RNA–Protein interactions for RNA: YGL021W

ALK1, Transcript of Protein kinase, yeast

Gene ALK1, Length 2,283 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ALK1	YGL021W	YKR070W	P36151	352 aa	Known RBP	0.87	□□□□□ -2.27
ALK1	YGL021W	GPI19	Q04082	140 aa		0.87	□□□□□ -2.27
ALK1	YGL021W	YOR097C	Q12274	175 aa	Predicted RBP	0.87	□□□□□ -2.27
ALK1	YGL021W	YLR422W	Q06409	1932 aa		0.87	□□□□□ -2.27
ALK1	YGL021W	HSL1	P34244	1518 aa		0.87	□□□□□ -2.27
ALK1	YGL021W	COX5B	P00425	151 aa		0.87	□□□□□ -2.27
ALK1	YGL021W	PAU21	P0CE86	164 aa		0.87	□□□□□ -2.27
ALK1	YGL021W	PAU22	P0CE87	164 aa		0.87	□□□□□ -2.27
ALK1	YGL021W	FPR1	P20081	114 aa	Known RBP	0.87	□□□□□ -2.27
ALK1	YGL021W	UGX2	P32772	223 aa		0.87	□□□□□ -2.27
ALK1	YGL021W	IPT1	P38954	527 aa		0.87	□□□□□ -2.27
ALK1	YGL021W	YAL064W	P39711	94 aa		0.87	□□□□□ -2.27
ALK1	YGL021W	ERV14	P53173	138 aa		0.87	□□□□□ -2.27
ALK1	YGL021W	YGR164W	P53291	111 aa		0.87	□□□□□ -2.27
ALK1	YGL021W	RUB1	Q03919	77 aa		0.87	□□□□□ -2.27
ALK1	YGL021W	FAS1	P07149	2051 aa	Known RBP	0.87	□□□□□ -2.27
ALK1	YGL021W	SEC59	P20048	519 aa		0.86	□□□□□ -2.27
ALK1	YGL021W	HSP150	P32478	413 aa		0.86	□□□□□ -2.27
ALK1	YGL021W	GSP1	P32835	219 aa	Known RBP	0.86	□□□□□ -2.27
ALK1	YGL021W	DCV1	P43595	202 aa		0.86	□□□□□ -2.27
ALK1	YGL021W	RPS12	P48589	143 aa	Known RBP	0.86	□□□□□ -2.27
ALK1	YGL021W	YGL230C	P53074	147 aa		0.86	□□□□□ -2.27
ALK1	YGL021W	BRP1	P53194	125 aa		0.86	□□□□□ -2.27
ALK1	YGL021W	SWC7	Q06707	132 aa		0.86	□□□□□ -2.27
ALK1	YGL021W	DUR1,2	P32528	1835 aa	Known RBP	0.86	□□□□□ -2.27
ALK1	YGL021W	RPL36B	O14455	100 aa	Known RBP	0.86	□□□□□ -2.27
ALK1	YGL021W	RPL36A	P05745	100 aa	Predicted RBP	0.86	□□□□□ -2.27
ALK1	YGL021W	FUN14	P18411	198 aa		0.86	□□□□□ -2.27
ALK1	YGL021W	MRPL11	P36521	249 aa	Predicted RBP	0.86	□□□□□ -2.27
ALK1	YGL021W	BAT2	P47176	376 aa	Known RBP	0.86	□□□□□ -2.27
ALK1	YGL021W	SNT2	P53127	1403 aa		0.86	□□□□□ -2.27
ALK1	YGL021W	YPL067C	Q02754	198 aa		0.86	□□□□□ -2.27
ALK1	YGL021W	IRC21	Q04772	201 aa		0.86	□□□□□ -2.27
ALK1	YGL021W	YMR252C	Q04814	134 aa		0.86	□□□□□ -2.27
ALK1	YGL021W	FYV7	Q12247	151 aa		0.86	□□□□□ -2.27
ALK1	YGL021W	GTT2	Q12390	233 aa		0.86	□□□□□ -2.27
ALK1	YGL021W	MHF1	Q3E835	90 aa		0.86	□□□□□ -2.27
ALK1	YGL021W	UBR1	P19812	1950 aa		0.85	□□□□□ -2.27
ALK1	YGL021W	YBR242W	P38331	238 aa		0.85	□□□□□ -2.27
ALK1	YGL021W	YGL149W	P53116	101 aa		0.85	□□□□□ -2.27
ALK1	YGL021W	SED1	Q01589	338 aa		0.85	□□□□□ -2.27
ALK1	YGL021W	FIT1	Q04433	528 aa		0.85	□□□□□ -2.27
ALK1	YGL021W	AVO2	Q04749	426 aa		0.85	□□□□□ -2.27
ALK1	YGL021W	TSC11	P40061	1430 aa		0.85	□□□□□ -2.27
ALK1	YGL021W	YKL044W	P36092	106 aa		0.85	□□□□□ -2.27
ALK1	YGL021W	MRPL15	P36523	253 aa		0.85	□□□□□ -2.27
ALK1	YGL021W	YBR027C	P38220	110 aa		0.85	□□□□□ -2.27
ALK1	YGL021W	YER137C	P40083	148 aa	Known RBP	0.85	□□□□□ -2.27
ALK1	YGL021W	GTT1	P40582	234 aa		0.85	□□□□□ -2.27
ALK1	YGL021W	PAM16	P42949	149 aa		0.85	□□□□□ -2.27
ALK1	YGL021W	RPL33A	P05744	107 aa	Known RBP	0.84	□□□□□ -2.27
ALK1	YGL021W	YHR213W	P0CI67	198 aa		0.84	□□□□□ -2.27
ALK1	YGL021W	UTP11	P34247	250 aa	Predicted RBP	0.84	□□□□□ -2.27
ALK1	YGL021W	YBR090C	P38253	122 aa		0.84	□□□□□ -2.27
ALK1	YGL021W	TDA2	P40045	126 aa		0.84	□□□□□ -2.27
ALK1	YGL021W	VMA21	P41806	77 aa		0.84	□□□□□ -2.27
ALK1	YGL021W	GNA1	P43577	159 aa	Predicted RBP	0.84	□□□□□ -2.27
ALK1	YGL021W	YLR296W	Q05898	108 aa		0.84	□□□□□ -2.27
ALK1	YGL021W	YLR042C	Q07990	161 aa		0.84	□□□□□ -2.27
ALK1	YGL021W	YPL225W	Q08971	146 aa	Known RBP	0.84	□□□□□ -2.27
ALK1	YGL021W	CMC4	Q3E7A9	73 aa		0.84	□□□□□ -2.27
ALK1	YGL021W	COA3	Q3E7B2	85 aa		0.84	□□□□□ -2.27
ALK1	YGL021W	TAR1	Q8TGM6	124 aa		0.84	□□□□□ -2.27
ALK1	YGL021W	MED11	Q99278	115 aa		0.84	□□□□□ -2.27
ALK1	YGL021W	YER039C-A	P0CD97	72 aa		0.84	□□□□□ -2.28
ALK1	YGL021W	LHP1	P33399	275 aa	Known RBP	0.84	□□□□□ -2.28
ALK1	YGL021W	SNF11	P38956	169 aa		0.84	□□□□□ -2.28
ALK1	YGL021W	YFL065C	P43539	102 aa		0.84	□□□□□ -2.28
ALK1	YGL021W	YJL009W	P47078	108 aa		0.84	□□□□□ -2.28
ALK1	YGL021W	YIL014C-A	Q02598	104 aa		0.84	□□□□□ -2.28
ALK1	YGL021W	YCL042W	P25572	119 aa		0.83	□□□□□ -2.28
ALK1	YGL021W	AIM18	P38884	321 aa		0.83	□□□□□ -2.28
ALK1	YGL021W	YEL008W	P40001	126 aa		0.83	□□□□□ -2.28
ALK1	YGL021W	YFL051C	P43552	160 aa		0.83	□□□□□ -2.28
ALK1	YGL021W	YFR035C	P43608	114 aa		0.83	□□□□□ -2.28
ALK1	YGL021W	HPA2	Q06592	156 aa		0.83	□□□□□ -2.28
ALK1	YGL021W	YOR072W	Q08486	104 aa		0.83	□□□□□ -2.28
ALK1	YGL021W	YLR365W	Q7LIF2	110 aa		0.83	□□□□□ -2.28
ALK1	YGL021W	TRM732	Q03496	1420 aa		0.83	□□□□□ -2.28
ALK1	YGL021W	RTC6	O14464	93 aa		0.82	□□□□□ -2.28
ALK1	YGL021W	TRS20	P38334	175 aa		0.82	□□□□□ -2.28
ALK1	YGL021W	LST8	P41318	303 aa		0.82	□□□□□ -2.28
ALK1	YGL021W	YMR007W	Q03675	126 aa		0.82	□□□□□ -2.28
ALK1	YGL021W	YMR090W	Q04304	227 aa	Known RBP	0.82	□□□□□ -2.28
ALK1	YGL021W	ZEO1	Q08245	113 aa		0.82	□□□□□ -2.28
ALK1	YGL021W	YOR289W	Q12012	251 aa	Predicted RBP	0.82	□□□□□ -2.28
ALK1	YGL021W	DAD1	Q12248	94 aa		0.82	□□□□□ -2.28
ALK1	YGL021W	YGL014C-A	P0C5N1	53 aa		0.82	□□□□□ -2.28
ALK1	YGL021W	YJL197C-A	P0C5P0	93 aa		0.82	□□□□□ -2.28
ALK1	YGL021W	YAR029W	P39549	74 aa		0.82	□□□□□ -2.28
ALK1	YGL021W	YMR122C	Q03879	124 aa		0.82	□□□□□ -2.28
ALK1	YGL021W	YPL261C	Q08976	102 aa		0.82	□□□□□ -2.28
ALK1	YGL021W	OST5	Q92316	86 aa		0.82	□□□□□ -2.28
ALK1	YGL021W	TOP2	P06786	1428 aa	Known RBP	0.82	□□□□□ -2.28
ALK1	YGL021W	BUD4	P47136	1447 aa		0.82	□□□□□ -2.28
ALK1	YGL021W	VAR1	P02381	398 aa		0.81	□□□□□ -2.28
ALK1	YGL021W	ADK1	P07170	222 aa	Known RBP	0.81	□□□□□ -2.28
ALK1	YGL021W	UBC5	P15732	148 aa		0.81	□□□□□ -2.28
ALK1	YGL021W	ATG8	P38182	117 aa	RIP-Chip data	0.81	□□□□□ -2.28	not detected
ALK1	YGL021W	YAR064W	P39563	99 aa		0.81	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 105.8 ms