RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W RAF1Q06891 181 aa0.34□□□□□ -2.36
LOC1YFR001W DDP1Q99321 188 aaKnown RBP0.34□□□□□ -2.36
LOC1YFR001W PET20Q99373 253 aa0.34□□□□□ -2.36
LOC1YFR001W SFT2P38166 215 aa0.33□□□□□ -2.36
LOC1YFR001W YBR013CP38215 129 aa0.33□□□□□ -2.36
LOC1YFR001W AIM4P38305 123 aaPredicted RBP0.33□□□□□ -2.36
LOC1YFR001W MIC27P50945 234 aa0.33□□□□□ -2.36
LOC1YFR001W YOR385WQ08909 290 aa0.33□□□□□ -2.36
LOC1YFR001W LSM1P47017 172 aaKnown RBP0.32□□□□□ -2.36
LOC1YFR001W PKR1Q03880 122 aaKnown RBP0.32□□□□□ -2.36
LOC1YFR001W LSM8P47093 109 aaKnown RBP0.31□□□□□ -2.36
LOC1YFR001W TY4B-JP47024 1803 aa0.3□□□□□ -2.36
LOC1YFR001W BLM10P43583 2143 aa0.3□□□□□ -2.36
LOC1YFR001W TLG1Q03322 224 aa0.3□□□□□ -2.36
LOC1YFR001W YMR320WQ04897 101 aa0.3□□□□□ -2.36
LOC1YFR001W PFY1P07274 126 aa0.29□□□□□ -2.36
LOC1YFR001W SUI1P32911 108 aaKnown RBP0.29□□□□□ -2.36
LOC1YFR001W RPS1AP33442 255 aaKnown RBP0.29□□□□□ -2.36
LOC1YFR001W YGL149WP53116 101 aa0.29□□□□□ -2.36
LOC1YFR001W BRP1P53194 125 aa0.29□□□□□ -2.36
LOC1YFR001W YSF3P0C074 85 aaPredicted RBP0.28□□□□□ -2.36
LOC1YFR001W PET54P10834 293 aa0.28□□□□□ -2.36
LOC1YFR001W MOG1P47123 218 aa0.28□□□□□ -2.36
LOC1YFR001W BNI1P41832 1953 aa0.27□□□□□ -2.37
LOC1YFR001W MRPL44P19956 98 aa0.27□□□□□ -2.37
LOC1YFR001W SPG1P50088 95 aa0.27□□□□□ -2.37
LOC1YFR001W YDR366CP87287 132 aa0.27□□□□□ -2.37
LOC1YFR001W MRPL11P36521 249 aaPredicted RBP0.26□□□□□ -2.37
LOC1YFR001W YLR296WQ05898 108 aa0.26□□□□□ -2.37
LOC1YFR001W SNF2P22082 1703 aa0.25□□□□□ -2.37
LOC1YFR001W RTC6O14464 93 aa0.25□□□□□ -2.37
LOC1YFR001W QCR10P37299 77 aa0.25□□□□□ -2.37
LOC1YFR001W SMD2Q06217 110 aaKnown RBP0.25□□□□□ -2.37
LOC1YFR001W GTT2Q12390 233 aa0.25□□□□□ -2.37
LOC1YFR001W YLR194CQ05777 254 aa0.24□□□□□ -2.37
LOC1YFR001W YOR1P53049 1477 aa0.23□□□□□ -2.37
LOC1YFR001W YRF1-3P0CX14 1859 aa0.23□□□□□ -2.37
LOC1YFR001W YRF1-7P0CX15 1859 aa0.23□□□□□ -2.37
LOC1YFR001W MRPL31P14063 131 aaPredicted RBP0.23□□□□□ -2.37
LOC1YFR001W POR2P40478 281 aa0.23□□□□□ -2.37
LOC1YFR001W MED11Q99278 115 aa0.23□□□□□ -2.37
LOC1YFR001W SNT2P53127 1403 aa0.22□□□□□ -2.37
LOC1YFR001W HAP3P13434 144 aa0.22□□□□□ -2.37
LOC1YFR001W AIM18P38884 321 aa0.22□□□□□ -2.37
LOC1YFR001W COF1Q03048 143 aaKnown RBP0.22□□□□□ -2.37
LOC1YFR001W LDB18Q07887 179 aa0.22□□□□□ -2.37
LOC1YFR001W ATP14Q12349 124 aa0.21□□□□□ -2.38
LOC1YFR001W YGR039WP53225 103 aa0.2□□□□□ -2.38
LOC1YFR001W SPC3Q12133 184 aa0.2□□□□□ -2.38
LOC1YFR001W YCR050CP25630 102 aa0.19□□□□□ -2.38
LOC1YFR001W HSP10P38910 106 aa0.19□□□□□ -2.38
