RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W HSP12P22943 109 aaKnown RBP-0.07□□□□□ -2.42
CUL3YGR003W IPI1P38803 334 aaPredicted RBP-0.07□□□□□ -2.42
CUL3YGR003W POR2P40478 281 aa-0.07□□□□□ -2.42
CUL3YGR003W GPI2P46961 280 aa-0.07□□□□□ -2.42
CUL3YGR003W YNL019CP53975 284 aa-0.07□□□□□ -2.42
CUL3YGR003W SMD2Q06217 110 aaKnown RBP-0.07□□□□□ -2.42
CUL3YGR003W YLR053CQ12026 108 aa-0.07□□□□□ -2.42
CUL3YGR003W NSL1Q12143 216 aa-0.07□□□□□ -2.42
CUL3YGR003W AIM18P38884 321 aa-0.07□□□□□ -2.42
CUL3YGR003W YAL064WP39711 94 aa-0.07□□□□□ -2.42
CUL3YGR003W LCL1Q02786 101 aa-0.07□□□□□ -2.42
CUL3YGR003W YLR194CQ05777 254 aa-0.07□□□□□ -2.42
CUL3YGR003W GTT2Q12390 233 aa-0.07□□□□□ -2.42
CUL3YGR003W SNT2P53127 1403 aa-0.08□□□□□ -2.42
CUL3YGR003W YRF1-3P0CX14 1859 aa-0.08□□□□□ -2.42
CUL3YGR003W YRF1-7P0CX15 1859 aa-0.08□□□□□ -2.42
CUL3YGR003W VMA10P48836 114 aaKnown RBP-0.08□□□□□ -2.42
CUL3YGR003W YOL164W-AQ3E7A5 60 aa-0.08□□□□□ -2.42
CUL3YGR003W SFT2P38166 215 aa-0.09□□□□□ -2.42
CUL3YGR003W COF1Q03048 143 aaKnown RBP-0.09□□□□□ -2.42
CUL3YGR003W RPA12P32529 125 aaKnown RBP-0.09□□□□□ -2.42
CUL3YGR003W RPL14AP36105 138 aaKnown RBP-0.09□□□□□ -2.42
CUL3YGR003W RPL14BP38754 138 aaKnown RBP-0.09□□□□□ -2.42
CUL3YGR003W YPD1Q07688 167 aa-0.09□□□□□ -2.42
CUL3YGR003W KTI11Q3E840 82 aa-0.09□□□□□ -2.42
CUL3YGR003W DER1P38307 211 aa-0.1□□□□□ -2.43
CUL3YGR003W YIL163CP40448 117 aa-0.1□□□□□ -2.43
CUL3YGR003W YJL009WP47078 108 aa-0.1□□□□□ -2.43
CUL3YGR003W YLR296WQ05898 108 aa-0.1□□□□□ -2.43
CUL3YGR003W RRT7Q07829 113 aa-0.1□□□□□ -2.43
CUL3YGR003W HUT1Q12520 339 aa-0.1□□□□□ -2.43
CUL3YGR003W URB1P34241 1764 aaKnown RBP-0.1□□□□□ -2.43
CUL3YGR003W MRPL11P36521 249 aaPredicted RBP-0.1□□□□□ -2.43
CUL3YGR003W YJR128WP47162 119 aa-0.1□□□□□ -2.43
CUL3YGR003W BRP1P53194 125 aa-0.1□□□□□ -2.43
CUL3YGR003W YIL014C-AQ02598 104 aa-0.1□□□□□ -2.43
CUL3YGR003W IRC21Q04772 201 aa-0.1□□□□□ -2.43
CUL3YGR003W FCF2Q12035 217 aaPredicted RBP-0.1□□□□□ -2.43
CUL3YGR003W YOR376W-AQ3E805 51 aa-0.1□□□□□ -2.43
CUL3YGR003W ENV10Q99382 181 aa-0.1□□□□□ -2.43
CUL3YGR003W YCR050CP25630 102 aa-0.11□□□□□ -2.43
CUL3YGR003W SRX1P36077 127 aa-0.11□□□□□ -2.43
CUL3YGR003W HPM1P40481 377 aa-0.11□□□□□ -2.43
CUL3YGR003W LSM1P47017 172 aaKnown RBP-0.11□□□□□ -2.43
CUL3YGR003W HHO1P53551 258 aa-0.11□□□□□ -2.43
CUL3YGR003W ATP19P81451 68 aa-0.11□□□□□ -2.43
CUL3YGR003W YDR476CQ03362 224 aa-0.11□□□□□ -2.43
CUL3YGR003W NAT5Q08689 176 aa-0.11□□□□□ -2.43
CUL3YGR003W CMC2Q3E7A4 109 aa-0.11□□□□□ -2.43
CUL3YGR003W DDP1Q99321 188 aaKnown RBP-0.11□□□□□ -2.43
