RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C TOA2P32774 122 aa3.22□□□□□ -1.89
CCS1YMR038C EMP24P32803 203 aaKnown RBP3.22□□□□□ -1.89
CCS1YMR038C YFR057WP43625 151 aa3.22□□□□□ -1.89
CCS1YMR038C PNC1P53184 216 aaKnown RBP3.22□□□□□ -1.89
CCS1YMR038C TIM11P81449 96 aaPredicted RBP3.22□□□□□ -1.89
CCS1YMR038C MRPS16Q02608 121 aa3.22□□□□□ -1.89
CCS1YMR038C YPR145C-AQ2V2P0 78 aa3.22□□□□□ -1.89
CCS1YMR038C YCR024C-BQ3E7Z8 88 aa3.22□□□□□ -1.89
CCS1YMR038C RPB3P16370 318 aaKnown RBP3.21□□□□□ -1.9
CCS1YMR038C SPO13P23624 291 aa3.21□□□□□ -1.9
CCS1YMR038C DSK2P48510 373 aa3.21□□□□□ -1.9
CCS1YMR038C TMA23Q03525 211 aa3.21□□□□□ -1.9
CCS1YMR038C AVO2Q04749 426 aa3.21□□□□□ -1.9
CCS1YMR038C FIT2Q08906 153 aa3.21□□□□□ -1.9
CCS1YMR038C OXA1P39952 402 aa3.2□□□□□ -1.9
CCS1YMR038C YEA4P40004 342 aa3.2□□□□□ -1.9
CCS1YMR038C IRC22P40006 225 aa3.2□□□□□ -1.9
CCS1YMR038C HAC1P41546 238 aa3.2□□□□□ -1.9
CCS1YMR038C YLR179CQ06252 201 aaKnown RBP3.2□□□□□ -1.9
CCS1YMR038C YOP1Q12402 180 aa3.2□□□□□ -1.9
CCS1YMR038C YDR157WA0A023PZE8 133 aa3.19□□□□□ -1.9
CCS1YMR038C HTB2P02294 131 aa3.19□□□□□ -1.9
CCS1YMR038C Q0255P03881 472 aa3.19□□□□□ -1.9
CCS1YMR038C CKS1P20486 150 aaKnown RBP3.19□□□□□ -1.9
CCS1YMR038C HSP12P22943 109 aaKnown RBP3.19□□□□□ -1.9
CCS1YMR038C AHT1P29589 182 aa3.19□□□□□ -1.9
CCS1YMR038C YPS5P53057 165 aa3.19□□□□□ -1.9
CCS1YMR038C TOM7P53507 60 aa3.19□□□□□ -1.9
CCS1YMR038C SNO1Q03144 224 aa3.19□□□□□ -1.9
CCS1YMR038C BER1Q06688 274 aaKnown RBP3.19□□□□□ -1.9
CCS1YMR038C VAR1P02381 398 aa3.18□□□□□ -1.9
CCS1YMR038C CUP2P15315 225 aa3.18□□□□□ -1.9
CCS1YMR038C QCR9P22289 66 aa3.18□□□□□ -1.9
CCS1YMR038C TRS20P38334 175 aa3.18□□□□□ -1.9
CCS1YMR038C RRT13P40042 185 aa3.18□□□□□ -1.9
CCS1YMR038C SPI1P40092 148 aa3.18□□□□□ -1.9
CCS1YMR038C YMR141CP40211 102 aa3.18□□□□□ -1.9
CCS1YMR038C SPC1P46965 94 aa3.18□□□□□ -1.9
CCS1YMR038C MRX11Q03079 207 aa3.18□□□□□ -1.9
CCS1YMR038C ATC1Q04005 294 aa3.18□□□□□ -1.9
CCS1YMR038C FCF2Q12035 217 aaPredicted RBP3.18□□□□□ -1.9
CCS1YMR038C ACB1P31787 87 aa3.17□□□□□ -1.9
CCS1YMR038C MRPL50P53724 139 aa3.17□□□□□ -1.9
CCS1YMR038C RAV2Q03956 351 aa3.17□□□□□ -1.9
CCS1YMR038C YMR253CQ04835 414 aa3.17□□□□□ -1.9
CCS1YMR038C SDO1Q07953 250 aaKnown RBP3.17□□□□□ -1.9
CCS1YMR038C MRS1P07266 363 aa3.16□□□□□ -1.9
CCS1YMR038C TAD2P47058 250 aa3.16□□□□□ -1.9
CCS1YMR038C COA4Q05809 96 aa3.16□□□□□ -1.9
CCS1YMR038C YOR015WQ12169 119 aa3.16□□□□□ -1.9
CCS1YMR038C YGR240C-AQ3E786 66 aa3.16□□□□□ -1.9
CCS1YMR038C YLL066W-BQ8TGJ7 56 aa3.16□□□□□ -1.9
CCS1YMR038C CPT1P17898 393 aa3.15□□□□□ -1.91
CCS1YMR038C MRPL20P22354 195 aaPredicted RBP3.15□□□□□ -1.91
CCS1YMR038C RPL16BP26785 198 aaKnown RBP3.15□□□□□ -1.91
CCS1YMR038C RIB4P50861 169 aaPredicted RBP3.15□□□□□ -1.91
CCS1YMR038C YGL194C-AQ2V2P6 80 aa3.15□□□□□ -1.91
CCS1YMR038C ASP1P38986 381 aaPredicted RBP3.14□□□□□ -1.91
CCS1YMR038C YNL217WP40152 326 aa3.14□□□□□ -1.91
CCS1YMR038C POG1P40473 351 aa3.14□□□□□ -1.91
CCS1YMR038C YNR066CP53752 436 aa3.14□□□□□ -1.91
CCS1YMR038C RRT15Q3E811 62 aa3.14□□□□□ -1.91
CCS1YMR038C SAR1P20606 190 aaKnown RBP3.13□□□□□ -1.91
CCS1YMR038C MRPL28P36527 147 aa3.13□□□□□ -1.91
CCS1YMR038C YHR173CP38864 112 aa3.13□□□□□ -1.91
CCS1YMR038C LOC1P43586 204 aaPredicted RBP3.13□□□□□ -1.91
CCS1YMR038C KEG1P43614 200 aa3.13□□□□□ -1.91
CCS1YMR038C YJL028WP47062 111 aa3.13□□□□□ -1.91
CCS1YMR038C DAD4P69851 72 aa3.13□□□□□ -1.91
CCS1YMR038C MRPS17Q03246 237 aaPredicted RBP3.13□□□□□ -1.91
CCS1YMR038C ANT1Q06497 328 aa3.13□□□□□ -1.91
CCS1YMR038C DFM1Q12743 341 aaKnown RBP3.13□□□□□ -1.91
CCS1YMR038C YBR200W-AQ3E755 54 aa3.13□□□□□ -1.91
CCS1YMR038C RTC6O14464 93 aa3.12□□□□□ -1.91
CCS1YMR038C YDR034C-AP0C289 58 aa3.12□□□□□ -1.91
CCS1YMR038C MAG1P22134 296 aaKnown RBP3.12□□□□□ -1.91
CCS1YMR038C HMX1P32339 317 aa3.12□□□□□ -1.91
CCS1YMR038C ACP1P32463 125 aa3.12□□□□□ -1.91
CCS1YMR038C RPL14AP36105 138 aaKnown RBP3.12□□□□□ -1.91
CCS1YMR038C RPL14BP38754 138 aaKnown RBP3.12□□□□□ -1.91
CCS1YMR038C SVP26P38869 228 aa3.12□□□□□ -1.91
CCS1YMR038C YIL163CP40448 117 aa3.12□□□□□ -1.91
CCS1YMR038C BRP1P53194 125 aa3.12□□□□□ -1.91
CCS1YMR038C YGR017WP53210 297 aa3.12□□□□□ -1.91
CCS1YMR038C DPP1Q05521 289 aa3.12□□□□□ -1.91
CCS1YMR038C UBI4P0CG63 381 aaKnown RBP3.11□□□□□ -1.91
CCS1YMR038C RNA15P25299 296 aaPredicted RBP3.11□□□□□ -1.91
CCS1YMR038C KTI12P34253 313 aaKnown RBP3.11□□□□□ -1.91
CCS1YMR038C YBR090CP38253 122 aa3.11□□□□□ -1.91
CCS1YMR038C YCH1P42937 148 aa3.11□□□□□ -1.91
CCS1YMR038C MGA1P53050 456 aa3.11□□□□□ -1.91
CCS1YMR038C YDR366CP87287 132 aa3.11□□□□□ -1.91
CCS1YMR038C YCR023CP25351 611 aa3.1□□□□□ -1.91
CCS1YMR038C AME1P38313 324 aa3.1□□□□□ -1.91
CCS1YMR038C YBR292CP38357 123 aa3.1□□□□□ -1.91
CCS1YMR038C GCV3P39726 170 aaPredicted RBP3.1□□□□□ -1.91
CCS1YMR038C AIM34Q03673 198 aa3.1□□□□□ -1.91
CCS1YMR038C PLP1Q04004 230 aa3.1□□□□□ -1.91
CCS1YMR038C FCF1Q05498 189 aaPredicted RBP3.1□□□□□ -1.91
CCS1YMR038C YLR042CQ07990 161 aa3.1□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms