RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C YKL070WP36087 169 aa2.82□□□□□ -1.96
SSM4YIL030C MIC12P38341 106 aa2.82□□□□□ -1.96
SSM4YIL030C YPL077CQ02831 240 aa2.82□□□□□ -1.96
SSM4YIL030C AGA1P32323 725 aa2.82□□□□□ -1.96
SSM4YIL030C YHR210CP38893 341 aa2.82□□□□□ -1.96
SSM4YIL030C SDS23P53172 527 aa2.82□□□□□ -1.96
SSM4YIL030C DAD3P69850 94 aa2.82□□□□□ -1.96
SSM4YIL030C YDR366CP87287 132 aa2.82□□□□□ -1.96
SSM4YIL030C TSA2Q04120 196 aa2.82□□□□□ -1.96
SSM4YIL030C ATG39Q06159 398 aa2.82□□□□□ -1.96
SSM4YIL030C YMR105W-AQ8TGS8 64 aa2.82□□□□□ -1.96
SSM4YIL030C PAM17P36147 197 aa2.82□□□□□ -1.96
SSM4YIL030C PAU7P39545 55 aa2.82□□□□□ -1.96
SSM4YIL030C WSC2P53832 503 aa2.82□□□□□ -1.96
SSM4YIL030C YDR102CQ03864 110 aa2.82□□□□□ -1.96
SSM4YIL030C YAP6Q03935 383 aa2.82□□□□□ -1.96
SSM4YIL030C GPI19Q04082 140 aa2.82□□□□□ -1.96
SSM4YIL030C IMG2P25642 146 aaPredicted RBP2.81□□□□□ -1.96
SSM4YIL030C UBC13P52490 153 aa2.81□□□□□ -1.96
SSM4YIL030C YOR376WQ08900 122 aa2.81□□□□□ -1.96
SSM4YIL030C SMT3Q12306 101 aaKnown RBP2.81□□□□□ -1.96
SSM4YIL030C YIR021W-AQ3E739 70 aa2.81□□□□□ -1.96
SSM4YIL030C PAI3P01094 68 aa2.81□□□□□ -1.96
SSM4YIL030C VAR1P02381 398 aa2.81□□□□□ -1.96
SSM4YIL030C MRPL20P22354 195 aaPredicted RBP2.81□□□□□ -1.96
SSM4YIL030C TIF34P40217 347 aaKnown RBP2.81□□□□□ -1.96
SSM4YIL030C YIL163CP40448 117 aa2.81□□□□□ -1.96
SSM4YIL030C GEP3Q08622 556 aa2.81□□□□□ -1.96
SSM4YIL030C MRPL11P36521 249 aaPredicted RBP2.81□□□□□ -1.96
SSM4YIL030C YBL071CP38185 102 aa2.81□□□□□ -1.96
SSM4YIL030C ADH6Q04894 360 aaKnown RBP2.81□□□□□ -1.96
SSM4YIL030C YHR214C-DP0CX93 97 aa2.8□□□□□ -1.96
SSM4YIL030C MSL1P40567 111 aaPredicted RBP2.8□□□□□ -1.96
SSM4YIL030C SDC1Q03323 175 aa2.8□□□□□ -1.96
SSM4YIL030C RPS2P25443 254 aaKnown RBP2.8□□□□□ -1.96
SSM4YIL030C NRM1P53718 249 aa2.8□□□□□ -1.96
SSM4YIL030C GTO3Q04806 366 aa2.8□□□□□ -1.96
SSM4YIL030C NUD1P32336 851 aa2.8□□□□□ -1.96
SSM4YIL030C SFT2P38166 215 aa2.8□□□□□ -1.96
SSM4YIL030C YNL217WP40152 326 aa2.8□□□□□ -1.96
SSM4YIL030C YLR194CQ05777 254 aa2.8□□□□□ -1.96
SSM4YIL030C MSA2P36157 363 aa2.79□□□□□ -1.96
SSM4YIL030C ADH5P38113 351 aaKnown RBP2.79□□□□□ -1.96
SSM4YIL030C LST8P41318 303 aa2.79□□□□□ -1.96
SSM4YIL030C YFR045WP43617 309 aa2.79□□□□□ -1.96
SSM4YIL030C YOR029WQ12243 111 aa2.79□□□□□ -1.96
SSM4YIL030C ERP4Q12450 207 aa2.79□□□□□ -1.96
SSM4YIL030C CDC39P25655 2108 aaKnown RBP2.79□□□□□ -1.96
SSM4YIL030C RPL27AP0C2H6 136 aaKnown RBP2.79□□□□□ -1.96
SSM4YIL030C CDC26P14724 124 aa2.79□□□□□ -1.96
SSM4YIL030C RPF1P38805 295 aaKnown RBP2.79□□□□□ -1.96
SSM4YIL030C VHS2P40463 436 aa2.79□□□□□ -1.96
SSM4YIL030C TDA4P47153 279 aa2.79□□□□□ -1.96
SSM4YIL030C HSK3P69852 69 aa2.79□□□□□ -1.96
SSM4YIL030C YPL080CQ02826 108 aa2.79□□□□□ -1.96
SSM4YIL030C SAL1D6W196 494 aa2.78□□□□□ -1.96
SSM4YIL030C DOG2P38773 246 aa2.78□□□□□ -1.96
SSM4YIL030C MIG3P39943 394 aa2.78□□□□□ -1.96
SSM4YIL030C RAF1Q06891 181 aa2.78□□□□□ -1.96
SSM4YIL030C YOR097CQ12274 175 aaPredicted RBP2.78□□□□□ -1.96
SSM4YIL030C RPL23AP0CX41 137 aaKnown RBP2.78□□□□□ -1.96
SSM4YIL030C RPL23BP0CX42 137 aaKnown RBP2.78□□□□□ -1.96
SSM4YIL030C CDC43P18898 376 aa2.78□□□□□ -1.96
SSM4YIL030C MST28P39552 234 aa2.78□□□□□ -1.96
SSM4YIL030C AIM19P40502 157 aa2.78□□□□□ -1.96
SSM4YIL030C YFL051CP43552 160 aa2.78□□□□□ -1.96
SSM4YIL030C YIL002W-AQ3E7Z5 69 aa2.78□□□□□ -1.96
SSM4YIL030C RPL35AP0CX84 120 aaKnown RBP2.78□□□□□ -1.96
SSM4YIL030C RPL35BP0CX85 120 aaKnown RBP2.78□□□□□ -1.96
SSM4YIL030C LSM2P38203 95 aaKnown RBP2.78□□□□□ -1.96
SSM4YIL030C NOP16P40007 231 aaKnown RBP2.78□□□□□ -1.96
SSM4YIL030C CAB4P53332 305 aa2.78□□□□□ -1.96
SSM4YIL030C JID1Q12350 301 aa2.77□□□□□ -1.97
SSM4YIL030C HTL1Q9URQ5 78 aa2.77□□□□□ -1.97
SSM4YIL030C ANB1P19211 157 aa2.77□□□□□ -1.97
SSM4YIL030C TOM7P53507 60 aa2.77□□□□□ -1.97
SSM4YIL030C TIM22Q12328 207 aa2.77□□□□□ -1.97
SSM4YIL030C YDR119W-AQ2V2P9 66 aa2.77□□□□□ -1.97
SSM4YIL030C CUP2P15315 225 aa2.77□□□□□ -1.97
SSM4YIL030C ECO1P43605 281 aa2.77□□□□□ -1.97
SSM4YIL030C ELC1Q03071 99 aa2.77□□□□□ -1.97
SSM4YIL030C RDS3Q06835 107 aaPredicted RBP2.77□□□□□ -1.97
SSM4YIL030C YDR246W-AQ3E763 66 aa2.77□□□□□ -1.97
SSM4YIL030C YMR316C-AI2HB70 103 aa2.76□□□□□ -1.97
SSM4YIL030C YDL186WP48568 277 aa2.76□□□□□ -1.97
SSM4YIL030C LIP2Q06005 328 aa2.76□□□□□ -1.97
SSM4YIL030C ERF2Q06551 359 aa2.76□□□□□ -1.97
SSM4YIL030C NCA3P46955 337 aa2.76□□□□□ -1.97
SSM4YIL030C YIP1P53039 248 aa2.76□□□□□ -1.97
SSM4YIL030C YAL063C-AQ3E791 96 aa2.76□□□□□ -1.97
SSM4YIL030C YFL041W-AQ3E817 63 aa2.76□□□□□ -1.97
SSM4YIL030C RPS16AP0CX51 143 aaKnown RBP2.76□□□□□ -1.97
SSM4YIL030C RPS16BP0CX52 143 aaKnown RBP2.76□□□□□ -1.97
SSM4YIL030C YPT53P36019 220 aa2.76□□□□□ -1.97
SSM4YIL030C MOH1P38191 138 aa2.76□□□□□ -1.97
SSM4YIL030C YJR146WP47174 117 aa2.76□□□□□ -1.97
SSM4YIL030C SIP18P50263 79 aa2.76□□□□□ -1.97
SSM4YIL030C YCR075W-AQ3E830 75 aa2.76□□□□□ -1.97
SSM4YIL030C MED6P38782 295 aa2.75□□□□□ -1.97
SSM4YIL030C YML079WQ03629 201 aa2.75□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 71.5 ms