RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C YPL162CQ12042 273 aa5.21□□□□□ -1.58
YPT1YFL038C FCY1Q12178 158 aa5.21□□□□□ -1.58
YPT1YFL038C UTP23Q12339 254 aaKnown RBP5.21□□□□□ -1.58
YPT1YFL038C TRA1P38811 3744 aa5.21□□□□□ -1.58
YPT1YFL038C YFL068WP0CX99 160 aa5.2□□□□□ -1.58
YPT1YFL038C YLL066W-AP0CY00 160 aa5.2□□□□□ -1.58
YPT1YFL038C YLL067W-AP0CY01 160 aa5.2□□□□□ -1.58
YPT1YFL038C SPS100P13130 326 aa5.2□□□□□ -1.58
YPT1YFL038C HAP3P13434 144 aa5.2□□□□□ -1.58
YPT1YFL038C PHO85P17157 305 aa5.2□□□□□ -1.58
YPT1YFL038C FEN2P25621 512 aaKnown RBP5.2□□□□□ -1.58
YPT1YFL038C MIG1P27705 504 aa5.2□□□□□ -1.58
YPT1YFL038C FYV4P38783 130 aaPredicted RBP5.2□□□□□ -1.58
YPT1YFL038C GPP2P40106 250 aaKnown RBP5.2□□□□□ -1.58
YPT1YFL038C YNL200CP40165 246 aaKnown RBP5.2□□□□□ -1.58
YPT1YFL038C NCA3P46955 337 aa5.2□□□□□ -1.58
YPT1YFL038C YGL230CP53074 147 aa5.2□□□□□ -1.58
YPT1YFL038C UPS3Q04006 179 aa5.2□□□□□ -1.58
YPT1YFL038C WIP1Q2V2P8 89 aa5.2□□□□□ -1.58
YPT1YFL038C RPL12AP0CX53 165 aaKnown RBP5.19□□□□□ -1.58
YPT1YFL038C RPL12BP0CX54 165 aa5.19□□□□□ -1.58
YPT1YFL038C SEC11P15367 167 aa5.19□□□□□ -1.58
YPT1YFL038C ERS1P17261 260 aa5.19□□□□□ -1.58
YPT1YFL038C CPT1P17898 393 aa5.19□□□□□ -1.58
YPT1YFL038C VMA16P23968 213 aa5.19□□□□□ -1.58
YPT1YFL038C UIP3P39547 235 aa5.19□□□□□ -1.58
YPT1YFL038C YMR141CP40211 102 aa5.19□□□□□ -1.58
YPT1YFL038C PBP4Q07362 185 aaKnown RBP5.19□□□□□ -1.58
YPT1YFL038C TIM18Q08749 192 aa5.19□□□□□ -1.58
YPT1YFL038C YLR342W-AQ3E810 57 aa5.19□□□□□ -1.58
YPT1YFL038C UTR5P32630 166 aa5.18□□□□□ -1.58
YPT1YFL038C YHL044WP38727 235 aa5.18□□□□□ -1.58
YPT1YFL038C YIR020CP40575 100 aa5.18□□□□□ -1.58
YPT1YFL038C YPI1P43587 155 aa5.18□□□□□ -1.58
YPT1YFL038C THG1P53215 237 aaKnown RBP5.18□□□□□ -1.58
YPT1YFL038C YGR219WP53307 113 aa5.18□□□□□ -1.58
YPT1YFL038C POP3P53833 195 aaPredicted RBP5.18□□□□□ -1.58
YPT1YFL038C UBC7Q02159 165 aa5.18□□□□□ -1.58
YPT1YFL038C IRC23Q08416 157 aa5.18□□□□□ -1.58
YPT1YFL038C YLR050CQ12155 161 aaKnown RBP5.18□□□□□ -1.58
YPT1YFL038C HTL1Q9URQ5 78 aa5.18□□□□□ -1.58
YPT1YFL038C YBR056W-AI2HB52 66 aa5.17□□□□□ -1.58
YPT1YFL038C RPL27AP0C2H6 136 aaKnown RBP5.17□□□□□ -1.58
YPT1YFL038C POR2P40478 281 aa5.17□□□□□ -1.58
YPT1YFL038C MSL1P40567 111 aaPredicted RBP5.17□□□□□ -1.58
YPT1YFL038C TVP18Q04767 167 aa5.17□□□□□ -1.58
YPT1YFL038C GTO3Q04806 366 aa5.17□□□□□ -1.58
YPT1YFL038C DPP1Q05521 289 aa5.17□□□□□ -1.58
YPT1YFL038C GRH1Q04410 372 aaKnown RBP5.16□□□□□ -1.58
YPT1YFL038C SNU13P39990 126 aaKnown RBP5.15□□□□□ -1.59
YPT1YFL038C YJR096WP47137 282 aa5.15□□□□□ -1.59
YPT1YFL038C ABM1P47146 123 aa5.15□□□□□ -1.59
YPT1YFL038C YIL014C-AQ02598 104 aa5.15□□□□□ -1.59
YPT1YFL038C BET5Q03630 159 aa5.15□□□□□ -1.59
YPT1YFL038C GPI19Q04082 140 aa5.15□□□□□ -1.59
YPT1YFL038C YOL160WQ08321 113 aa5.15□□□□□ -1.59
YPT1YFL038C RDL1Q12305 139 aaKnown RBP5.15□□□□□ -1.59
YPT1YFL038C SPO24Q3E752 67 aa5.15□□□□□ -1.59
YPT1YFL038C MIC12P38341 106 aa5.14□□□□□ -1.59
YPT1YFL038C YHR140WP38842 239 aa5.14□□□□□ -1.59
YPT1YFL038C SPI1P40092 148 aa5.14□□□□□ -1.59
YPT1YFL038C YIL012WP40551 113 aa5.14□□□□□ -1.59
YPT1YFL038C WWM1P43582 211 aaKnown RBP5.14□□□□□ -1.59
YPT1YFL038C COX16P47081 118 aa5.14□□□□□ -1.59
YPT1YFL038C TIM10P87108 93 aa5.14□□□□□ -1.59
YPT1YFL038C CWC27Q02770 301 aa5.14□□□□□ -1.59
YPT1YFL038C YDR042CQ03205 200 aa5.14□□□□□ -1.59
YPT1YFL038C VPS71Q03433 280 aa5.14□□□□□ -1.59
YPT1YFL038C TMC1Q08422 150 aaPredicted RBP5.14□□□□□ -1.59
YPT1YFL038C TIM22Q12328 207 aa5.14□□□□□ -1.59
YPT1YFL038C SCS22Q6Q595 175 aa5.14□□□□□ -1.59
YPT1YFL038C TEL1P38110 2787 aa5.13□□□□□ -1.59
YPT1YFL038C RPL27BP0C2H7 136 aaKnown RBP5.13□□□□□ -1.59
YPT1YFL038C YCR023CP25351 611 aa5.13□□□□□ -1.59
YPT1YFL038C VMA11P32842 164 aa5.13□□□□□ -1.59
YPT1YFL038C CMC1P36064 111 aa5.13□□□□□ -1.59
YPT1YFL038C YKR032WP36127 104 aa5.13□□□□□ -1.59
YPT1YFL038C PET8P38921 284 aa5.13□□□□□ -1.59
YPT1YFL038C MST27P53176 234 aa5.13□□□□□ -1.59
YPT1YFL038C YGR017WP53210 297 aa5.13□□□□□ -1.59
YPT1YFL038C YML122CQ03207 126 aa5.13□□□□□ -1.59
YPT1YFL038C GEP3Q08622 556 aa5.13□□□□□ -1.59
YPT1YFL038C YKR070WP36151 352 aaKnown RBP5.12□□□□□ -1.59
YPT1YFL038C SNF11P38956 169 aa5.12□□□□□ -1.59
YPT1YFL038C YER188WP40103 239 aa5.12□□□□□ -1.59
YPT1YFL038C MGR2Q02889 113 aa5.12□□□□□ -1.59
YPT1YFL038C YMR317WQ04893 1140 aa5.12□□□□□ -1.59
YPT1YFL038C MSC3Q05812 728 aa5.12□□□□□ -1.59
YPT1YFL038C YPR170W-BP0C5R9 85 aa5.11□□□□□ -1.59
YPT1YFL038C APS1P35181 156 aa5.11□□□□□ -1.59
YPT1YFL038C LCB3P47013 409 aa5.11□□□□□ -1.59
YPT1YFL038C CAB4P53332 305 aa5.11□□□□□ -1.59
YPT1YFL038C RPL15BP54780 204 aaPredicted RBP5.11□□□□□ -1.59
YPT1YFL038C ATG39Q06159 398 aa5.11□□□□□ -1.59
YPT1YFL038C MRP49P32388 137 aa5.1□□□□□ -1.59
YPT1YFL038C YKL044WP36092 106 aa5.1□□□□□ -1.59
YPT1YFL038C YNL194CP40169 301 aa5.1□□□□□ -1.59
YPT1YFL038C NCE103P53615 221 aa5.1□□□□□ -1.59
YPT1YFL038C MOT3P54785 490 aaKnown RBP5.1□□□□□ -1.59
YPT1YFL038C PFY1P07274 126 aa5.09□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 106.1 ms