LOC1YFR001W YAL064WP39711 94 aa0.19□□□□□ -2.38
LOC1YFR001W RPS29BP41058 56 aaKnown RBP0.19□□□□□ -2.38
LOC1YFR001W YJR128WP47162 119 aa0.19□□□□□ -2.38
LOC1YFR001W RBL2P48606 106 aaKnown RBP0.19□□□□□ -2.38
LOC1YFR001W HHO1P53551 258 aa0.19□□□□□ -2.38
LOC1YFR001W SDH7Q04401 133 aa0.19□□□□□ -2.38
LOC1YFR001W GSP1P32835 219 aaKnown RBP0.18□□□□□ -2.38
LOC1YFR001W HPM1P40481 377 aa0.18□□□□□ -2.38
LOC1YFR001W FCF2Q12035 217 aaPredicted RBP0.18□□□□□ -2.38
LOC1YFR001W TY1B-HO13535 1793 aa0.18□□□□□ -2.38
LOC1YFR001W PAU21P0CE86 164 aa0.17□□□□□ -2.38
LOC1YFR001W PAU22P0CE87 164 aa0.17□□□□□ -2.38
LOC1YFR001W SRX1P36077 127 aa0.17□□□□□ -2.38
LOC1YFR001W PRS3P38689 320 aaKnown RBP0.17□□□□□ -2.38
LOC1YFR001W EFM5P53200 248 aaKnown RBP0.17□□□□□ -2.38
LOC1YFR001W EMP24P32803 203 aaKnown RBP0.16□□□□□ -2.38
LOC1YFR001W ARC19P33204 171 aaKnown RBP0.16□□□□□ -2.38
LOC1YFR001W RPC19P28000 142 aaKnown RBP0.15□□□□□ -2.39
LOC1YFR001W YIL163CP40448 117 aa0.15□□□□□ -2.39
LOC1YFR001W SUA7P29055 345 aaPredicted RBP0.14□□□□□ -2.39
LOC1YFR001W AUA1P32450 94 aa0.14□□□□□ -2.39
LOC1YFR001W RPL14AP36105 138 aaKnown RBP0.14□□□□□ -2.39
LOC1YFR001W RPL14BP38754 138 aaKnown RBP0.14□□□□□ -2.39
LOC1YFR001W FAS2P19097 1887 aaKnown RBP0.14□□□□□ -2.39
LOC1YFR001W RPL36BO14455 100 aaKnown RBP0.13□□□□□ -2.39
LOC1YFR001W RPL36AP05745 100 aaPredicted RBP0.13□□□□□ -2.39
LOC1YFR001W YFR035CP43608 114 aa0.13□□□□□ -2.39
LOC1YFR001W YGR017WP53210 297 aa0.13□□□□□ -2.39
LOC1YFR001W ELC1Q03071 99 aa0.13□□□□□ -2.39
LOC1YFR001W BRR2P32639 2163 aaKnown RBP0.11□□□□□ -2.39
LOC1YFR001W TVP18Q04767 167 aa0.11□□□□□ -2.39
LOC1YFR001W SEC16P48415 2195 aaKnown RBP0.11□□□□□ -2.39
LOC1YFR001W ARL3Q02804 198 aa0.1□□□□□ -2.39
LOC1YFR001W ENV10Q99382 181 aa0.1□□□□□ -2.39
LOC1YFR001W MYO1P08964 1928 aa0.1□□□□□ -2.39
LOC1YFR001W TRS20P38334 175 aa0.09□□□□□ -2.4
LOC1YFR001W YAP3P38749 330 aa0.09□□□□□ -2.4
LOC1YFR001W LCL1Q02786 101 aa0.08□□□□□ -2.4
LOC1YFR001W HPA2Q06592 156 aa0.08□□□□□ -2.4
LOC1YFR001W PHS1P40857 217 aa0.07□□□□□ -2.4
LOC1YFR001W OCA6Q12454 224 aa0.07□□□□□ -2.4
LOC1YFR001W ICS3P47034 131 aa0.06□□□□□ -2.4
LOC1YFR001W YGR240C-AQ3E786 66 aa0.06□□□□□ -2.4
LOC1YFR001W YEA6P39953 335 aa0.05□□□□□ -2.4
LOC1YFR001W RPL22AP05749 121 aaKnown RBP0.04□□□□□ -2.4
LOC1YFR001W MPC1P53157 130 aaKnown RBP0.04□□□□□ -2.4
LOC1YFR001W ERV14P53173 138 aa0.04□□□□□ -2.4
LOC1YFR001W YDR010CQ12426 110 aa0.04□□□□□ -2.4
LOC1YFR001W CSN9Q03981 162 aa0.03□□□□□ -2.4
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms