RNA–Protein interactions for RNA: YDR494W

RSM28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene RSM28, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSM28YDR494W RPL40AP0CH08 128 aaKnown RBP0.63□□□□□ -2.31
RSM28YDR494W RPL40BP0CH09 128 aaKnown RBP0.63□□□□□ -2.31
RSM28YDR494W FUN14P18411 198 aa0.63□□□□□ -2.31
RSM28YDR494W CDC39P25655 2108 aaKnown RBP0.63□□□□□ -2.31
RSM28YDR494W GIM4P40005 111 aaKnown RBP0.63□□□□□ -2.31
RSM28YDR494W VMA10P48836 114 aaKnown RBP0.63□□□□□ -2.31
RSM28YDR494W EMC4P53073 190 aa0.63□□□□□ -2.31
RSM28YDR494W SED1Q01589 338 aa0.63□□□□□ -2.31
RSM28YDR494W ELC1Q03071 99 aa0.63□□□□□ -2.31
RSM28YDR494W HUT1Q12520 339 aa0.63□□□□□ -2.31
RSM28YDR494W RPS22BQ3E7Y3 130 aaKnown RBP0.63□□□□□ -2.31
RSM28YDR494W MHF1Q3E835 90 aa0.63□□□□□ -2.31
RSM28YDR494W DDP1Q99321 188 aaKnown RBP0.63□□□□□ -2.31
RSM28YDR494W HSL1P34244 1518 aa0.63□□□□□ -2.31
RSM28YDR494W RPL33AP05744 107 aaKnown RBP0.62□□□□□ -2.31
RSM28YDR494W SUA7P29055 345 aaPredicted RBP0.62□□□□□ -2.31
RSM28YDR494W RPS20P38701 121 aaKnown RBP0.62□□□□□ -2.31
RSM28YDR494W SFT1P43682 97 aa0.62□□□□□ -2.31
RSM28YDR494W LSM8P47093 109 aaKnown RBP0.62□□□□□ -2.31
RSM28YDR494W YGL149WP53116 101 aa0.62□□□□□ -2.31
RSM28YDR494W QCR10P37299 77 aa0.61□□□□□ -2.31
RSM28YDR494W POP7P38291 140 aa0.61□□□□□ -2.31
RSM28YDR494W AIM4P38305 123 aaPredicted RBP0.61□□□□□ -2.31
RSM28YDR494W PHS1P40857 217 aa0.61□□□□□ -2.31
RSM28YDR494W SPG1P50088 95 aa0.61□□□□□ -2.31
RSM28YDR494W DYN2Q02647 92 aa0.61□□□□□ -2.31
RSM28YDR494W YPL067CQ02754 198 aa0.61□□□□□ -2.31
RSM28YDR494W RAF1Q06891 181 aa0.61□□□□□ -2.31
RSM28YDR494W PRM3Q08931 133 aa0.61□□□□□ -2.31
RSM28YDR494W YNL277W-AQ3E7Z0 62 aa0.61□□□□□ -2.31
RSM28YDR494W YOR376W-AQ3E805 51 aa0.61□□□□□ -2.31
RSM28YDR494W RAD50P12753 1312 aa0.61□□□□□ -2.31
RSM28YDR494W RTC6O14464 93 aa0.6□□□□□ -2.31
RSM28YDR494W NMT1P14743 455 aa0.6□□□□□ -2.31
RSM28YDR494W UTP11P34247 250 aaPredicted RBP0.6□□□□□ -2.31
RSM28YDR494W SFT2P38166 215 aa0.6□□□□□ -2.31
RSM28YDR494W BRP1P53194 125 aa0.6□□□□□ -2.31
RSM28YDR494W YGR017WP53210 297 aa0.6□□□□□ -2.31
RSM28YDR494W YMR122CQ03879 124 aa0.6□□□□□ -2.31
RSM28YDR494W SDH7Q04401 133 aa0.6□□□□□ -2.31
RSM28YDR494W YDR278CQ05612 105 aa0.6□□□□□ -2.31
RSM28YDR494W CNL1Q06333 122 aa0.6□□□□□ -2.31
RSM28YDR494W NAT5Q08689 176 aa0.6□□□□□ -2.31
RSM28YDR494W ATP14Q12349 124 aa0.6□□□□□ -2.31
RSM28YDR494W MRP49P32388 137 aa0.59□□□□□ -2.31
RSM28YDR494W GAT4P40569 121 aa0.59□□□□□ -2.31
RSM28YDR494W LST8P41318 303 aa0.59□□□□□ -2.31
RSM28YDR494W GTT2Q12390 233 aa0.59□□□□□ -2.31
RSM28YDR494W GSC2P40989 1895 aa0.58□□□□□ -2.32
