RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C YOL118CQ08259 102 aa1.92□□□□□ -2.1
SED5YLR026C LSO2Q3E772 92 aaKnown RBP1.92□□□□□ -2.1
SED5YLR026C YKL068W-AQ3E826 78 aa1.92□□□□□ -2.1
SED5YLR026C YPR170W-BP0C5R9 85 aa1.91□□□□□ -2.1
SED5YLR026C YLR156WP0CE96 114 aa1.91□□□□□ -2.1
SED5YLR026C YLR159WP0CE97 114 aa1.91□□□□□ -2.1
SED5YLR026C YLR161WP0CE98 114 aa1.91□□□□□ -2.1
SED5YLR026C YNL200CP40165 246 aaKnown RBP1.91□□□□□ -2.1
SED5YLR026C BXI1P48558 297 aa1.91□□□□□ -2.1
SED5YLR026C DOC1P53068 250 aa1.91□□□□□ -2.1
SED5YLR026C YGL204CP53089 101 aa1.91□□□□□ -2.1
SED5YLR026C PAU12P53343 120 aa1.91□□□□□ -2.1
SED5YLR026C YMR252CQ04814 134 aa1.91□□□□□ -2.1
SED5YLR026C LCL2Q08045 131 aa1.91□□□□□ -2.1
SED5YLR026C COX9P07255 59 aa1.9□□□□□ -2.11
SED5YLR026C PET54P10834 293 aa1.9□□□□□ -2.11
SED5YLR026C YCR001WP25347 104 aa1.9□□□□□ -2.11
SED5YLR026C PAU24P38155 120 aa1.9□□□□□ -2.11
SED5YLR026C YHR138CP38841 114 aaPredicted RBP1.9□□□□□ -2.11
SED5YLR026C SVP26P38869 228 aa1.9□□□□□ -2.11
SED5YLR026C LST8P41318 303 aa1.9□□□□□ -2.11
SED5YLR026C IRC18P47056 224 aa1.9□□□□□ -2.11
SED5YLR026C ARO8P53090 500 aaKnown RBP1.9□□□□□ -2.11
SED5YLR026C HNT1Q04344 158 aaKnown RBP1.9□□□□□ -2.11
SED5YLR026C YPR013CQ12145 317 aa1.9□□□□□ -2.11
SED5YLR026C CDC7P06243 507 aa1.89□□□□□ -2.11
SED5YLR026C RPB7P34087 171 aa1.89□□□□□ -2.11
SED5YLR026C SFK1P35735 353 aa1.89□□□□□ -2.11
SED5YLR026C YHR022CP38763 256 aa1.89□□□□□ -2.11
SED5YLR026C VMA22P38784 181 aa1.89□□□□□ -2.11
SED5YLR026C SNU13P39990 126 aaKnown RBP1.89□□□□□ -2.11
SED5YLR026C YKE4P40544 346 aa1.89□□□□□ -2.11
SED5YLR026C PAM16P42949 149 aa1.89□□□□□ -2.11
SED5YLR026C PDR17P53844 350 aa1.89□□□□□ -2.11
SED5YLR026C CYT2Q00873 224 aa1.89□□□□□ -2.11
SED5YLR026C YOR011W-AQ3E807 68 aa1.89□□□□□ -2.11
SED5YLR026C RPL28P02406 149 aaKnown RBP1.88□□□□□ -2.11
SED5YLR026C PAU2P32612 120 aa1.88□□□□□ -2.11
SED5YLR026C SHE2P36068 246 aaKnown RBP RIP-Chip data1.88□□□□□ -2.11not detected
SED5YLR026C RRT1P38192 103 aa1.88□□□□□ -2.11
SED5YLR026C ERV15P38312 142 aa1.88□□□□□ -2.11
SED5YLR026C YER135CP40082 130 aa1.88□□□□□ -2.11
SED5YLR026C PDS1P40316 373 aaPredicted RBP1.88□□□□□ -2.11
SED5YLR026C POR2P40478 281 aa1.88□□□□□ -2.11
SED5YLR026C DIE2P50076 525 aa1.88□□□□□ -2.11
SED5YLR026C YLR099W-AQ3E798 87 aa1.88□□□□□ -2.11
SED5YLR026C TDA8Q6B2U8 126 aa1.88□□□□□ -2.11
SED5YLR026C RPL27BP0C2H7 136 aaKnown RBP1.87□□□□□ -2.11
SED5YLR026C SNF11P38956 169 aa1.87□□□□□ -2.11
SED5YLR026C RPL33BP41056 107 aaKnown RBP1.87□□□□□ -2.11