CUL3YGR003W PET20Q99373 253 aa-0.11□□□□□ -2.43
CUL3YGR003W UTP20P35194 2493 aaKnown RBP-0.11□□□□□ -2.43
CUL3YGR003W ARL3Q02804 198 aa-0.11□□□□□ -2.43
CUL3YGR003W TVP18Q04767 167 aa-0.11□□□□□ -2.43
CUL3YGR003W COA6Q3E846 104 aa-0.11□□□□□ -2.43
CUL3YGR003W QCR2P07257 368 aa-0.12□□□□□ -2.43
CUL3YGR003W EMP24P32803 203 aaKnown RBP-0.12□□□□□ -2.43
CUL3YGR003W QCR10P37299 77 aa-0.12□□□□□ -2.43
CUL3YGR003W EFM5P53200 248 aaKnown RBP-0.12□□□□□ -2.43
CUL3YGR003W LDB18Q07887 179 aa-0.12□□□□□ -2.43
CUL3YGR003W SAC3P46674 1301 aa-0.12□□□□□ -2.43
CUL3YGR003W MRPL31P14063 131 aaPredicted RBP-0.13□□□□□ -2.43
CUL3YGR003W HYM1P32464 399 aa-0.13□□□□□ -2.43
CUL3YGR003W YEA6P39953 335 aa-0.13□□□□□ -2.43
CUL3YGR003W RPS29BP41058 56 aaKnown RBP-0.13□□□□□ -2.43
CUL3YGR003W MOG1P47123 218 aa-0.13□□□□□ -2.43
CUL3YGR003W YGR017WP53210 297 aa-0.13□□□□□ -2.43
CUL3YGR003W YLR285C-AQ3E771 56 aa-0.13□□□□□ -2.43
CUL3YGR003W PAU21P0CE86 164 aa-0.13□□□□□ -2.43
CUL3YGR003W PAU22P0CE87 164 aa-0.13□□□□□ -2.43
CUL3YGR003W HAP3P13434 144 aa-0.13□□□□□ -2.43
CUL3YGR003W ANB1P19211 157 aa-0.13□□□□□ -2.43
CUL3YGR003W RPC19P28000 142 aaKnown RBP-0.13□□□□□ -2.43
CUL3YGR003W SUI1P32911 108 aaKnown RBP-0.13□□□□□ -2.43
CUL3YGR003W VPS51P36116 164 aa-0.13□□□□□ -2.43
CUL3YGR003W SRL3P36167 246 aa-0.13□□□□□ -2.43
CUL3YGR003W LSM8P47093 109 aaKnown RBP-0.13□□□□□ -2.43
CUL3YGR003W PAU12P53343 120 aa-0.13□□□□□ -2.43
CUL3YGR003W MRPS12P53732 153 aa-0.13□□□□□ -2.43
CUL3YGR003W MAK3Q03503 176 aa-0.13□□□□□ -2.43
CUL3YGR003W FMP27Q06179 2628 aa-0.14□□□□□ -2.43
CUL3YGR003W RPS28BP0C0X0 67 aaKnown RBP-0.14□□□□□ -2.43
CUL3YGR003W PET54P10834 293 aa-0.14□□□□□ -2.43
CUL3YGR003W PRS3P38689 320 aaKnown RBP-0.14□□□□□ -2.43
CUL3YGR003W HPA2Q06592 156 aa-0.14□□□□□ -2.43
CUL3YGR003W RPS28AQ3E7X9 67 aaPredicted RBP-0.14□□□□□ -2.43
CUL3YGR003W YLR255CO13574 117 aa-0.14□□□□□ -2.43
CUL3YGR003W PBI2P0CT04 75 aaKnown RBP-0.14□□□□□ -2.43
CUL3YGR003W HSP10P38910 106 aa-0.14□□□□□ -2.43
CUL3YGR003W CYB5P40312 120 aa-0.14□□□□□ -2.43
CUL3YGR003W SEN1Q00416 2231 aaKnown RBP-0.14□□□□□ -2.43
CUL3YGR003W TY4B-HP0C2J7 1802 aa-0.15□□□□□ -2.43
CUL3YGR003W GSP1P32835 219 aaKnown RBP-0.15□□□□□ -2.43
CUL3YGR003W PKR1Q03880 122 aaKnown RBP-0.15□□□□□ -2.43
CUL3YGR003W RAF1Q06891 181 aa-0.15□□□□□ -2.43
CUL3YGR003W YGR240C-AQ3E786 66 aa-0.15□□□□□ -2.43
CUL3YGR003W YKL044WP36092 106 aa-0.15□□□□□ -2.43
CUL3YGR003W YAP3P38749 330 aa-0.15□□□□□ -2.43
CUL3YGR003W YHR130CP38834 111 aa-0.15□□□□□ -2.43
CUL3YGR003W ELC1Q03071 99 aa-0.15□□□□□ -2.43
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms