RNA–Protein interactions for RNA: YHL022C

SPO11, Transcript of Meiosis-specific protein that initiates meiotic recombination, yeast

Gene SPO11, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO11	YHL022C	NMT1	P14743	455 aa		0.12	□□□□□ -2.39
SPO11	YHL022C	FUN14	P18411	198 aa		0.12	□□□□□ -2.39
SPO11	YHL022C	HSP12	P22943	109 aa	Known RBP	0.12	□□□□□ -2.39
SPO11	YHL022C	LSM1	P47017	172 aa	Known RBP	0.12	□□□□□ -2.39
SPO11	YHL022C	COA4	Q05809	96 aa		0.12	□□□□□ -2.39
SPO11	YHL022C	DDP1	Q99321	188 aa	Known RBP	0.12	□□□□□ -2.39
SPO11	YHL022C	PET20	Q99373	253 aa		0.12	□□□□□ -2.39
SPO11	YHL022C	SEC16	P48415	2195 aa	Known RBP	0.11	□□□□□ -2.39
SPO11	YHL022C	FIG1	P38224	298 aa		0.11	□□□□□ -2.39
SPO11	YHL022C	EMC4	P53073	190 aa		0.11	□□□□□ -2.39
SPO11	YHL022C	YCL001W-A	P87012	153 aa		0.11	□□□□□ -2.39
SPO11	YHL022C	NAT5	Q08689	176 aa		0.11	□□□□□ -2.39
SPO11	YHL022C	TAO3	P40468	2376 aa		0.1	□□□□□ -2.39
SPO11	YHL022C	SEC7	P11075	2009 aa	Known RBP	0.1	□□□□□ -2.39
SPO11	YHL022C	RPL40A	P0CH08	128 aa	Known RBP	0.1	□□□□□ -2.39
SPO11	YHL022C	RPL40B	P0CH09	128 aa	Known RBP	0.1	□□□□□ -2.39
SPO11	YHL022C	MRPL44	P19956	98 aa		0.1	□□□□□ -2.39
SPO11	YHL022C	UTP11	P34247	250 aa	Predicted RBP	0.1	□□□□□ -2.39
SPO11	YHL022C	SFT2	P38166	215 aa		0.1	□□□□□ -2.39
SPO11	YHL022C	YBR013C	P38215	129 aa		0.1	□□□□□ -2.39
SPO11	YHL022C	PHB1	P40961	287 aa		0.1	□□□□□ -2.39
SPO11	YHL022C	SPG1	P50088	95 aa		0.1	□□□□□ -2.39
SPO11	YHL022C	BRP1	P53194	125 aa		0.1	□□□□□ -2.39
SPO11	YHL022C	YPL067C	Q02754	198 aa		0.1	□□□□□ -2.39
SPO11	YHL022C	PKR1	Q03880	122 aa	Known RBP	0.1	□□□□□ -2.39
SPO11	YHL022C	TY4B-H	P0C2J7	1802 aa		0.09	□□□□□ -2.39
SPO11	YHL022C	PFY1	P07274	126 aa		0.09	□□□□□ -2.4
SPO11	YHL022C	PET54	P10834	293 aa		0.09	□□□□□ -2.4
SPO11	YHL022C	RME1	P32338	300 aa	Known RBP	0.09	□□□□□ -2.4
SPO11	YHL022C	RPS29B	P41058	56 aa	Known RBP	0.09	□□□□□ -2.4
SPO11	YHL022C	YGR201C	P42936	225 aa		0.09	□□□□□ -2.4
SPO11	YHL022C	LSM8	P47093	109 aa	Known RBP	0.09	□□□□□ -2.4
SPO11	YHL022C	YDR366C	P87287	132 aa		0.09	□□□□□ -2.4
SPO11	YHL022C	YLR296W	Q05898	108 aa		0.09	□□□□□ -2.4
SPO11	YHL022C	YOR385W	Q08909	290 aa		0.09	□□□□□ -2.4
SPO11	YHL022C	SNT2	P53127	1403 aa		0.09	□□□□□ -2.4
SPO11	YHL022C	YSF3	P0C074	85 aa	Predicted RBP	0.08	□□□□□ -2.4
SPO11	YHL022C	MRPL31	P14063	131 aa	Predicted RBP	0.08	□□□□□ -2.4
SPO11	YHL022C	MRPL11	P36521	249 aa	Predicted RBP	0.08	□□□□□ -2.4
SPO11	YHL022C	AIM4	P38305	123 aa	Predicted RBP	0.08	□□□□□ -2.4
SPO11	YHL022C	MIC27	P50945	234 aa		0.08	□□□□□ -2.4
SPO11	YHL022C	YGL149W	P53116	101 aa		0.08	□□□□□ -2.4
SPO11	YHL022C	TLG1	Q03322	224 aa		0.08	□□□□□ -2.4
SPO11	YHL022C	ATP14	Q12349	124 aa		0.08	□□□□□ -2.4
SPO11	YHL022C	HAP3	P13434	144 aa		0.07	□□□□□ -2.4
SPO11	YHL022C	GSP1	P32835	219 aa	Known RBP	0.07	□□□□□ -2.4
SPO11	YHL022C	HHO1	P53551	258 aa		0.07	□□□□□ -2.4
SPO11	YHL022C	SDH7	Q04401	133 aa		0.07	□□□□□ -2.4
