RNA–Protein interactions for RNA: YKL193C

SDS22, Transcript of Regulatory subunit of the type 1 protein phosphatase (PP1) Glc7p, yeastyeast

Gene SDS22, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS22YKL193C YOR385WQ08909 290 aa0.03□□□□□ -2.4
SDS22YKL193C SNF2P22082 1703 aa0.03□□□□□ -2.4
SDS22YKL193C YSF3P0C074 85 aaPredicted RBP0.02□□□□□ -2.41
SDS22YKL193C RME1P32338 300 aaKnown RBP0.02□□□□□ -2.41
SDS22YKL193C RPS29BP41058 56 aaKnown RBP0.02□□□□□ -2.41
SDS22YKL193C LSM1P47017 172 aaKnown RBP0.02□□□□□ -2.41
SDS22YKL193C BRP1P53194 125 aa0.02□□□□□ -2.41
SDS22YKL193C PET20Q99373 253 aa0.02□□□□□ -2.41
SDS22YKL193C LAA1P39526 2014 aa0.02□□□□□ -2.41
SDS22YKL193C PFY1P07274 126 aa0.01□□□□□ -2.41
SDS22YKL193C SUI1P32911 108 aaKnown RBP0.01□□□□□ -2.41
SDS22YKL193C RPS1AP33442 255 aaKnown RBP0.01□□□□□ -2.41
SDS22YKL193C FIG1P38224 298 aa0.01□□□□□ -2.41
SDS22YKL193C LSM8P47093 109 aaKnown RBP0.01□□□□□ -2.41
SDS22YKL193C YGL149WP53116 101 aa0.01□□□□□ -2.41
SDS22YKL193C YLR194CQ05777 254 aa0.01□□□□□ -2.41
SDS22YKL193C MRPL31P14063 131 aaPredicted RBP0□□□□□ -2.41
SDS22YKL193C MRPL44P19956 98 aa0□□□□□ -2.41
SDS22YKL193C POR2P40478 281 aa0□□□□□ -2.41
SDS22YKL193C RAV2Q03956 351 aa0□□□□□ -2.41
SDS22YKL193C YLR296WQ05898 108 aa0□□□□□ -2.41
SDS22YKL193C RTC6O14464 93 aa-0.01□□□□□ -2.41
SDS22YKL193C MRPL11P36521 249 aaPredicted RBP-0.01□□□□□ -2.41
SDS22YKL193C SPG1P50088 95 aa-0.01□□□□□ -2.41
SDS22YKL193C PKR1Q03880 122 aaKnown RBP-0.01□□□□□ -2.41
SDS22YKL193C GTT2Q12390 233 aa-0.01□□□□□ -2.41
SDS22YKL193C SNT2P53127 1403 aa-0.02□□□□□ -2.41
SDS22YKL193C AIM18P38884 321 aa-0.02□□□□□ -2.41
SDS22YKL193C YJR128WP47162 119 aa-0.02□□□□□ -2.41
SDS22YKL193C LDB18Q07887 179 aa-0.02□□□□□ -2.41
SDS22YKL193C MED11Q99278 115 aa-0.02□□□□□ -2.41
SDS22YKL193C PET54P10834 293 aa-0.03□□□□□ -2.41
SDS22YKL193C HAP3P13434 144 aa-0.03□□□□□ -2.41
SDS22YKL193C AUA1P32450 94 aa-0.03□□□□□ -2.41
SDS22YKL193C GSP1P32835 219 aaKnown RBP-0.03□□□□□ -2.41
SDS22YKL193C QCR10P37299 77 aa-0.03□□□□□ -2.41
SDS22YKL193C YDR366CP87287 132 aa-0.03□□□□□ -2.41
SDS22YKL193C YMR320WQ04897 101 aa-0.03□□□□□ -2.41
SDS22YKL193C ATP14Q12349 124 aa-0.03□□□□□ -2.41
SDS22YKL193C GSC2P40989 1895 aa-0.03□□□□□ -2.41
SDS22YKL193C YOR1P53049 1477 aa-0.03□□□□□ -2.41
SDS22YKL193C EMP24P32803 203 aaKnown RBP-0.04□□□□□ -2.42
SDS22YKL193C SRX1P36077 127 aa-0.04□□□□□ -2.42
SDS22YKL193C YFR035CP43608 114 aa-0.04□□□□□ -2.42
SDS22YKL193C COF1Q03048 143 aaKnown RBP-0.04□□□□□ -2.42
SDS22YKL193C PAU21P0CE86 164 aa-0.05□□□□□ -2.42
SDS22YKL193C PAU22P0CE87 164 aa-0.05□□□□□ -2.42
SDS22YKL193C HSP10P38910 106 aa-0.05□□□□□ -2.42
SDS22YKL193C YIL163CP40448 117 aa-0.05□□□□□ -2.42
SDS22YKL193C MOG1P47123 218 aa-0.05□□□□□ -2.42
SDS22YKL193C SDH7Q04401 133 aa-0.05□□□□□ -2.42
SDS22YKL193C SPC3Q12133 184 aa-0.05□□□□□ -2.42
SDS22YKL193C TY4B-JP47024 1803 aa-0.06□□□□□ -2.42
SDS22YKL193C YCR050CP25630 102 aa-0.06□□□□□ -2.42
SDS22YKL193C PRS3P38689 320 aaKnown RBP-0.06□□□□□ -2.42
SDS22YKL193C YAL064WP39711 94 aa-0.06□□□□□ -2.42
SDS22YKL193C YGR017WP53210 297 aa-0.06□□□□□ -2.42
SDS22YKL193C HHO1P53551 258 aa-0.06□□□□□ -2.42
SDS22YKL193C FCF2Q12035 217 aaPredicted RBP-0.06□□□□□ -2.42
SDS22YKL193C TY1B-HO13535 1793 aa-0.06□□□□□ -2.42
SDS22YKL193C SUA7P29055 345 aaPredicted RBP-0.07□□□□□ -2.42
SDS22YKL193C HPM1P40481 377 aa-0.07□□□□□ -2.42
SDS22YKL193C YGR039WP53225 103 aa-0.07□□□□□ -2.42
SDS22YKL193C ARL3Q02804 198 aa-0.07□□□□□ -2.42
SDS22YKL193C ENV10Q99382 181 aa-0.07□□□□□ -2.42
SDS22YKL193C URA2P07259 2214 aaKnown RBP-0.07□□□□□ -2.42
SDS22YKL193C RBL2P48606 106 aaKnown RBP-0.08□□□□□ -2.42
SDS22YKL193C EFM5P53200 248 aaKnown RBP-0.08□□□□□ -2.42
SDS22YKL193C TLG1Q03322 224 aa-0.08□□□□□ -2.42
SDS22YKL193C YRF1-3P0CX14 1859 aa-0.09□□□□□ -2.42
SDS22YKL193C YRF1-7P0CX15 1859 aa-0.09□□□□□ -2.42
SDS22YKL193C RPL36BO14455 100 aaKnown RBP-0.09□□□□□ -2.42
SDS22YKL193C RPL36AP05745 100 aaPredicted RBP-0.09□□□□□ -2.42
SDS22YKL193C RPL14AP36105 138 aaKnown RBP-0.09□□□□□ -2.42
SDS22YKL193C RPL14BP38754 138 aaKnown RBP-0.09□□□□□ -2.42
SDS22YKL193C LCL1Q02786 101 aa-0.09□□□□□ -2.42
SDS22YKL193C ELC1Q03071 99 aa-0.09□□□□□ -2.42
SDS22YKL193C SMD2Q06217 110 aaKnown RBP-0.09□□□□□ -2.42
SDS22YKL193C YDR010CQ12426 110 aa-0.09□□□□□ -2.42
SDS22YKL193C YGR240C-AQ3E786 66 aa-0.09□□□□□ -2.42
SDS22YKL193C RPC19P28000 142 aaKnown RBP-0.1□□□□□ -2.43
SDS22YKL193C YEA6P39953 335 aa-0.1□□□□□ -2.43
SDS22YKL193C ICS3P47034 131 aa-0.1□□□□□ -2.43
SDS22YKL193C OCA6Q12454 224 aa-0.1□□□□□ -2.43
SDS22YKL193C YOL164W-AQ3E7A5 60 aa-0.1□□□□□ -2.43
SDS22YKL193C TRS20P38334 175 aa-0.11□□□□□ -2.43
SDS22YKL193C HPA2Q06592 156 aa-0.11□□□□□ -2.43
SDS22YKL193C RPL22AP05749 121 aaKnown RBP-0.12□□□□□ -2.43
SDS22YKL193C TVP18Q04767 167 aa-0.12□□□□□ -2.43
SDS22YKL193C TRM732Q03496 1420 aa-0.13□□□□□ -2.43
SDS22YKL193C ARC19P33204 171 aaKnown RBP-0.13□□□□□ -2.43
SDS22YKL193C PHS1P40857 217 aa-0.13□□□□□ -2.43
SDS22YKL193C YGL041C-BQ3E750 60 aa-0.13□□□□□ -2.43
SDS22YKL193C BLM10P43583 2143 aa-0.13□□□□□ -2.43
SDS22YKL193C BNI1P41832 1953 aa-0.14□□□□□ -2.43
SDS22YKL193C YAP3P38749 330 aa-0.14□□□□□ -2.43
SDS22YKL193C SEC16P48415 2195 aaKnown RBP-0.15□□□□□ -2.43
SDS22YKL193C YHR173CP38864 112 aa-0.15□□□□□ -2.43
SDS22YKL193C MPC1P53157 130 aaKnown RBP-0.15□□□□□ -2.43
SDS22YKL193C ERV14P53173 138 aa-0.15□□□□□ -2.43
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms