RNA–Protein interactions for RNA: YGR275W

RTT102, Transcript of Component of both the SWI/SNF and RSC chromatin remodeling complexes, yeastyeast

Gene RTT102, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT102YGR275W EMC5P40540 141 aa0.74□□□□□ -2.29
RTT102YGR275W YGL204CP53089 101 aa0.74□□□□□ -2.29
RTT102YGR275W NMA1Q06178 401 aaKnown RBP0.74□□□□□ -2.29
RTT102YGR275W SDO1Q07953 250 aaKnown RBP0.74□□□□□ -2.29
RTT102YGR275W FMP16Q12497 93 aa0.74□□□□□ -2.29
RTT102YGR275W YIL002W-AQ3E7Z5 69 aa0.74□□□□□ -2.29
RTT102YGR275W COX9P07255 59 aa0.73□□□□□ -2.29
RTT102YGR275W RPB3P16370 318 aaKnown RBP0.73□□□□□ -2.29
RTT102YGR275W MSA2P36157 363 aa0.73□□□□□ -2.29
RTT102YGR275W YBL071CP38185 102 aa0.73□□□□□ -2.29
RTT102YGR275W YBR013CP38215 129 aa0.73□□□□□ -2.29
RTT102YGR275W FAR7P43592 221 aa0.73□□□□□ -2.29
RTT102YGR275W YGL034CP53186 121 aa0.73□□□□□ -2.29
RTT102YGR275W YGR042WP53227 271 aa0.73□□□□□ -2.29
RTT102YGR275W UBC7Q02159 165 aa0.73□□□□□ -2.29
RTT102YGR275W HNT1Q04344 158 aaKnown RBP0.73□□□□□ -2.29
RTT102YGR275W HRD1Q08109 551 aa0.73□□□□□ -2.29
RTT102YGR275W YDR029WQ12111 104 aa0.73□□□□□ -2.29
RTT102YGR275W YPR108W-AQ3E7B3 70 aa0.73□□□□□ -2.29
RTT102YGR275W YLR365WQ7LIF2 110 aa0.73□□□□□ -2.29
RTT102YGR275W RPL33AP05744 107 aaKnown RBP0.72□□□□□ -2.29
RTT102YGR275W YKL070WP36087 169 aa0.72□□□□□ -2.29
RTT102YGR275W AIM19P40502 157 aa0.72□□□□□ -2.29
RTT102YGR275W RPL33BP41056 107 aaKnown RBP0.72□□□□□ -2.29
RTT102YGR275W YAE1P47118 141 aaPredicted RBP0.72□□□□□ -2.29
RTT102YGR275W BXI1P48558 297 aa0.72□□□□□ -2.29
RTT102YGR275W YGL149WP53116 101 aa0.72□□□□□ -2.29
RTT102YGR275W YGR050CP53231 118 aa0.72□□□□□ -2.29
RTT102YGR275W PAU12P53343 120 aa0.72□□□□□ -2.29
RTT102YGR275W YMR252CQ04814 134 aa0.72□□□□□ -2.29
RTT102YGR275W YOL160WQ08321 113 aa0.72□□□□□ -2.29
RTT102YGR275W CCW12Q12127 133 aa0.72□□□□□ -2.29
RTT102YGR275W ATG31Q12421 196 aa0.72□□□□□ -2.29
RTT102YGR275W YGL258W-AQ3E740 77 aa0.72□□□□□ -2.29
RTT102YGR275W HUG1Q6Q5K6 68 aa0.72□□□□□ -2.29
RTT102YGR275W YPR010C-AA5Z2X5 72 aa0.71□□□□□ -2.3
RTT102YGR275W YHR213WP0CI67 198 aa0.71□□□□□ -2.3
RTT102YGR275W TRR1P29509 319 aaKnown RBP0.71□□□□□ -2.3
RTT102YGR275W QRI5P32344 111 aa0.71□□□□□ -2.3
RTT102YGR275W ERG24P32462 438 aaKnown RBP0.71□□□□□ -2.3
RTT102YGR275W SFK1P35735 353 aa0.71□□□□□ -2.3
RTT102YGR275W PAU24P38155 120 aa0.71□□□□□ -2.3
RTT102YGR275W RRF1P38771 230 aa0.71□□□□□ -2.3
RTT102YGR275W THO1P40040 218 aaKnown RBP0.71□□□□□ -2.3
RTT102YGR275W RPL13BP40212 199 aaKnown RBP0.71□□□□□ -2.3
RTT102YGR275W PGD1P40356 397 aa0.71□□□□□ -2.3
RTT102YGR275W FMC1P40491 155 aa0.71□□□□□ -2.3
RTT102YGR275W RPS29AP41057 56 aaKnown RBP0.71□□□□□ -2.3
RTT102YGR275W PAM16P42949 149 aa0.71□□□□□ -2.3
RTT102YGR275W IMP2P46972 177 aa0.71□□□□□ -2.3
RTT102YGR275W GPI14P47088 403 aaKnown RBP0.71□□□□□ -2.3
RTT102YGR275W ARP3P47117 449 aaKnown RBP0.71□□□□□ -2.3
RTT102YGR275W DYN2Q02647 92 aa0.71□□□□□ -2.3
RTT102YGR275W RAV2Q03956 351 aa0.71□□□□□ -2.3
RTT102YGR275W THI74Q04083 370 aa0.71□□□□□ -2.3
RTT102YGR275W SDH7Q04401 133 aa0.71□□□□□ -2.3
RTT102YGR275W SPC2Q04969 178 aa0.71□□□□□ -2.3
RTT102YGR275W YMR226CQ05016 267 aaKnown RBP0.71□□□□□ -2.3
RTT102YGR275W YLR042CQ07990 161 aa0.71□□□□□ -2.3
RTT102YGR275W MED4Q12343 284 aa0.71□□□□□ -2.3
RTT102YGR275W RPL13AQ12690 199 aaPredicted RBP0.71□□□□□ -2.3
RTT102YGR275W ADF1Q2V2Q1 113 aa0.71□□□□□ -2.3
RTT102YGR275W IDP1P21954 428 aaKnown RBP0.7□□□□□ -2.3
RTT102YGR275W UBC8P28263 218 aa0.7□□□□□ -2.3
RTT102YGR275W PAU2P32612 120 aa0.7□□□□□ -2.3
RTT102YGR275W RPL14AP36105 138 aaKnown RBP0.7□□□□□ -2.3
RTT102YGR275W RPL14BP38754 138 aaKnown RBP0.7□□□□□ -2.3
RTT102YGR275W RTC3P38804 111 aaPredicted RBP0.7□□□□□ -2.3
RTT102YGR275W YNL217WP40152 326 aa0.7□□□□□ -2.3
RTT102YGR275W OTU1P43558 301 aa0.7□□□□□ -2.3
RTT102YGR275W TMA22P47089 198 aaPredicted RBP0.7□□□□□ -2.3
RTT102YGR275W RPL37BP51402 88 aaKnown RBP0.7□□□□□ -2.3
RTT102YGR275W MGA1P53050 456 aa0.7□□□□□ -2.3
RTT102YGR275W RMR1P53060 241 aa0.7□□□□□ -2.3
RTT102YGR275W SNA2P56508 79 aa0.7□□□□□ -2.3
RTT102YGR275W ERI1P62651 68 aaKnown RBP0.7□□□□□ -2.3
RTT102YGR275W EST3Q03096 181 aa0.7□□□□□ -2.3
RTT102YGR275W TLG1Q03322 224 aa0.7□□□□□ -2.3
RTT102YGR275W UPS3Q04006 179 aa0.7□□□□□ -2.3
RTT102YGR275W YMR253CQ04835 414 aa0.7□□□□□ -2.3
RTT102YGR275W YLR162WQ06235 118 aa0.7□□□□□ -2.3
RTT102YGR275W YPL257WQ08974 193 aa0.7□□□□□ -2.3
RTT102YGR275W YPR145C-AQ2V2P0 78 aa0.7□□□□□ -2.3
RTT102YGR275W KTI11Q3E840 82 aa0.7□□□□□ -2.3
RTT102YGR275W RPL24AP04449 155 aaKnown RBP0.69□□□□□ -2.3
RTT102YGR275W URA5P13298 226 aaKnown RBP0.69□□□□□ -2.3
RTT102YGR275W URA6P15700 204 aa0.69□□□□□ -2.3
RTT102YGR275W UBC4P15731 148 aa0.69□□□□□ -2.3
RTT102YGR275W HOM6P31116 359 aaKnown RBP0.69□□□□□ -2.3
RTT102YGR275W EMP24P32803 203 aaKnown RBP0.69□□□□□ -2.3
RTT102YGR275W RIB7P33312 244 aa0.69□□□□□ -2.3
RTT102YGR275W SHE2P36068 246 aaKnown RBP RIP-Chip data0.69□□□□□ -2.3not detected
RTT102YGR275W MRPL28P36527 147 aa0.69□□□□□ -2.3
RTT102YGR275W CSH1P38287 376 aa0.69□□□□□ -2.3
RTT102YGR275W YER076CP40049 302 aa0.69□□□□□ -2.3
RTT102YGR275W ORM1P53224 222 aa0.69□□□□□ -2.3
RTT102YGR275W TMA23Q03525 211 aa0.69□□□□□ -2.3
RTT102YGR275W YMR320WQ04897 101 aa0.69□□□□□ -2.3
RTT102YGR275W RRT7Q07829 113 aa0.69□□□□□ -2.3
RTT102YGR275W YLR099W-AQ3E798 87 aa0.69□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 225.7 ms