RSM28YDR494W PAU21P0CE86 164 aa0.58□□□□□ -2.32
RSM28YDR494W PAU22P0CE87 164 aa0.58□□□□□ -2.32
RSM28YDR494W YHR213WP0CI67 198 aa0.58□□□□□ -2.32
RSM28YDR494W MRPL44P19956 98 aa0.58□□□□□ -2.32
RSM28YDR494W YMR141CP40211 102 aa0.58□□□□□ -2.32
RSM28YDR494W YLR099W-AQ3E798 87 aa0.58□□□□□ -2.32
RSM28YDR494W SNT2P53127 1403 aa0.57□□□□□ -2.32
RSM28YDR494W SRL3P36167 246 aa0.57□□□□□ -2.32
RSM28YDR494W AIM18P38884 321 aa0.57□□□□□ -2.32
RSM28YDR494W HSP10P38910 106 aa0.57□□□□□ -2.32
RSM28YDR494W SAE3P89114 91 aa0.57□□□□□ -2.32
RSM28YDR494W COA4Q05809 96 aa0.57□□□□□ -2.32
RSM28YDR494W YLR296WQ05898 108 aa0.57□□□□□ -2.32
RSM28YDR494W NKP2Q06162 153 aa0.57□□□□□ -2.32
RSM28YDR494W Q0144Q9ZZW2 109 aa0.57□□□□□ -2.32
RSM28YDR494W ADK1P07170 222 aaKnown RBP0.56□□□□□ -2.32
RSM28YDR494W HAP3P13434 144 aa0.56□□□□□ -2.32
RSM28YDR494W ANB1P19211 157 aa0.56□□□□□ -2.32
RSM28YDR494W YKL044WP36092 106 aa0.56□□□□□ -2.32
RSM28YDR494W MRPL11P36521 249 aaPredicted RBP0.56□□□□□ -2.32
RSM28YDR494W YJL009WP47078 108 aa0.56□□□□□ -2.32
RSM28YDR494W IRC21Q04772 201 aa0.56□□□□□ -2.32
RSM28YDR494W YLR194CQ05777 254 aa0.56□□□□□ -2.32
RSM28YDR494W WIP1Q2V2P8 89 aa0.56□□□□□ -2.32
RSM28YDR494W KTI11Q3E840 82 aa0.56□□□□□ -2.32
RSM28YDR494W SEC59P20048 519 aa0.55□□□□□ -2.32
RSM28YDR494W YBR013CP38215 129 aa0.55□□□□□ -2.32
RSM28YDR494W YHR130CP38834 111 aa0.55□□□□□ -2.32
RSM28YDR494W MIC27P50945 234 aa0.55□□□□□ -2.32
RSM28YDR494W ERV14P53173 138 aa0.55□□□□□ -2.32
RSM28YDR494W PAU12P53343 120 aa0.55□□□□□ -2.32
RSM28YDR494W YIL014C-AQ02598 104 aa0.55□□□□□ -2.32
RSM28YDR494W YLR118CQ12354 227 aa0.55□□□□□ -2.32
RSM28YDR494W MYO2P19524 1574 aaKnown RBP0.54□□□□□ -2.32
RSM28YDR494W YSF3P0C074 85 aaPredicted RBP0.54□□□□□ -2.32
RSM28YDR494W SNF11P38956 169 aa0.54□□□□□ -2.32
RSM28YDR494W VMA7P39111 118 aa0.54□□□□□ -2.32
RSM28YDR494W GPI19Q04082 140 aa0.54□□□□□ -2.32
RSM28YDR494W SPC24Q04477 213 aa0.54□□□□□ -2.32
RSM28YDR494W FRQ1Q06389 190 aa0.54□□□□□ -2.32
RSM28YDR494W FCF2Q12035 217 aaPredicted RBP0.54□□□□□ -2.32
RSM28YDR494W SLO1Q3E784 85 aa0.54□□□□□ -2.32
RSM28YDR494W TRM732Q03496 1420 aa0.54□□□□□ -2.32
RSM28YDR494W RPL43AP0CX25 92 aaKnown RBP0.53□□□□□ -2.32
RSM28YDR494W RPL43BP0CX26 92 aa0.53□□□□□ -2.32
RSM28YDR494W GSP1P32835 219 aaKnown RBP0.53□□□□□ -2.32
RSM28YDR494W RPB11P38902 120 aa0.53□□□□□ -2.32
RSM28YDR494W YAR029WP39549 74 aa0.53□□□□□ -2.32
RSM28YDR494W YIL163CP40448 117 aa0.53□□□□□ -2.32
RSM28YDR494W MVB12P42939 101 aa0.53□□□□□ -2.32
RSM28YDR494W YFR035CP43608 114 aa0.53□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 39.6 ms