SED5YLR026C GPI14P47088 403 aaKnown RBP1.87□□□□□ -2.11
SED5YLR026C HRD1Q08109 551 aa1.87□□□□□ -2.11
SED5YLR026C VAM10Q08474 114 aa1.87□□□□□ -2.11
SED5YLR026C RAD28Q12021 506 aa1.87□□□□□ -2.11
SED5YLR026C ODC2Q99297 307 aa1.87□□□□□ -2.11
SED5YLR026C AHC2P25649 128 aa1.86□□□□□ -2.11
SED5YLR026C PGD1P40356 397 aa1.86□□□□□ -2.11
SED5YLR026C YIP3P53633 176 aa1.86□□□□□ -2.11
SED5YLR026C GRX5Q02784 150 aa1.86□□□□□ -2.11
SED5YLR026C TLG1Q03322 224 aa1.86□□□□□ -2.11
SED5YLR026C YPL162CQ12042 273 aa1.86□□□□□ -2.11
SED5YLR026C YPR108W-AQ3E7B3 70 aa1.86□□□□□ -2.11
SED5YLR026C YCR075W-AQ3E830 75 aa1.86□□□□□ -2.11
SED5YLR026C YLR365WQ7LIF2 110 aa1.86□□□□□ -2.11
SED5YLR026C RPL2AP0CX45 254 aaKnown RBP1.85□□□□□ -2.11
SED5YLR026C RPL2BP0CX46 254 aaKnown RBP1.85□□□□□ -2.11
SED5YLR026C RPS11AP0CX47 156 aaKnown RBP1.85□□□□□ -2.11
SED5YLR026C RPS11BP0CX48 156 aaKnown RBP1.85□□□□□ -2.11
SED5YLR026C NVJ1P38881 321 aa1.85□□□□□ -2.11
SED5YLR026C GPI2P46961 280 aa1.85□□□□□ -2.11
SED5YLR026C YJR015WP47090 510 aa1.85□□□□□ -2.11
SED5YLR026C YGR042WP53227 271 aa1.85□□□□□ -2.11
SED5YLR026C YNR077CP53758 84 aa1.85□□□□□ -2.11
SED5YLR026C LSM7P53905 115 aaKnown RBP1.85□□□□□ -2.11
SED5YLR026C MRPS17Q03246 237 aaPredicted RBP1.85□□□□□ -2.11
SED5YLR026C YML108WQ03759 105 aa1.85□□□□□ -2.11
SED5YLR026C SPC24Q04477 213 aa1.85□□□□□ -2.11
SED5YLR026C HUG1Q6Q5K6 68 aa1.85□□□□□ -2.11
SED5YLR026C GCN3P14741 305 aa1.84□□□□□ -2.11
SED5YLR026C SEN2P16658 377 aa1.84□□□□□ -2.11
SED5YLR026C YBL071CP38185 102 aa1.84□□□□□ -2.11
SED5YLR026C QCR7P00128 127 aa1.83□□□□□ -2.12
SED5YLR026C ATP15P21306 62 aa1.83□□□□□ -2.12
SED5YLR026C TRR1P29509 319 aaKnown RBP1.83□□□□□ -2.12
SED5YLR026C DSE2P38844 325 aa1.83□□□□□ -2.12
SED5YLR026C GLE2P40066 365 aa1.83□□□□□ -2.12
SED5YLR026C SPC1P46965 94 aa1.83□□□□□ -2.12
SED5YLR026C YGR017WP53210 297 aa1.83□□□□□ -2.12
SED5YLR026C TOM7P53507 60 aa1.83□□□□□ -2.12
SED5YLR026C UBC7Q02159 165 aa1.83□□□□□ -2.12
SED5YLR026C COA4Q05809 96 aa1.83□□□□□ -2.12
SED5YLR026C YGL258W-AQ3E740 77 aa1.83□□□□□ -2.12
SED5YLR026C HTB2P02294 131 aa1.82□□□□□ -2.12
SED5YLR026C GIM3P53900 129 aa1.82□□□□□ -2.12
SED5YLR026C DYN2Q02647 92 aa1.82□□□□□ -2.12
SED5YLR026C YLR162WQ06235 118 aa1.82□□□□□ -2.12
SED5YLR026C FSF1Q12029 327 aaKnown RBP1.82□□□□□ -2.12
SED5YLR026C TSC3Q3E790 80 aa1.82□□□□□ -2.12
SED5YLR026C YNL146C-AQ3E7Z1 64 aa1.82□□□□□ -2.12
SED5YLR026C YFR032C-BQ8TGU2 87 aa1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms