□ -1.94
PUB1YNL016W CTR2P38865 189 aa2.94□□□□□ -1.94
PUB1YNL016W KRE9P39005 276 aa2.94□□□□□ -1.94
PUB1YNL016W DSK2P48510 373 aa2.94□□□□□ -1.94
PUB1YNL016W YGL193CP53097 103 aa2.94□□□□□ -1.94
PUB1YNL016W BUD25P85052 153 aa2.94□□□□□ -1.94
PUB1YNL016W GAL83Q04739 417 aa2.94□□□□□ -1.94
PUB1YNL016W YMR253CQ04835 414 aa2.94□□□□□ -1.94
PUB1YNL016W SCW10Q04951 389 aa2.94□□□□□ -1.94
PUB1YNL016W HSP12P22943 109 aaKnown RBP2.93□□□□□ -1.94
PUB1YNL016W YER188WP40103 239 aa2.93□□□□□ -1.94
PUB1YNL016W GVP36P40531 326 aaKnown RBP2.93□□□□□ -1.94
PUB1YNL016W SMD3P43321 101 aaKnown RBP2.93□□□□□ -1.94
PUB1YNL016W YNR062CP53748 327 aa2.93□□□□□ -1.94
PUB1YNL016W IGO1P53897 168 aa2.93□□□□□ -1.94
PUB1YNL016W YDR102CQ03864 110 aa2.93□□□□□ -1.94
PUB1YNL016W YCL001W-BQ96VH2 84 aa2.93□□□□□ -1.94
PUB1YNL016W YKR070WP36151 352 aaKnown RBP2.92□□□□□ -1.94
PUB1YNL016W UMP1P38293 148 aa2.92□□□□□ -1.94
PUB1YNL016W NSA2P40078 261 aaKnown RBP2.92□□□□□ -1.94
PUB1YNL016W SMX2P40204 77 aaKnown RBP2.92□□□□□ -1.94
PUB1YNL016W YIR020CP40575 100 aa2.92□□□□□ -1.94
PUB1YNL016W YDR274CP87283 123 aa2.92□□□□□ -1.94
PUB1YNL016W YKR005CQ02203 525 aa2.92□□□□□ -1.94
PUB1YNL016W EST3Q03096 181 aa2.92□□□□□ -1.94
PUB1YNL016W TVP18Q04767 167 aa2.92□□□□□ -1.94
PUB1YNL016W SYM1Q06563 197 aa2.92□□□□□ -1.94
PUB1YNL016W FSF1Q12029 327 aaKnown RBP2.92□□□□□ -1.94
PUB1YNL016W ATP20Q12233 115 aa2.92□□□□□ -1.94
PUB1YNL016W SPS2P08459 502 aa2.91□□□□□ -1.94
PUB1YNL016W DDR48P18899 430 aaKnown RBP2.91□□□□□ -1.94
PUB1YNL016W YFR045WP43617 309 aa2.91□□□□□ -1.94
PUB1YNL016W PAC10P48363 199 aa2.91□□□□□ -1.94
PUB1YNL016W MRPS16Q02608 121 aa2.91□□□□□ -1.94
PUB1YNL016W ELC1Q03071 99 aa2.91□□□□□ -1.94
PUB1YNL016W MRPS8Q03799 155 aa2.91□□□□□ -1.94
PUB1YNL016W FYV12Q08559 129 aa2.91□□□□□ -1.94
PUB1YNL016W RAS2P01120 322 aaKnown RBP2.9□□□□□ -1.94
PUB1YNL016W POR1P04840 283 aaKnown RBP2.9□□□□□ -1.94
PUB1YNL016W YER039C-AP0CD97 72 aa2.9□□□□□ -1.94
PUB1YNL016W ANB1P19211 157 aa2.9□□□□□ -1.94
PUB1YNL016W YPT31P38555 223 aaKnown RBP2.9□□□□□ -1.94
PUB1YNL016W GEP7P53171 287 aa2.9□□□□□ -1.94
PUB1YNL016W YGR026WP53217 278 aa2.9□□□□□ -1.94
PUB1YNL016W SED1Q01589 338 aa2.9□□□□□ -1.94
PUB1YNL016W RNH202Q05635 350 aa2.9□□□□□ -1.94
PUB1YNL016W ANT1Q06497 328 aa2.9□□□□□ -1.94
PUB1YNL016W YLR042CQ07990 161 aa2.9□□□□□ -1.94
PUB1YNL016W YOR268CQ08734 132 aa2.9□□□□□ -1.94
PUB1YNL016W RTR2Q12378 196 aa2.9□□□□□ -1.94
PUB1YNL016W RAD6P06104 172 aa2.89□□□□□ -1.95
PUB1YNL016W YHR180WP38868 163 aa2.89□□□□□ -1.95
PUB1YNL016W RPB11P38902 120 aa2.89□□□□□ -1.95
PUB1YNL016W SPC25P40014 221 aa2.89□□□□□ -1.95
PUB1YNL016W GON7P46984 123 aa2.89□□□□□ -1.95
PUB1YNL016W SIP18P50263 79 aa2.89□□□□□ -1.95
PUB1YNL016W MPC3P53311 146 aa2.89□□□□□ -1.95
PUB1YNL016W RCE1Q03530 315 aa2.89□□□□□ -1.95
PUB1YNL016W PIN3Q06449 215 aa2.89□□□□□ -1.95
PUB1YNL016W HUT1Q12520 339 aa2.89□□□□□ -1.95
PUB1YNL016W YMR230W-AQ3E7B5 62 aa2.89□□□□□ -1.95
PUB1YNL016W VAR1P02381 398 aa2.88□□□□□ -1.95
PUB1YNL016W HIS3P06633 220 aa2.88□□□□□ -1.95
PUB1YNL016W YHR032W-AP0C5N6 59 aa2.88□□□□□ -1.95
PUB1YNL016W YER084WP40057 128 aa2.88□□□□□ -1.95
PUB1YNL016W YPI1P43587 155 aa2.88□□□□□ -1.95
PUB1YNL016W SBH1P52870 82 aa2.88□□□□□ -1.95
PUB1YNL016W MHF1Q3E835 90 aa2.88□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms