RNA–Protein interactions for RNA: YEL041W

YEF1, Transcript of ATP-NADH kinase, yeast

Gene YEF1, Length 1,488 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YEF1	YEL041W	YPL264C	Q08980	353 aa		4.12	□□□□□ -1.75
YEF1	YEL041W	SPC3	Q12133	184 aa		4.12	□□□□□ -1.75
YEF1	YEL041W	YFR032C-B	Q8TGU2	87 aa		4.12	□□□□□ -1.75
YEF1	YEL041W	SPO73	P40031	143 aa		4.11	□□□□□ -1.75
YEF1	YEL041W	RIO2	P40160	425 aa	Known RBP	4.11	□□□□□ -1.75
YEF1	YEL041W	FIP1	P45976	327 aa		4.11	□□□□□ -1.75
YEF1	YEL041W	GPI2	P46961	280 aa		4.11	□□□□□ -1.75
YEF1	YEL041W	YLR179C	Q06252	201 aa	Known RBP	4.11	□□□□□ -1.75
YEF1	YEL041W	DGK1	Q12382	290 aa		4.11	□□□□□ -1.75
YEF1	YEL041W	YAE1	P47118	141 aa	Predicted RBP	4.11	□□□□□ -1.75
YEF1	YEL041W	VPS28	Q02767	242 aa		4.11	□□□□□ -1.75
YEF1	YEL041W	CDC39	P25655	2108 aa	Known RBP	4.1	□□□□□ -1.75
YEF1	YEL041W	ATP5	P09457	212 aa		4.1	□□□□□ -1.75
YEF1	YEL041W	UTP30	P36144	274 aa	Known RBP	4.1	□□□□□ -1.75
YEF1	YEL041W	GVP36	P40531	326 aa	Known RBP	4.1	□□□□□ -1.75
YEF1	YEL041W	APJ1	P53940	528 aa		4.1	□□□□□ -1.75
YEF1	YEL041W	ADK1	P07170	222 aa	Known RBP	4.09	□□□□□ -1.75
YEF1	YEL041W	YPR170W-B	P0C5R9	85 aa		4.09	□□□□□ -1.75
YEF1	YEL041W	BET1	P22804	142 aa		4.09	□□□□□ -1.75
YEF1	YEL041W	RPF1	P38805	295 aa	Known RBP	4.09	□□□□□ -1.75
YEF1	YEL041W	YER181C	P40097	107 aa		4.09	□□□□□ -1.75
YEF1	YEL041W	YFL051C	P43552	160 aa		4.09	□□□□□ -1.75
YEF1	YEL041W	SFT1	P43682	97 aa		4.09	□□□□□ -1.75
YEF1	YEL041W	RCE1	Q03530	315 aa		4.09	□□□□□ -1.75
YEF1	YEL041W	UIP4	Q08926	304 aa		4.09	□□□□□ -1.75
YEF1	YEL041W	RPB3	P16370	318 aa	Known RBP	4.08	□□□□□ -1.76
YEF1	YEL041W	RNP1	P32385	249 aa		4.08	□□□□□ -1.76
YEF1	YEL041W	SHB17	P36136	271 aa	Known RBP	4.08	□□□□□ -1.76
YEF1	YEL041W	RPA43	P46669	326 aa		4.08	□□□□□ -1.76
YEF1	YEL041W	HRT1	Q08273	121 aa		4.08	□□□□□ -1.76
YEF1	YEL041W	YOR097C	Q12274	175 aa	Predicted RBP	4.08	□□□□□ -1.76
YEF1	YEL041W	KTI11	Q3E840	82 aa		4.08	□□□□□ -1.76
YEF1	YEL041W	UTP20	P35194	2493 aa	Known RBP	4.08	□□□□□ -1.76
YEF1	YEL041W	ADH3	P07246	375 aa	Known RBP	4.07	□□□□□ -1.76
YEF1	YEL041W	SPS2	P08459	502 aa		4.07	□□□□□ -1.76
YEF1	YEL041W	YHR140W	P38842	239 aa		4.07	□□□□□ -1.76
YEF1	YEL041W	YER084W	P40057	128 aa		4.07	□□□□□ -1.76
YEF1	YEL041W	PFS2	P42841	465 aa	Known RBP	4.07	□□□□□ -1.76
YEF1	YEL041W	BLM10	P43583	2143 aa		4.07	□□□□□ -1.76
YEF1	YEL041W	SIP18	P50263	79 aa		4.07	□□□□□ -1.76
YEF1	YEL041W	YDR102C	Q03864	110 aa		4.07	□□□□□ -1.76
YEF1	YEL041W	ELP6	Q04868	273 aa		4.07	□□□□□ -1.76
YEF1	YEL041W	YLR412C-A	Q3E742	68 aa		4.07	□□□□□ -1.76
YEF1	YEL041W	VAR1	P02381	398 aa		4.06	□□□□□ -1.76
YEF1	YEL041W	MSW1	P04803	379 aa		4.06	□□□□□ -1.76
YEF1	YEL041W	YER039C-A	P0CD97	72 aa		4.06	□□□□□ -1.76
YEF1	YEL041W	URA5	P13298	226 aa	Known RBP	4.06	□□□□□ -1.76
YEF1	YEL041W	MSA2	P36157	363 aa		4.06	□□□□□ -1.76
YEF1	YEL041W	YGL193C	P53097	103 aa		4.06	□□□□□ -1.76
YEF1	YEL041W	SEC16	P48415	2195 aa	Known RBP	4.06	□□□□□ -1.76
YEF1	YEL041W	ANB1	P19211	157 aa		4.05	□□□□□ -1.76
YEF1	YEL041W	TRS20	P38334	175 aa		4.05	□□□□□ -1.76
YEF1	YEL041W	YFR045W	P43617	309 aa		4.05	□□□□□ -1.76
YEF1	YEL041W	YML100W-A	Q8TGT0	57 aa		4.05	□□□□□ -1.76
YEF1	YEL041W	SEC59	P20048	519 aa		4.05	□□□□□ -1.76
YEF1	YEL041W	TOM40	P23644	387 aa	Known RBP	4.05	□□□□□ -1.76
YEF1	YEL041W	SPT14	P32363	452 aa		4.05	□□□□□ -1.76
YEF1	YEL041W	MID2	P36027	376 aa		4.05	□□□□□ -1.76
YEF1	YEL041W	YAR068W	P39564	161 aa		4.05	□□□□□ -1.76
YEF1	YEL041W	NAT3	Q06504	195 aa		4.05	□□□□□ -1.76
YEF1	YEL041W	YOL014W	Q08110	124 aa		4.05	□□□□□ -1.76
YEF1	YEL041W	FIT3	Q08907	204 aa		4.05	□□□□□ -1.76
YEF1	YEL041W	Q0297	Q9ZZV8	51 aa		4.05	□□□□□ -1.76
YEF1	YEL041W	CLB6	P32943	380 aa		4.04	□□□□□ -1.76
YEF1	YEL041W	YKR070W	P36151	352 aa	Known RBP	4.04	□□□□□ -1.76
YEF1	YEL041W	BUD25	P85052	153 aa		4.04	□□□□□ -1.76
YEF1	YEL041W	YLR156W	P0CE96	114 aa		4.03	□□□□□ -1.76
YEF1	YEL041W	YLR159W	P0CE97	114 aa		4.03	□□□□□ -1.76
YEF1	YEL041W	YLR161W	P0CE98	114 aa		4.03	□□□□□ -1.76
YEF1	YEL041W	RPS23A	P0CX29	145 aa	Known RBP	4.03	□□□□□ -1.76
YEF1	YEL041W	RPS23B	P0CX30	145 aa		4.03	□□□□□ -1.76
YEF1	YEL041W	VMA11	P32842	164 aa		4.03	□□□□□ -1.76
YEF1	YEL041W	RPL14A	P36105	138 aa	Known RBP	4.03	□□□□□ -1.76
YEF1	YEL041W	RPL14B	P38754	138 aa	Known RBP	4.03	□□□□□ -1.76
YEF1	YEL041W	YGL230C	P53074	147 aa		4.03	□□□□□ -1.76
YEF1	YEL041W	HUT1	Q12520	339 aa		4.03	□□□□□ -1.76
YEF1	YEL041W	AHT1	P29589	182 aa		4.02	□□□□□ -1.77
YEF1	YEL041W	YJL218W	P40892	196 aa	Known RBP	4.02	□□□□□ -1.77
YEF1	YEL041W	YFL019C	P43576	117 aa		4.02	□□□□□ -1.77
YEF1	YEL041W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
YEF1	YEL041W	YPR063C	Q12160	140 aa		4.02	□□□□□ -1.77
YEF1	YEL041W	YGL041W-A	P0C5N3	154 aa		4.01	□□□□□ -1.77
YEF1	YEL041W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	not detected
YEF1	YEL041W	RPB11	P38902	120 aa		4.01	□□□□□ -1.77
YEF1	YEL041W	YER134C	P40081	178 aa		4.01	□□□□□ -1.77
YEF1	YEL041W	SBH1	P52870	82 aa		4.01	□□□□□ -1.77
YEF1	YEL041W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	not detected
YEF1	YEL041W	YKR005C	Q02203	525 aa		4.01	□□□□□ -1.77
YEF1	YEL041W	BPH1	P25356	2167 aa		4	□□□□□ -1.77
YEF1	YEL041W	SOD1	P00445	154 aa	Known RBP	4	□□□□□ -1.77
YEF1	YEL041W	HSP12	P22943	109 aa	Known RBP	4	□□□□□ -1.77
YEF1	YEL041W	RCN1	P36054	211 aa		4	□□□□□ -1.77
YEF1	YEL041W	HTD2	P38790	280 aa	Known RBP	4	□□□□□ -1.77
YEF1	YEL041W	YNL200C	P40165	246 aa	Known RBP	4	□□□□□ -1.77
YEF1	YEL041W	DAD3	P69850	94 aa		4	□□□□□ -1.77
YEF1	YEL041W	SED1	Q01589	338 aa		4	□□□□□ -1.77
YEF1	YEL041W	FCF1	Q05498	189 aa	Predicted RBP	4	□□□□□ -1.77
YEF1	YEL041W	YLR042C	Q07990	161 aa		4	□□□□□ -1.77
YEF1	YEL041W	ATP15	P21306	62 aa		3.99	□□□□□ -1.77
YEF1	YEL041W	YBR090C	P38253	122 aa		3.99	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms