RNA–Protein interactions for RNA: YFL047W

RGD2, Transcript of GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p, yeastyeast

Gene RGD2, Length 2,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD2YFL047W SPC29P33419 253 aa5.37□□□□□ -1.55
RGD2YFL047W RRT1P38192 103 aa5.37□□□□□ -1.55
RGD2YFL047W MBB1P39534 108 aa5.37□□□□□ -1.55
RGD2YFL047W PAU7P39545 55 aa5.37□□□□□ -1.55
RGD2YFL047W YJL027CP47063 138 aaPredicted RBP5.37□□□□□ -1.55
RGD2YFL047W DPP1Q05521 289 aa5.37□□□□□ -1.55
RGD2YFL047W YPL278CQ08990 100 aa5.37□□□□□ -1.55
RGD2YFL047W JID1Q12350 301 aa5.37□□□□□ -1.55
RGD2YFL047W YFL068WP0CX99 160 aa5.36□□□□□ -1.55
RGD2YFL047W YLL066W-AP0CY00 160 aa5.36□□□□□ -1.55
RGD2YFL047W YLL067W-AP0CY01 160 aa5.36□□□□□ -1.55
RGD2YFL047W YPI1P43587 155 aa5.36□□□□□ -1.55
RGD2YFL047W YGR045CP53229 120 aa5.36□□□□□ -1.55
RGD2YFL047W DAD1Q12248 94 aa5.36□□□□□ -1.55
RGD2YFL047W FEN2P25621 512 aaKnown RBP5.36□□□□□ -1.55
RGD2YFL047W PRS4P38063 326 aaPredicted RBP5.36□□□□□ -1.55
RGD2YFL047W GPI18P38211 433 aa5.36□□□□□ -1.55
RGD2YFL047W FYV4P38783 130 aaPredicted RBP5.36□□□□□ -1.55
RGD2YFL047W PET8P38921 284 aa5.36□□□□□ -1.55
RGD2YFL047W SNU13P39990 126 aaKnown RBP5.36□□□□□ -1.55
RGD2YFL047W WWM1P43582 211 aaKnown RBP5.36□□□□□ -1.55
RGD2YFL047W YIP1P53039 248 aa5.36□□□□□ -1.55
RGD2YFL047W THG1P53215 237 aaKnown RBP5.36□□□□□ -1.55
RGD2YFL047W GRH1Q04410 372 aaKnown RBP5.36□□□□□ -1.55
RGD2YFL047W IRC25Q07951 179 aa5.36□□□□□ -1.55
RGD2YFL047W YPR170W-BP0C5R9 85 aa5.35□□□□□ -1.55
RGD2YFL047W CWC27Q02770 301 aa5.35□□□□□ -1.55
RGD2YFL047W YIL014C-AQ02598 104 aa5.35□□□□□ -1.55
RGD2YFL047W YBR056W-AI2HB52 66 aa5.34□□□□□ -1.55
RGD2YFL047W CUP1-1P0CX80 61 aa5.34□□□□□ -1.55
RGD2YFL047W CUP1-2P0CX81 61 aa5.34□□□□□ -1.55
RGD2YFL047W MRPL38P35996 138 aaPredicted RBP5.34□□□□□ -1.55
RGD2YFL047W YKR032WP36127 104 aa5.34□□□□□ -1.55
RGD2YFL047W VPS71Q03433 280 aa5.34□□□□□ -1.55
RGD2YFL047W SPS100P13130 326 aa5.33□□□□□ -1.56
RGD2YFL047W YGR017WP53210 297 aa5.33□□□□□ -1.56
RGD2YFL047W YDR366CP87287 132 aa5.33□□□□□ -1.56
RGD2YFL047W BET5Q03630 159 aa5.33□□□□□ -1.56
RGD2YFL047W UPS3Q04006 179 aa5.33□□□□□ -1.56
RGD2YFL047W PBP4Q07362 185 aaKnown RBP5.33□□□□□ -1.56
RGD2YFL047W YLR050CQ12155 161 aaKnown RBP5.33□□□□□ -1.56
RGD2YFL047W YKR070WP36151 352 aaKnown RBP5.33□□□□□ -1.56
RGD2YFL047W GPP2P40106 250 aaKnown RBP5.33□□□□□ -1.56
RGD2YFL047W SUT1P53032 299 aaKnown RBP5.33□□□□□ -1.56
RGD2YFL047W GTO3Q04806 366 aa5.33□□□□□ -1.56
RGD2YFL047W ADH6Q04894 360 aaKnown RBP5.33□□□□□ -1.56
RGD2YFL047W TRA1P38811 3744 aa5.32□□□□□ -1.56
RGD2YFL047W RPL12AP0CX53 165 aaKnown RBP5.32□□□□□ -1.56
RGD2YFL047W RPL12BP0CX54 165 aa5.32□□□□□ -1.56
RGD2YFL047W ERS1P17261 260 aa5.32□□□□□ -1.56
RGD2YFL047W MRPL20P22354 195 aaPredicted RBP5.32□□□□□ -1.56
RGD2YFL047W RPL15BP54780 204 aaPredicted RBP5.32□□□□□ -1.56
RGD2YFL047W YLR342W-AQ3E810 57 aa5.32□□□□□ -1.56
RGD2YFL047W MBF1O14467 151 aaKnown RBP5.32□□□□□ -1.56
RGD2YFL047W YJR096WP47137 282 aa5.32□□□□□ -1.56
RGD2YFL047W YCR023CP25351 611 aa5.31□□□□□ -1.56
RGD2YFL047W SUR7P54003 302 aa5.31□□□□□ -1.56
RGD2YFL047W YDR042CQ03205 200 aa5.31□□□□□ -1.56
RGD2YFL047W YOL160WQ08321 113 aa5.31□□□□□ -1.56
RGD2YFL047W HTL1Q9URQ5 78 aa5.31□□□□□ -1.56
RGD2YFL047W RPL27AP0C2H6 136 aaKnown RBP5.3□□□□□ -1.56
RGD2YFL047W IZH3Q07959 543 aa5.3□□□□□ -1.56
RGD2YFL047W RPF1P38805 295 aaKnown RBP5.3□□□□□ -1.56
RGD2YFL047W MIC26P50087 233 aa5.3□□□□□ -1.56
RGD2YFL047W SBH2P52871 88 aa5.3□□□□□ -1.56
RGD2YFL047W MOT3P54785 490 aaKnown RBP5.3□□□□□ -1.56
RGD2YFL047W GPI19Q04082 140 aa5.3□□□□□ -1.56
RGD2YFL047W PRE1P22141 198 aaKnown RBP5.29□□□□□ -1.56
RGD2YFL047W YIL012WP40551 113 aa5.29□□□□□ -1.56
RGD2YFL047W NCA3P46955 337 aa5.29□□□□□ -1.56
RGD2YFL047W LCB3P47013 409 aa5.29□□□□□ -1.56
RGD2YFL047W YGR025WP53216 100 aa5.29□□□□□ -1.56
RGD2YFL047W UBC7Q02159 165 aa5.29□□□□□ -1.56
RGD2YFL047W UTP23Q12339 254 aaKnown RBP5.29□□□□□ -1.56
RGD2YFL047W MRP49P32388 137 aa5.29□□□□□ -1.56
RGD2YFL047W MST27P53176 234 aa5.29□□□□□ -1.56
RGD2YFL047W YML122CQ03207 126 aa5.29□□□□□ -1.56
RGD2YFL047W YLR363W-AQ3E747 85 aa5.29□□□□□ -1.56
RGD2YFL047W RPL27BP0C2H7 136 aaKnown RBP5.28□□□□□ -1.56
RGD2YFL047W YHR140WP38842 239 aa5.28□□□□□ -1.56
RGD2YFL047W COX16P47081 118 aa5.28□□□□□ -1.56
RGD2YFL047W YGR219WP53307 113 aa5.28□□□□□ -1.56
RGD2YFL047W AIR2Q12476 344 aaKnown RBP5.28□□□□□ -1.56
RGD2YFL047W DFM1Q12743 341 aaKnown RBP5.28□□□□□ -1.56
RGD2YFL047W DGA1Q08650 418 aa5.27□□□□□ -1.57
RGD2YFL047W TIM22Q12328 207 aa5.27□□□□□ -1.57
RGD2YFL047W ADH2P00331 348 aaKnown RBP5.27□□□□□ -1.57
RGD2YFL047W PHO85P17157 305 aa5.27□□□□□ -1.57
RGD2YFL047W APS1P35181 156 aa5.27□□□□□ -1.57
RGD2YFL047W ELF1P36053 145 aa5.27□□□□□ -1.57
RGD2YFL047W SPI1P40092 148 aa5.27□□□□□ -1.57
RGD2YFL047W YIR020CP40575 100 aa5.27□□□□□ -1.57
RGD2YFL047W MGR2Q02889 113 aa5.27□□□□□ -1.57
RGD2YFL047W TMC1Q08422 150 aaPredicted RBP5.27□□□□□ -1.57
RGD2YFL047W SAL1D6W196 494 aa5.26□□□□□ -1.57
RGD2YFL047W CMC1P36064 111 aa5.26□□□□□ -1.57
RGD2YFL047W CAB4P53332 305 aa5.26□□□□□ -1.57
RGD2YFL047W ATG39Q06159 398 aa5.26□□□□□ -1.57
RGD2YFL047W YKL044WP36092 106 aa5.26□□□□□ -1.57
RGD2YFL047W POR2P40478 281 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 86.2 ms