RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C YMR315WQ04869 349 aaKnown RBP2.17□□□□□ -2.06
USB1YLR132C SPC2Q04969 178 aa2.17□□□□□ -2.06
USB1YLR132C FSF1Q12029 327 aaKnown RBP2.17□□□□□ -2.06
USB1YLR132C PST2Q12335 198 aaKnown RBP2.17□□□□□ -2.06
USB1YLR132C ATG40Q99325 256 aa2.17□□□□□ -2.06
USB1YLR132C ROX3P25046 220 aa2.16□□□□□ -2.06
USB1YLR132C CCS1P40202 249 aaKnown RBP2.16□□□□□ -2.06
USB1YLR132C GAT4P40569 121 aa2.16□□□□□ -2.06
USB1YLR132C HYM1P32464 399 aa2.15□□□□□ -2.07
USB1YLR132C SHE2P36068 246 aaKnown RBP RIP-Chip data2.15□□□□□ -2.07not detected
USB1YLR132C PDX3P38075 228 aaKnown RBP2.15□□□□□ -2.07
USB1YLR132C YBR219CP38317 127 aa2.15□□□□□ -2.07
USB1YLR132C GLE2P40066 365 aa2.15□□□□□ -2.07
USB1YLR132C YNR077CP53758 84 aa2.15□□□□□ -2.07
USB1YLR132C YMR099CQ03161 297 aaKnown RBP2.15□□□□□ -2.07
USB1YLR132C HNT1Q04344 158 aaKnown RBP2.15□□□□□ -2.07
USB1YLR132C NOC4Q06512 552 aaPredicted RBP2.15□□□□□ -2.07
USB1YLR132C YPD1Q07688 167 aa2.15□□□□□ -2.07
USB1YLR132C MRS4P23500 304 aa2.14□□□□□ -2.07
USB1YLR132C YCR101CP25607 182 aa2.14□□□□□ -2.07
USB1YLR132C UBC8P28263 218 aa2.14□□□□□ -2.07
USB1YLR132C YKR045CP36138 183 aa2.14□□□□□ -2.07
USB1YLR132C YGL204CP53089 101 aa2.14□□□□□ -2.07
USB1YLR132C GIM3P53900 129 aa2.14□□□□□ -2.07
USB1YLR132C RRP17Q04031 235 aaPredicted RBP2.14□□□□□ -2.07
USB1YLR132C FIT1Q04433 528 aa2.14□□□□□ -2.07
USB1YLR132C YOR192C-CQ3E736 78 aa2.14□□□□□ -2.07
USB1YLR132C YOS1Q3E834 85 aa2.14□□□□□ -2.07
USB1YLR132C TAR1Q8TGM6 124 aa2.14□□□□□ -2.07
USB1YLR132C QCR7P00128 127 aa2.13□□□□□ -2.07
USB1YLR132C YGL041W-AP0C5N3 154 aa2.13□□□□□ -2.07
USB1YLR132C RFC2P40348 353 aa2.13□□□□□ -2.07
USB1YLR132C GRX3Q03835 250 aa2.13□□□□□ -2.07
USB1YLR132C YNG1Q08465 219 aa2.13□□□□□ -2.07
USB1YLR132C DGK1Q12382 290 aa2.13□□□□□ -2.07
USB1YLR132C COX9P07255 59 aa2.12□□□□□ -2.07
USB1YLR132C MRS1P07266 363 aa2.12□□□□□ -2.07
USB1YLR132C ATP15P21306 62 aa2.12□□□□□ -2.07
USB1YLR132C ARO7P32178 256 aa2.12□□□□□ -2.07
USB1YLR132C YER137CP40083 148 aaKnown RBP2.12□□□□□ -2.07
USB1YLR132C COX12Q01519 83 aa2.12□□□□□ -2.07
USB1YLR132C ANT1Q06497 328 aa2.12□□□□□ -2.07
USB1YLR132C YOL118CQ08259 102 aa2.12□□□□□ -2.07
USB1YLR132C MBF1O14467 151 aaKnown RBP2.11□□□□□ -2.07
USB1YLR132C BUD23P25627 275 aaPredicted RBP2.11□□□□□ -2.07
USB1YLR132C MRPL38P35996 138 aaPredicted RBP2.11□□□□□ -2.07
USB1YLR132C YER135CP40082 130 aa2.11□□□□□ -2.07
USB1YLR132C YJL218WP40892 196 aaKnown RBP2.11□□□□□ -2.07
USB1YLR132C GNA1P43577 159 aaPredicted RBP2.11□□□□□ -2.07
USB1YLR132C PAU12P53343 120 aa2.11□□□□□ -2.07