SPO11	YHL022C	YLR194C	Q05777	254 aa		0.07	□□□□□ -2.4
SPO11	YHL022C	SPC3	Q12133	184 aa		0.07	□□□□□ -2.4
SPO11	YHL022C	MED11	Q99278	115 aa		0.07	□□□□□ -2.4
SPO11	YHL022C	TRM732	Q03496	1420 aa		0.06	□□□□□ -2.4
SPO11	YHL022C	YPK9	Q12697	1472 aa		0.06	□□□□□ -2.4
SPO11	YHL022C	PAU21	P0CE86	164 aa		0.06	□□□□□ -2.4
SPO11	YHL022C	PAU22	P0CE87	164 aa		0.06	□□□□□ -2.4
SPO11	YHL022C	EMP24	P32803	203 aa	Known RBP	0.06	□□□□□ -2.4
SPO11	YHL022C	ARC19	P33204	171 aa	Known RBP	0.06	□□□□□ -2.4
SPO11	YHL022C	RPS1A	P33442	255 aa	Known RBP	0.06	□□□□□ -2.4
SPO11	YHL022C	QCR10	P37299	77 aa		0.06	□□□□□ -2.4
SPO11	YHL022C	LDB18	Q07887	179 aa		0.06	□□□□□ -2.4
SPO11	YHL022C	GTT2	Q12390	233 aa		0.06	□□□□□ -2.4
SPO11	YHL022C	RTC6	O14464	93 aa		0.05	□□□□□ -2.4
SPO11	YHL022C	PRS3	P38689	320 aa	Known RBP	0.05	□□□□□ -2.4
SPO11	YHL022C	YAP3	P38749	330 aa		0.05	□□□□□ -2.4
SPO11	YHL022C	POR2	P40478	281 aa		0.05	□□□□□ -2.4
SPO11	YHL022C	MOG1	P47123	218 aa		0.05	□□□□□ -2.4
SPO11	YHL022C	YJR128W	P47162	119 aa		0.05	□□□□□ -2.4
SPO11	YHL022C	RBL2	P48606	106 aa	Known RBP	0.05	□□□□□ -2.4
SPO11	YHL022C	YGR039W	P53225	103 aa		0.05	□□□□□ -2.4
SPO11	YHL022C	COF1	Q03048	143 aa	Known RBP	0.05	□□□□□ -2.4
SPO11	YHL022C	RPC19	P28000	142 aa	Known RBP	0.04	□□□□□ -2.4
SPO11	YHL022C	SRX1	P36077	127 aa		0.04	□□□□□ -2.4
SPO11	YHL022C	AIM18	P38884	321 aa		0.04	□□□□□ -2.4
SPO11	YHL022C	HPM1	P40481	377 aa		0.04	□□□□□ -2.4
SPO11	YHL022C	ICS3	P47034	131 aa		0.04	□□□□□ -2.4
SPO11	YHL022C	EFM5	P53200	248 aa	Known RBP	0.04	□□□□□ -2.4
SPO11	YHL022C	ELC1	Q03071	99 aa		0.04	□□□□□ -2.4
SPO11	YHL022C	YMR320W	Q04897	101 aa		0.04	□□□□□ -2.4
SPO11	YHL022C	FCF2	Q12035	217 aa	Predicted RBP	0.04	□□□□□ -2.4
SPO11	YHL022C	RPL14A	P36105	138 aa	Known RBP	0.03	□□□□□ -2.4
SPO11	YHL022C	RPL14B	P38754	138 aa	Known RBP	0.03	□□□□□ -2.4
SPO11	YHL022C	HSP10	P38910	106 aa		0.03	□□□□□ -2.4
SPO11	YHL022C	YAL064W	P39711	94 aa		0.03	□□□□□ -2.4
SPO11	YHL022C	YIL163C	P40448	117 aa		0.03	□□□□□ -2.4
SPO11	YHL022C	YGR017W	P53210	297 aa		0.03	□□□□□ -2.4
SPO11	YHL022C	YDR010C	Q12426	110 aa		0.03	□□□□□ -2.4
SPO11	YHL022C	YGR240C-A	Q3E786	66 aa		0.03	□□□□□ -2.4
SPO11	YHL022C	RPL36B	O14455	100 aa	Known RBP	0.02	□□□□□ -2.41
SPO11	YHL022C	RPL36A	P05745	100 aa	Predicted RBP	0.02	□□□□□ -2.41
SPO11	YHL022C	YCR050C	P25630	102 aa		0.02	□□□□□ -2.41
SPO11	YHL022C	ARL3	Q02804	198 aa		0.02	□□□□□ -2.41
SPO11	YHL022C	SMD2	Q06217	110 aa	Known RBP	0.02	□□□□□ -2.41
SPO11	YHL022C	OCA6	Q12454	224 aa		0.02	□□□□□ -2.41
SPO11	YHL022C	POL2	P21951	2222 aa	Known RBP	0.02	□□□□□ -2.41
SPO11	YHL022C	RIM15	P43565	1770 aa		0.01	□□□□□ -2.41
SPO11	YHL022C	YJL197C-A	P0C5P0	93 aa		0.01	□□□□□ -2.41
SPO11	YHL022C	AUA1	P32450	94 aa		0.01	□□□□□ -2.41
SPO11	YHL022C	YFR035C	P43608	114 aa		0.01	□□□□□ -2.41
SPO11	YHL022C	MPC1	P53157	130 aa	Known RBP	0.01	□□□□□ -2.41
SPO11	YHL022C	YGL041C-B	Q3E750	60 aa		0.01	□□□□□ -2.41

Retrieved 100 of 5,963 RNA–protein pairs in 323 ms