RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	COA6	Q3E846	104 aa		3.73	□□□□□ -1.81
SUP35	YDR172W	HMRA1	P0CY11	126 aa		3.72	□□□□□ -1.81
SUP35	YDR172W	MRPL44	P19956	98 aa		3.72	□□□□□ -1.81
SUP35	YDR172W	YPT10	P38146	199 aa		3.72	□□□□□ -1.81
SUP35	YDR172W	MBB1	P39534	108 aa		3.72	□□□□□ -1.81
SUP35	YDR172W	CDC40	P40968	455 aa	Predicted RBP	3.72	□□□□□ -1.81
SUP35	YDR172W	IMP2	P46972	177 aa		3.72	□□□□□ -1.81
SUP35	YDR172W	YJL027C	P47063	138 aa	Predicted RBP	3.72	□□□□□ -1.81
SUP35	YDR172W	BNA1	P47096	177 aa		3.72	□□□□□ -1.81
SUP35	YDR172W	YDL183C	P48569	320 aa		3.72	□□□□□ -1.81
SUP35	YDR172W	SDS23	P53172	527 aa		3.72	□□□□□ -1.81
SUP35	YDR172W	DUG3	P53871	357 aa		3.72	□□□□□ -1.81
SUP35	YDR172W	DAD4	P69851	72 aa		3.72	□□□□□ -1.81
SUP35	YDR172W	YML122C	Q03207	126 aa		3.72	□□□□□ -1.81
SUP35	YDR172W	GIM5	Q04493	163 aa		3.72	□□□□□ -1.81
SUP35	YDR172W	HTB2	P02294	131 aa		3.72	□□□□□ -1.81
SUP35	YDR172W	MRPL31	P14063	131 aa	Predicted RBP	3.72	□□□□□ -1.81
SUP35	YDR172W	YJL028W	P47062	111 aa		3.72	□□□□□ -1.81
SUP35	YDR172W	RPS22B	Q3E7Y3	130 aa	Known RBP	3.72	□□□□□ -1.81
SUP35	YDR172W	ZRT1	P32804	376 aa		3.71	□□□□□ -1.82
SUP35	YDR172W	YFR045W	P43617	309 aa		3.71	□□□□□ -1.82
SUP35	YDR172W	YMR181C	Q03231	154 aa		3.71	□□□□□ -1.82
SUP35	YDR172W	YMR317W	Q04893	1140 aa		3.71	□□□□□ -1.82
SUP35	YDR172W	CSM4	Q08955	156 aa		3.71	□□□□□ -1.82
SUP35	YDR172W	ATX2	Q12067	313 aa		3.71	□□□□□ -1.82
SUP35	YDR172W	RPL31B	P0C2H9	113 aa	Known RBP	3.71	□□□□□ -1.82
SUP35	YDR172W	GSP1	P32835	219 aa	Known RBP	3.71	□□□□□ -1.82
SUP35	YDR172W	GSP2	P32836	220 aa	Known RBP	3.71	□□□□□ -1.82
SUP35	YDR172W	YGR025W	P53216	100 aa		3.71	□□□□□ -1.82
SUP35	YDR172W	PKR1	Q03880	122 aa	Known RBP	3.71	□□□□□ -1.82
SUP35	YDR172W	COX2	P00410	251 aa		3.7	□□□□□ -1.82
SUP35	YDR172W	CYC3	P06182	269 aa		3.7	□□□□□ -1.82
SUP35	YDR172W	RPL23A	P0CX41	137 aa	Known RBP	3.7	□□□□□ -1.82
SUP35	YDR172W	RPL23B	P0CX42	137 aa	Known RBP	3.7	□□□□□ -1.82
SUP35	YDR172W	YER190C-B	P0CX94	160 aa		3.7	□□□□□ -1.82
SUP35	YDR172W	YEL077W-A	P0CX95	160 aa		3.7	□□□□□ -1.82
SUP35	YDR172W	YGR296C-B	P0CX96	160 aa		3.7	□□□□□ -1.82
SUP35	YDR172W	YPL283W-B	P0CX97	160 aa		3.7	□□□□□ -1.82
SUP35	YDR172W	YPR204C-A	P0CX98	160 aa		3.7	□□□□□ -1.82
SUP35	YDR172W	FEN2	P25621	512 aa	Known RBP	3.7	□□□□□ -1.82
SUP35	YDR172W	FSF1	Q12029	327 aa	Known RBP	3.7	□□□□□ -1.82
SUP35	YDR172W	AME1	P38313	324 aa		3.69	□□□□□ -1.82
SUP35	YDR172W	TEM1	P38987	245 aa		3.69	□□□□□ -1.82
SUP35	YDR172W	YNL200C	P40165	246 aa	Known RBP	3.69	□□□□□ -1.82
SUP35	YDR172W	RPA43	P46669	326 aa		3.69	□□□□□ -1.82
SUP35	YDR172W	LCB3	P47013	409 aa		3.69	□□□□□ -1.82
SUP35	YDR172W	CWC27	Q02770	301 aa		3.69	□□□□□ -1.82
SUP35	YDR172W	YOL160W	Q08321	113 aa		3.69	□□□□□ -1.82
SUP35	YDR172W	TIM18	Q08749	192 aa		3.69	□□□□□ -1.82
SUP35	YDR172W	DAD1	Q12248	94 aa		3.69	□□□□□ -1.82
SUP35	YDR172W	WIP1	Q2V2P8	89 aa		3.69	□□□□□ -1.82
SUP35	YDR172W	MIG1	P27705	504 aa		3.69	□□□□□ -1.82
SUP35	YDR172W	YGR219W	P53307	113 aa		3.69	□□□□□ -1.82
SUP35	YDR172W	ARC18	Q05933	178 aa	Known RBP	3.69	□□□□□ -1.82
SUP35	YDR172W	NAT5	Q08689	176 aa		3.69	□□□□□ -1.82
SUP35	YDR172W	POM33	Q12164	279 aa		3.69	□□□□□ -1.82
SUP35	YDR172W	FYV7	Q12247	151 aa		3.69	□□□□□ -1.82
SUP35	YDR172W	CPT1	P17898	393 aa		3.68	□□□□□ -1.82
SUP35	YDR172W	MDM10	P18409	493 aa		3.68	□□□□□ -1.82
SUP35	YDR172W	PRE5	P40302	234 aa	Known RBP	3.68	□□□□□ -1.82
SUP35	YDR172W	BRP1	P53194	125 aa		3.68	□□□□□ -1.82
SUP35	YDR172W	THG1	P53215	237 aa	Known RBP	3.68	□□□□□ -1.82
SUP35	YDR172W	UBC7	Q02159	165 aa		3.68	□□□□□ -1.82
SUP35	YDR172W	TRI1	Q05024	226 aa		3.68	□□□□□ -1.82
SUP35	YDR172W	TPT1	Q12272	230 aa	Known RBP	3.68	□□□□□ -1.82
SUP35	YDR172W	SCS22	Q6Q595	175 aa		3.68	□□□□□ -1.82
SUP35	YDR172W	PAU16	P35994	123 aa		3.67	□□□□□ -1.82
SUP35	YDR172W	AIM29	P36154	155 aa		3.67	□□□□□ -1.82
SUP35	YDR172W	YGR017W	P53210	297 aa		3.67	□□□□□ -1.82
SUP35	YDR172W	RPL15B	P54780	204 aa	Predicted RBP	3.67	□□□□□ -1.82
SUP35	YDR172W	MSC3	Q05812	728 aa		3.67	□□□□□ -1.82
SUP35	YDR172W	YPR014C	Q6B0W2	109 aa		3.67	□□□□□ -1.82
SUP35	YDR172W	RPB9	P27999	122 aa		3.67	□□□□□ -1.82
SUP35	YDR172W	YKL102C	P34249	101 aa		3.67	□□□□□ -1.82
SUP35	YDR172W	YCL042W	P25572	119 aa		3.66	□□□□□ -1.82
SUP35	YDR172W	PET8	P38921	284 aa		3.66	□□□□□ -1.82
SUP35	YDR172W	PAU7	P39545	55 aa		3.66	□□□□□ -1.82
SUP35	YDR172W	YER188W	P40103	239 aa		3.66	□□□□□ -1.82
SUP35	YDR172W	SRL1	Q08673	210 aa		3.66	□□□□□ -1.82
SUP35	YDR172W	YPR013C	Q12145	317 aa		3.66	□□□□□ -1.82
SUP35	YDR172W	MRPL20	P22354	195 aa	Predicted RBP	3.66	□□□□□ -1.82
SUP35	YDR172W	INO2	P26798	304 aa		3.66	□□□□□ -1.82
SUP35	YDR172W	PRS4	P38063	326 aa	Predicted RBP	3.66	□□□□□ -1.82
SUP35	YDR172W	MIC12	P38341	106 aa		3.66	□□□□□ -1.82
SUP35	YDR172W	UIP3	P39547	235 aa		3.66	□□□□□ -1.82
SUP35	YDR172W	SEC72	P39742	193 aa	Known RBP	3.66	□□□□□ -1.82
SUP35	YDR172W	POR2	P40478	281 aa		3.66	□□□□□ -1.82
SUP35	YDR172W	YGL118C	P53132	145 aa		3.66	□□□□□ -1.82
SUP35	YDR172W	CAB4	P53332	305 aa		3.66	□□□□□ -1.82
SUP35	YDR172W	SAE3	P89114	91 aa		3.66	□□□□□ -1.82
SUP35	YDR172W	RPL15A	P05748	204 aa	Known RBP	3.65	□□□□□ -1.83
SUP35	YDR172W	ATP5	P09457	212 aa		3.65	□□□□□ -1.83
SUP35	YDR172W	YKR032W	P36127	104 aa		3.65	□□□□□ -1.83
SUP35	YDR172W	YDL157C	Q12082	118 aa		3.65	□□□□□ -1.83
SUP35	YDR172W	YDL085C-A	Q3E7B7	68 aa	Known RBP	3.65	□□□□□ -1.83
SUP35	YDR172W	YLR342W-A	Q3E810	57 aa		3.65	□□□□□ -1.83
SUP35	YDR172W	CDC43	P18898	376 aa		3.64	□□□□□ -1.83
SUP35	YDR172W	CMC1	P36064	111 aa		3.64	□□□□□ -1.83
SUP35	YDR172W	MST28	P39552	234 aa		3.64	□□□□□ -1.83
SUP35	YDR172W	HAC1	P41546	238 aa		3.64	□□□□□ -1.83

Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms