RNA–Protein interactions for RNA: YDR136C

VPS61, Transcript of Dubious open reading frame, yeastyeast

Gene VPS61, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS61YDR136C VPS71Q03433 280 aa5.06□□□□□ -1.6
VPS61YDR136C TIM18Q08749 192 aa5.06□□□□□ -1.6
VPS61YDR136C ATO3Q12359 275 aa5.06□□□□□ -1.6
VPS61YDR136C WIP1Q2V2P8 89 aa5.06□□□□□ -1.6
VPS61YDR136C MBF1O14467 151 aaKnown RBP5.05□□□□□ -1.6
VPS61YDR136C ADH2P00331 348 aaKnown RBP5.05□□□□□ -1.6
VPS61YDR136C DDI2P0CH63 225 aa5.05□□□□□ -1.6
VPS61YDR136C DDI3P0CH64 225 aa5.05□□□□□ -1.6
VPS61YDR136C PRE1P22141 198 aaKnown RBP5.05□□□□□ -1.6
VPS61YDR136C RRT1P38192 103 aa5.05□□□□□ -1.6
VPS61YDR136C GPP2P40106 250 aaKnown RBP5.05□□□□□ -1.6
VPS61YDR136C YJL213WP40896 331 aa5.05□□□□□ -1.6
VPS61YDR136C IMP2P46972 177 aa5.05□□□□□ -1.6
VPS61YDR136C MIX17Q03667 156 aa5.05□□□□□ -1.6
VPS61YDR136C GTO3Q04806 366 aa5.05□□□□□ -1.6
VPS61YDR136C YLR363W-AQ3E747 85 aa5.05□□□□□ -1.6
VPS61YDR136C SCS22Q6Q595 175 aa5.05□□□□□ -1.6
VPS61YDR136C YHR213WP0CI67 198 aa5.04□□□□□ -1.6
VPS61YDR136C RPL12AP0CX53 165 aaKnown RBP5.04□□□□□ -1.6
VPS61YDR136C RPL12BP0CX54 165 aa5.04□□□□□ -1.6
VPS61YDR136C CPT1P17898 393 aa5.04□□□□□ -1.6
VPS61YDR136C MRPL20P22354 195 aaPredicted RBP5.04□□□□□ -1.6
VPS61YDR136C YKR045CP36138 183 aa5.04□□□□□ -1.6
VPS61YDR136C ADH5P38113 351 aaKnown RBP5.04□□□□□ -1.6
VPS61YDR136C YMR141CP40211 102 aa5.04□□□□□ -1.6
VPS61YDR136C YJL163CP46996 555 aa5.04□□□□□ -1.6
VPS61YDR136C DAD4P69851 72 aa5.04□□□□□ -1.6
VPS61YDR136C BET5Q03630 159 aa5.04□□□□□ -1.6
VPS61YDR136C RXT3Q07458 294 aa5.04□□□□□ -1.6
VPS61YDR136C DAD1Q12248 94 aa5.04□□□□□ -1.6
VPS61YDR136C YKR070WP36151 352 aaKnown RBP5.03□□□□□ -1.6
VPS61YDR136C RPF1P38805 295 aaKnown RBP5.03□□□□□ -1.6
VPS61YDR136C YDL218WQ07629 317 aa5.03□□□□□ -1.6
VPS61YDR136C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.03□□□□□ -1.6not detected
VPS61YDR136C UTP23Q12339 254 aaKnown RBP5.03□□□□□ -1.6
VPS61YDR136C SAL1D6W196 494 aa5.02□□□□□ -1.61
VPS61YDR136C RPP2AP05319 106 aaKnown RBP5.02□□□□□ -1.61
VPS61YDR136C DAL80P26343 269 aa5.02□□□□□ -1.61
VPS61YDR136C TIR2P33890 251 aa5.02□□□□□ -1.61
VPS61YDR136C CTR2P38865 189 aa5.02□□□□□ -1.61
VPS61YDR136C YJL027CP47063 138 aaPredicted RBP5.02□□□□□ -1.61
VPS61YDR136C YML079WQ03629 201 aa5.02□□□□□ -1.61
VPS61YDR136C RUB1Q03919 77 aa5.02□□□□□ -1.61
VPS61YDR136C MSC3Q05812 728 aa5.02□□□□□ -1.61
VPS61YDR136C YDL009CQ12210 107 aa5.02□□□□□ -1.61
VPS61YDR136C YLR342W-AQ3E810 57 aa5.02□□□□□ -1.61
VPS61YDR136C HTL1Q9URQ5 78 aa5.02□□□□□ -1.61
VPS61YDR136C YKL044WP36092 106 aa5.01□□□□□ -1.61
VPS61YDR136C PET8P38921 284 aa5.01□□□□□ -1.61
VPS61YDR136C MBB1P39534 108 aa5.01□□□□□ -1.61
VPS61YDR136C GLE2P40066 365 aa5.01□□□□□ -1.61
VPS61YDR136C SGN1P40561 250 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
VPS61YDR136C YIP1P53039 248 aa5.01□□□□□ -1.61
VPS61YDR136C CAB4P53332 305 aa5.01□□□□□ -1.61
VPS61YDR136C YIL014C-AQ02598 104 aa5.01□□□□□ -1.61
VPS61YDR136C YCR023CP25351 611 aa5□□□□□ -1.61
VPS61YDR136C IES6P32617 166 aa5□□□□□ -1.61
VPS61YDR136C AIM29P36154 155 aa5□□□□□ -1.61
VPS61YDR136C YIL012WP40551 113 aa5□□□□□ -1.61
VPS61YDR136C COX16P47081 118 aa5□□□□□ -1.61
VPS61YDR136C YDR042CQ03205 200 aa5□□□□□ -1.61
VPS61YDR136C GPI19Q04082 140 aa5□□□□□ -1.61
VPS61YDR136C IRC25Q07951 179 aa5□□□□□ -1.61
VPS61YDR136C IZH3Q07959 543 aa5□□□□□ -1.61
VPS61YDR136C CSF1Q12150 2958 aa5□□□□□ -1.61
VPS61YDR136C RPL27AP0C2H6 136 aaKnown RBP4.99□□□□□ -1.61
VPS61YDR136C RPL27BP0C2H7 136 aaKnown RBP4.99□□□□□ -1.61
VPS61YDR136C APS1P35181 156 aa4.99□□□□□ -1.61
VPS61YDR136C PRY2P36110 329 aa4.99□□□□□ -1.61
VPS61YDR136C YKR032WP36127 104 aa4.99□□□□□ -1.61
VPS61YDR136C GPI18P38211 433 aa4.99□□□□□ -1.61
VPS61YDR136C ECM14P38836 430 aa4.99□□□□□ -1.61
VPS61YDR136C YER121WP40076 114 aa4.99□□□□□ -1.61
VPS61YDR136C YNL198CP40166 100 aa4.99□□□□□ -1.61
VPS61YDR136C AGE2P40529 298 aa4.99□□□□□ -1.61
VPS61YDR136C NCA3P46955 337 aa4.99□□□□□ -1.61
VPS61YDR136C YJR096WP47137 282 aa4.99□□□□□ -1.61
VPS61YDR136C YNL234WP53857 426 aa4.99□□□□□ -1.61
VPS61YDR136C SNA4Q07549 140 aa4.99□□□□□ -1.61
VPS61YDR136C MSL5Q12186 476 aaKnown RBP RIP-Chip data4.99□□□□□ -1.61not detected
VPS61YDR136C PAI3P01094 68 aa4.98□□□□□ -1.61
VPS61YDR136C ANB1P19211 157 aa4.98□□□□□ -1.61
VPS61YDR136C SUR7P54003 302 aa4.98□□□□□ -1.61
VPS61YDR136C MOT3P54785 490 aaKnown RBP4.98□□□□□ -1.61
VPS61YDR136C MGR2Q02889 113 aa4.98□□□□□ -1.61
VPS61YDR136C COX17Q12287 69 aa4.98□□□□□ -1.61
VPS61YDR136C JID1Q12350 301 aa4.98□□□□□ -1.61
VPS61YDR136C YIL102C-AQ2V2P5 75 aa4.98□□□□□ -1.61
VPS61YDR136C CPR1P14832 162 aaKnown RBP4.97□□□□□ -1.61
VPS61YDR136C SPC29P33419 253 aa4.97□□□□□ -1.61
VPS61YDR136C MRPL38P35996 138 aaPredicted RBP4.97□□□□□ -1.61
VPS61YDR136C MST28P39552 234 aa4.97□□□□□ -1.61
VPS61YDR136C YER076CP40049 302 aa4.97□□□□□ -1.61
VPS61YDR136C YKL023C-AQ2V2P3 75 aa4.97□□□□□ -1.61
VPS61YDR136C YCL048W-AQ2V2Q2 79 aa4.97□□□□□ -1.61
VPS61YDR136C CMC1P36064 111 aa4.96□□□□□ -1.62
VPS61YDR136C ECM33P38248 429 aaKnown RBP4.96□□□□□ -1.62
VPS61YDR136C MST27P53176 234 aa4.96□□□□□ -1.62
VPS61YDR136C RPL15BP54780 204 aaPredicted RBP4.96□□□□□ -1.62
VPS61YDR136C YMR103CQ04436 120 aa4.96□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 64.5 ms