USB1YLR132C CUE4Q04201 117 aaPredicted RBP2.11□□□□□ -2.07
USB1YLR132C NMA1Q06178 401 aaKnown RBP2.11□□□□□ -2.07
USB1YLR132C IGO2Q9P305 131 aa2.11□□□□□ -2.07
USB1YLR132C CNB1P25296 175 aa2.1□□□□□ -2.07
USB1YLR132C OCH1P31755 480 aa2.1□□□□□ -2.07
USB1YLR132C YBL010CP32788 280 aa2.1□□□□□ -2.07
USB1YLR132C TMA22P47089 198 aaPredicted RBP2.1□□□□□ -2.07
USB1YLR132C YMR252CQ04814 134 aa2.1□□□□□ -2.07
USB1YLR132C IRC23Q08416 157 aa2.1□□□□□ -2.07
USB1YLR132C YPR013CQ12145 317 aa2.1□□□□□ -2.07
USB1YLR132C ODC2Q99297 307 aa2.1□□□□□ -2.07
USB1YLR132C YLR236CA0A023PZG4 107 aa2.09□□□□□ -2.07
USB1YLR132C RPB7P34087 171 aa2.09□□□□□ -2.07
USB1YLR132C PAU24P38155 120 aa2.09□□□□□ -2.07
USB1YLR132C PDS1P40316 373 aaPredicted RBP2.09□□□□□ -2.07
USB1YLR132C PAM16P42949 149 aa2.09□□□□□ -2.07
USB1YLR132C DIE2P50076 525 aa2.09□□□□□ -2.07
USB1YLR132C YLR031WQ07978 186 aa2.09□□□□□ -2.07
USB1YLR132C IDP1P21954 428 aaKnown RBP2.08□□□□□ -2.08
USB1YLR132C YGL010WP25338 174 aa2.08□□□□□ -2.08
USB1YLR132C SFK1P35735 353 aa2.08□□□□□ -2.08
USB1YLR132C RPL13BP40212 199 aaKnown RBP2.08□□□□□ -2.08
USB1YLR132C TDA4P47153 279 aa2.08□□□□□ -2.08
USB1YLR132C SPC24Q04477 213 aa2.08□□□□□ -2.08
USB1YLR132C YLR162WQ06235 118 aa2.08□□□□□ -2.08
USB1YLR132C DGA1Q08650 418 aa2.08□□□□□ -2.08
USB1YLR132C RPL13AQ12690 199 aaPredicted RBP2.08□□□□□ -2.08
USB1YLR132C YDL085C-AQ3E7B7 68 aaKnown RBP2.08□□□□□ -2.08
USB1YLR132C PAU2P32612 120 aa2.07□□□□□ -2.08
USB1YLR132C FMP23P38231 175 aa2.07□□□□□ -2.08
USB1YLR132C KNH1P50112 268 aa2.07□□□□□ -2.08
USB1YLR132C POP3P53833 195 aaPredicted RBP2.07□□□□□ -2.08
USB1YLR132C GRX5Q02784 150 aa2.07□□□□□ -2.08
USB1YLR132C PET54P10834 293 aa2.06□□□□□ -2.08
USB1YLR132C PAN3P36102 679 aaPredicted RBP2.06□□□□□ -2.08
USB1YLR132C SHG1P38337 142 aa2.06□□□□□ -2.08
USB1YLR132C YPT31P38555 223 aaKnown RBP2.06□□□□□ -2.08
USB1YLR132C YEA4P40004 342 aa2.06□□□□□ -2.08
USB1YLR132C YER134CP40081 178 aa2.06□□□□□ -2.08
USB1YLR132C LST8P41318 303 aa2.06□□□□□ -2.08
USB1YLR132C SKI6P46948 246 aaPredicted RBP2.06□□□□□ -2.08
USB1YLR132C GPI14P47088 403 aaKnown RBP2.06□□□□□ -2.08
USB1YLR132C YPR108W-AQ3E7B3 70 aa2.06□□□□□ -2.08
USB1YLR132C YLR365WQ7LIF2 110 aa2.06□□□□□ -2.08
USB1YLR132C QCR8P08525 94 aa2.05□□□□□ -2.08
USB1YLR132C AHC2P25649 128 aa2.05□□□□□ -2.08
USB1YLR132C UPS2P35200 230 aa2.05□□□□□ -2.08
USB1YLR132C YHR138CP38841 114 aaPredicted RBP2.05□□□□□ -2.08
USB1YLR132C SER2P42941 309 aa2.05□□□□□ -2.08
USB1YLR132C ARP3P47117 449 aaKnown RBP2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms