RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeast

Gene SMD3, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMD3	YLR147C	VPS51	P36116	164 aa		0.71	□□□□□ -2.3
SMD3	YLR147C	SOL1	P50278	321 aa		0.71	□□□□□ -2.3
SMD3	YLR147C	YGL230C	P53074	147 aa		0.71	□□□□□ -2.3
SMD3	YLR147C	JAC1	P53193	184 aa		0.71	□□□□□ -2.3
SMD3	YLR147C	YNL140C	P53910	189 aa		0.71	□□□□□ -2.3
SMD3	YLR147C	HHT1	P61830	136 aa		0.71	□□□□□ -2.3
SMD3	YLR147C	VPS28	Q02767	242 aa		0.71	□□□□□ -2.3
SMD3	YLR147C	YDC1	Q02896	317 aa		0.71	□□□□□ -2.3
SMD3	YLR147C	HPT1	Q04178	221 aa	Known RBP	0.71	□□□□□ -2.3
SMD3	YLR147C	KEI1	Q06346	221 aa		0.71	□□□□□ -2.3
SMD3	YLR147C	YLR050C	Q12155	161 aa	Known RBP	0.71	□□□□□ -2.3
SMD3	YLR147C	POL2	P21951	2222 aa	Known RBP	0.7	□□□□□ -2.3
SMD3	YLR147C	CMD1	P06787	147 aa	Known RBP	0.7	□□□□□ -2.3
SMD3	YLR147C	YER121W	P40076	114 aa		0.7	□□□□□ -2.3
SMD3	YLR147C	YKR005C	Q02203	525 aa		0.7	□□□□□ -2.3
SMD3	YLR147C	PLP1	Q04004	230 aa		0.7	□□□□□ -2.3
SMD3	YLR147C	YPR127W	Q06494	345 aa		0.7	□□□□□ -2.3
SMD3	YLR147C	YOR214C	Q12282	236 aa		0.7	□□□□□ -2.3
SMD3	YLR147C	TY4B-H	P0C2J7	1802 aa		0.7	□□□□□ -2.3
SMD3	YLR147C	TY4B-J	P47024	1803 aa		0.7	□□□□□ -2.3
SMD3	YLR147C	TTI2	P47168	421 aa		0.69	□□□□□ -2.3
SMD3	YLR147C	PAC10	P48363	199 aa		0.69	□□□□□ -2.3
SMD3	YLR147C	TIM13	P53299	105 aa		0.69	□□□□□ -2.3
SMD3	YLR147C	TMA23	Q03525	211 aa		0.69	□□□□□ -2.3
SMD3	YLR147C	RIF1	P29539	1916 aa		0.69	□□□□□ -2.3
SMD3	YLR147C	QCR2	P07257	368 aa		0.68	□□□□□ -2.3
SMD3	YLR147C	CSH1	P38287	376 aa		0.68	□□□□□ -2.3
SMD3	YLR147C	HSK3	P69852	69 aa		0.68	□□□□□ -2.3
SMD3	YLR147C	RAD6	P06104	172 aa		0.67	□□□□□ -2.3
SMD3	YLR147C	FES1	P38260	290 aa		0.67	□□□□□ -2.3
SMD3	YLR147C	AME1	P38313	324 aa		0.67	□□□□□ -2.3
SMD3	YLR147C	GLR1	P41921	483 aa	Known RBP	0.67	□□□□□ -2.3
SMD3	YLR147C	XPT1	P47165	209 aa		0.67	□□□□□ -2.3
SMD3	YLR147C	TMA20	P89886	181 aa	Predicted RBP	0.67	□□□□□ -2.3
SMD3	YLR147C	THI74	Q04083	370 aa		0.67	□□□□□ -2.3
SMD3	YLR147C	RPS28B	P0C0X0	67 aa	Known RBP	0.66	□□□□□ -2.3
SMD3	YLR147C	YOL013W-A	P0C272	63 aa	Predicted RBP	0.66	□□□□□ -2.3
SMD3	YLR147C	YCR001W	P25347	104 aa		0.66	□□□□□ -2.3
SMD3	YLR147C	NUF2	P33895	451 aa		0.66	□□□□□ -2.3
SMD3	YLR147C	PTC1	P35182	281 aa		0.66	□□□□□ -2.3
SMD3	YLR147C	YEL073C	P39974	107 aa		0.66	□□□□□ -2.3
SMD3	YLR147C	PHB1	P40961	287 aa		0.66	□□□□□ -2.3
SMD3	YLR147C	YGL101W	P53144	215 aa		0.66	□□□□□ -2.3
SMD3	YLR147C	YDR476C	Q03362	224 aa		0.66	□□□□□ -2.3
SMD3	YLR147C	MAK3	Q03503	176 aa		0.66	□□□□□ -2.3
SMD3	YLR147C	SMD2	Q06217	110 aa	Known RBP	0.66	□□□□□ -2.3
SMD3	YLR147C	SYM1	Q06563	197 aa		0.66	□□□□□ -2.3
SMD3	YLR147C	YLR053C	Q12026	108 aa		0.66	□□□□□ -2.3
SMD3	YLR147C	RDI1	Q12434	202 aa		0.66	□□□□□ -2.3
SMD3	YLR147C	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.66	□□□□□ -2.3
SMD3	YLR147C	ECM29	P38737	1868 aa		0.65	□□□□□ -2.3
SMD3	YLR147C	ARC19	P33204	171 aa	Known RBP	0.65	□□□□□ -2.31
SMD3	YLR147C	DER1	P38307	211 aa		0.65	□□□□□ -2.31
SMD3	YLR147C	YEL028W	P39989	153 aa		0.65	□□□□□ -2.31
SMD3	YLR147C	ORM1	P53224	222 aa		0.65	□□□□□ -2.31
SMD3	YLR147C	LSM3	P57743	89 aa	Known RBP	0.65	□□□□□ -2.31
SMD3	YLR147C	HRD1	Q08109	551 aa		0.65	□□□□□ -2.31
SMD3	YLR147C	YPR202W	Q08993	238 aa		0.65	□□□□□ -2.31
SMD3	YLR147C	YLR046C	Q12253	270 aa		0.65	□□□□□ -2.31
SMD3	YLR147C	UBI4	P0CG63	381 aa	Known RBP	0.64	□□□□□ -2.31
SMD3	YLR147C	PRE1	P22141	198 aa	Known RBP	0.64	□□□□□ -2.31
SMD3	YLR147C	BUB2	P26448	306 aa	Predicted RBP	0.64	□□□□□ -2.31
SMD3	YLR147C	UBC6	P33296	250 aa	Predicted RBP	0.64	□□□□□ -2.31
SMD3	YLR147C	FIG1	P38224	298 aa		0.64	□□□□□ -2.31
SMD3	YLR147C	SLM6	P38343	150 aa		0.64	□□□□□ -2.31
SMD3	YLR147C	LIP1	Q03579	150 aa		0.64	□□□□□ -2.31
SMD3	YLR147C	NSL1	Q12143	216 aa		0.64	□□□□□ -2.31
SMD3	YLR147C	FCY1	Q12178	158 aa		0.64	□□□□□ -2.31
SMD3	YLR147C	UBR1	P19812	1950 aa		0.64	□□□□□ -2.31
SMD3	YLR147C	CCW14	O13547	238 aa		0.63	□□□□□ -2.31
SMD3	YLR147C	ATP5	P09457	212 aa		0.63	□□□□□ -2.31
SMD3	YLR147C	YJL197C-A	P0C5P0	93 aa		0.63	□□□□□ -2.31
SMD3	YLR147C	RPL30	P14120	105 aa	Known RBP	0.63	□□□□□ -2.31
SMD3	YLR147C	CDC39	P25655	2108 aa	Known RBP	0.63	□□□□□ -2.31
SMD3	YLR147C	CCC1	P47818	322 aa		0.63	□□□□□ -2.31
SMD3	YLR147C	YGL193C	P53097	103 aa		0.63	□□□□□ -2.31
SMD3	YLR147C	NQM1	P53228	333 aa	Predicted RBP	0.63	□□□□□ -2.31
SMD3	YLR147C	YML079W	Q03629	201 aa		0.63	□□□□□ -2.31
SMD3	YLR147C	UIP4	Q08926	304 aa		0.63	□□□□□ -2.31
SMD3	YLR147C	YDL157C	Q12082	118 aa		0.63	□□□□□ -2.31
SMD3	YLR147C	PET20	Q99373	253 aa		0.63	□□□□□ -2.31
SMD3	YLR147C	HKR1	P41809	1802 aa		0.63	□□□□□ -2.31
SMD3	YLR147C	UTP10	P42945	1769 aa	Known RBP	0.62	□□□□□ -2.31
SMD3	YLR147C	QCR6	P00127	147 aa		0.62	□□□□□ -2.31
SMD3	YLR147C	HAP2	P06774	265 aa		0.62	□□□□□ -2.31
SMD3	YLR147C	PBI2	P0CT04	75 aa	Known RBP	0.62	□□□□□ -2.31
SMD3	YLR147C	SRP102	P36057	244 aa	Predicted RBP	0.62	□□□□□ -2.31
SMD3	YLR147C	HTD2	P38790	280 aa	Known RBP	0.62	□□□□□ -2.31
SMD3	YLR147C	HHY1	P39982	102 aa		0.62	□□□□□ -2.31
SMD3	YLR147C	YGR269W	P40326	108 aa		0.62	□□□□□ -2.31
SMD3	YLR147C	DLS1	P40366	167 aa		0.62	□□□□□ -2.31
SMD3	YLR147C	APQ12	P40532	138 aa		0.62	□□□□□ -2.31
SMD3	YLR147C	FIP1	P45976	327 aa		0.62	□□□□□ -2.31
SMD3	YLR147C	YNR064C	P53750	290 aa		0.62	□□□□□ -2.31
SMD3	YLR147C	EFG1	Q3E705	233 aa	Known RBP	0.62	□□□□□ -2.31
SMD3	YLR147C	URA2	P07259	2214 aa	Known RBP	0.62	□□□□□ -2.31
SMD3	YLR147C	KIN28	P06242	306 aa		0.61	□□□□□ -2.31
SMD3	YLR147C	SPS2	P08459	502 aa		0.61	□□□□□ -2.31
SMD3	YLR147C	YPT31	P38555	223 aa	Known RBP	0.61	□□□□□ -2.31
SMD3	YLR147C	EFM5	P53200	248 aa	Known RBP	0.61	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms