RNA–Protein interactions for RNA: YMR260C

TIF11, Transcript of Translation initiation factor eIF1A, yeast

Gene TIF11, Length 462 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF11	YMR260C	CDC39	P25655	2108 aa	Known RBP	0.8	□□□□□ -2.28
TIF11	YMR260C	ANB1	P19211	157 aa		0.79	□□□□□ -2.28
TIF11	YMR260C	YCR050C	P25630	102 aa		0.79	□□□□□ -2.28
TIF11	YMR260C	QCR10	P37299	77 aa		0.79	□□□□□ -2.28
TIF11	YMR260C	SFT2	P38166	215 aa		0.79	□□□□□ -2.28
TIF11	YMR260C	PHS1	P40857	217 aa		0.79	□□□□□ -2.28
TIF11	YMR260C	YNL122C	P53921	115 aa	Predicted RBP	0.79	□□□□□ -2.28
TIF11	YMR260C	TIM8	P57744	87 aa		0.79	□□□□□ -2.28
TIF11	YMR260C	IRC21	Q04772	201 aa		0.79	□□□□□ -2.28
TIF11	YMR260C	NKP2	Q06162	153 aa		0.79	□□□□□ -2.28
TIF11	YMR260C	LCL2	Q08045	131 aa		0.79	□□□□□ -2.28
TIF11	YMR260C	YOR072W	Q08486	104 aa		0.79	□□□□□ -2.28
TIF11	YMR260C	HSL1	P34244	1518 aa		0.79	□□□□□ -2.28
TIF11	YMR260C	HFA1	P32874	2273 aa		0.78	□□□□□ -2.28
TIF11	YMR260C	HAP2	P06774	265 aa		0.78	□□□□□ -2.28
TIF11	YMR260C	PFY1	P07274	126 aa		0.78	□□□□□ -2.28
TIF11	YMR260C	YGL014C-A	P0C5N1	53 aa		0.78	□□□□□ -2.28
TIF11	YMR260C	YHR213W	P0CI67	198 aa		0.78	□□□□□ -2.28
TIF11	YMR260C	HAP3	P13434	144 aa		0.78	□□□□□ -2.28
TIF11	YMR260C	FUN14	P18411	198 aa		0.78	□□□□□ -2.28
TIF11	YMR260C	YCR001W	P25347	104 aa		0.78	□□□□□ -2.28
TIF11	YMR260C	HYM1	P32464	399 aa		0.78	□□□□□ -2.28
TIF11	YMR260C	SFT1	P43682	97 aa		0.78	□□□□□ -2.28
TIF11	YMR260C	YJL009W	P47078	108 aa		0.78	□□□□□ -2.28
TIF11	YMR260C	BRP1	P53194	125 aa		0.78	□□□□□ -2.28
TIF11	YMR260C	YPL067C	Q02754	198 aa		0.78	□□□□□ -2.28
TIF11	YMR260C	SDH7	Q04401	133 aa		0.78	□□□□□ -2.28
TIF11	YMR260C	SEN15	Q04675	128 aa		0.78	□□□□□ -2.28
TIF11	YMR260C	SLO1	Q3E784	85 aa		0.78	□□□□□ -2.28
TIF11	YMR260C	PAU21	P0CE86	164 aa		0.77	□□□□□ -2.29
TIF11	YMR260C	PAU22	P0CE87	164 aa		0.77	□□□□□ -2.29
TIF11	YMR260C	NMT1	P14743	455 aa		0.77	□□□□□ -2.29
TIF11	YMR260C	UGX2	P32772	223 aa		0.77	□□□□□ -2.29
TIF11	YMR260C	MRPL11	P36521	249 aa	Predicted RBP	0.77	□□□□□ -2.29
TIF11	YMR260C	HSP10	P38910	106 aa		0.77	□□□□□ -2.29
TIF11	YMR260C	YAL064W	P39711	94 aa		0.77	□□□□□ -2.29
TIF11	YMR260C	LST8	P41318	303 aa		0.77	□□□□□ -2.29
TIF11	YMR260C	YGL149W	P53116	101 aa		0.77	□□□□□ -2.29
TIF11	YMR260C	TVP18	Q04767	167 aa		0.77	□□□□□ -2.29
TIF11	YMR260C	KTI11	Q3E840	82 aa		0.77	□□□□□ -2.29
TIF11	YMR260C	RAD50	P12753	1312 aa		0.77	□□□□□ -2.29
TIF11	YMR260C	SLH1	P53327	1967 aa	Known RBP	0.76	□□□□□ -2.29
TIF11	YMR260C	RPS22A	P0C0W1	130 aa	Known RBP	0.76	□□□□□ -2.29
TIF11	YMR260C	YOL013W-A	P0C272	63 aa	Predicted RBP	0.76	□□□□□ -2.29
TIF11	YMR260C	YMR122C	Q03879	124 aa		0.76	□□□□□ -2.29
TIF11	YMR260C	YLR296W	Q05898	108 aa		0.76	□□□□□ -2.29
TIF11	YMR260C	RPS22B	Q3E7Y3	130 aa	Known RBP	0.76	□□□□□ -2.29
TIF11	YMR260C	MRP49	P32388	137 aa		0.75	□□□□□ -2.29
TIF11	YMR260C	UTP11	P34247	250 aa	Predicted RBP	0.75	□□□□□ -2.29
TIF11	YMR260C	VMA7	P39111	118 aa		0.75	□□□□□ -2.29
TIF11	YMR260C	GAT4	P40569	121 aa		0.75	□□□□□ -2.29
TIF11	YMR260C	RPL37B	P51402	88 aa	Known RBP	0.75	□□□□□ -2.29
TIF11	YMR260C	AIM11	P87275	137 aa		0.75	□□□□□ -2.29
TIF11	YMR260C	SAE3	P89114	91 aa		0.75	□□□□□ -2.29
TIF11	YMR260C	MGR2	Q02889	113 aa		0.75	□□□□□ -2.29
TIF11	YMR260C	COA4	Q05809	96 aa		0.75	□□□□□ -2.29
TIF11	YMR260C	ROM2	P51862	1356 aa	Known RBP	0.74	□□□□□ -2.29
TIF11	YMR260C	RTC6	O14464	93 aa		0.74	□□□□□ -2.29
TIF11	YMR260C	RPL40A	P0CH08	128 aa	Known RBP	0.74	□□□□□ -2.29
TIF11	YMR260C	RPL40B	P0CH09	128 aa	Known RBP	0.74	□□□□□ -2.29
TIF11	YMR260C	GSP1	P32835	219 aa	Known RBP	0.74	□□□□□ -2.29
TIF11	YMR260C	TRS20	P38334	175 aa		0.74	□□□□□ -2.29
TIF11	YMR260C	ERV14	P53173	138 aa		0.74	□□□□□ -2.29
TIF11	YMR260C	PRM3	Q08931	133 aa		0.74	□□□□□ -2.29
TIF11	YMR260C	GTT2	Q12390	233 aa		0.74	□□□□□ -2.29
TIF11	YMR260C	COA6	Q3E846	104 aa		0.74	□□□□□ -2.29
TIF11	YMR260C	YHR213W-B	Q8TGK1	99 aa		0.74	□□□□□ -2.29
TIF11	YMR260C	MYO2	P19524	1574 aa	Known RBP	0.74	□□□□□ -2.29
TIF11	YMR260C	RPL36B	O14455	100 aa	Known RBP	0.73	□□□□□ -2.29
TIF11	YMR260C	RPL36A	P05745	100 aa	Predicted RBP	0.73	□□□□□ -2.29
TIF11	YMR260C	SEC59	P20048	519 aa		0.73	□□□□□ -2.29
TIF11	YMR260C	AIM18	P38884	321 aa		0.73	□□□□□ -2.29
TIF11	YMR260C	AIM36	Q03798	255 aa		0.73	□□□□□ -2.29
TIF11	YMR260C	LDB18	Q07887	179 aa		0.73	□□□□□ -2.29
TIF11	YMR260C	YLR118C	Q12354	227 aa		0.73	□□□□□ -2.29
TIF11	YMR260C	MED11	Q99278	115 aa		0.73	□□□□□ -2.29
TIF11	YMR260C	YKL044W	P36092	106 aa		0.72	□□□□□ -2.29
TIF11	YMR260C	APS2	Q00381	147 aa		0.72	□□□□□ -2.29
TIF11	YMR260C	FRQ1	Q06389	190 aa		0.72	□□□□□ -2.29
TIF11	YMR260C	YLR099W-A	Q3E798	87 aa		0.72	□□□□□ -2.29
TIF11	YMR260C	SNT2	P53127	1403 aa		0.72	□□□□□ -2.29
TIF11	YMR260C	YER188C-A	P0C0V2	99 aa		0.71	□□□□□ -2.3
TIF11	YMR260C	HHY1	P39982	102 aa		0.71	□□□□□ -2.3
TIF11	YMR260C	TRM732	Q03496	1420 aa		0.71	□□□□□ -2.3
TIF11	YMR260C	YSF3	P0C074	85 aa	Predicted RBP	0.7	□□□□□ -2.3
TIF11	YMR260C	RPB11	P38902	120 aa		0.7	□□□□□ -2.3
TIF11	YMR260C	SNF11	P38956	169 aa		0.7	□□□□□ -2.3
TIF11	YMR260C	GPI19	Q04082	140 aa		0.7	□□□□□ -2.3
TIF11	YMR260C	HPA2	Q06592	156 aa		0.7	□□□□□ -2.3
TIF11	YMR260C	FIT3	Q08907	204 aa		0.7	□□□□□ -2.3
TIF11	YMR260C	FCF2	Q12035	217 aa	Predicted RBP	0.7	□□□□□ -2.3
TIF11	YMR260C	WIP1	Q2V2P8	89 aa		0.7	□□□□□ -2.3
TIF11	YMR260C	YJL197C-A	P0C5P0	93 aa		0.69	□□□□□ -2.3
TIF11	YMR260C	YBR013C	P38215	129 aa		0.69	□□□□□ -2.3
TIF11	YMR260C	AIM4	P38305	123 aa	Predicted RBP	0.69	□□□□□ -2.3
TIF11	YMR260C	MVB12	P42939	101 aa		0.69	□□□□□ -2.3
TIF11	YMR260C	MIC27	P50945	234 aa		0.69	□□□□□ -2.3
TIF11	YMR260C	YIR021W-A	Q3E739	70 aa		0.69	□□□□□ -2.3
TIF11	YMR260C	RPO41	P13433	1351 aa	Known RBP	0.69	□□□□□ -2.3
TIF11	YMR260C	YCR099C	P25657	155 aa		0.68	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 53.3 ms