RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A UTP9P38882 575 aaKnown RBP-0.38□□□□□ -2.47
TFB5YDR079C-A YAR064WP39563 99 aa-0.38□□□□□ -2.47
TFB5YDR079C-A RSM18P40033 138 aa-0.38□□□□□ -2.47
TFB5YDR079C-A YER187WP40102 141 aa-0.38□□□□□ -2.47
TFB5YDR079C-A SNL1P40548 159 aa-0.38□□□□□ -2.47
TFB5YDR079C-A YIR035CP40579 254 aa-0.38□□□□□ -2.47
TFB5YDR079C-A FMP33P46998 180 aa-0.38□□□□□ -2.47
TFB5YDR079C-A YGR149WP48236 432 aa-0.38□□□□□ -2.47
TFB5YDR079C-A RIB4P50861 169 aaPredicted RBP-0.38□□□□□ -2.47
TFB5YDR079C-A PXR1P53335 271 aaPredicted RBP-0.38□□□□□ -2.47
TFB5YDR079C-A COG5P53951 403 aa-0.38□□□□□ -2.47
TFB5YDR079C-A TIM8P57744 87 aa-0.38□□□□□ -2.47
TFB5YDR079C-A AIM11P87275 137 aa-0.38□□□□□ -2.47
TFB5YDR079C-A SPP2Q02521 185 aa-0.38□□□□□ -2.47
TFB5YDR079C-A YMD8Q03697 442 aa-0.38□□□□□ -2.47
TFB5YDR079C-A YMR114CQ04471 368 aaKnown RBP-0.38□□□□□ -2.47
TFB5YDR079C-A DPB4Q04603 196 aaKnown RBP-0.38□□□□□ -2.47
TFB5YDR079C-A SNO4Q04902 237 aa-0.38□□□□□ -2.47
TFB5YDR079C-A TMA16Q08687 178 aa-0.38□□□□□ -2.47
TFB5YDR079C-A YOR292CQ08743 309 aa-0.38□□□□□ -2.47
TFB5YDR079C-A HSP33Q08914 237 aaKnown RBP-0.38□□□□□ -2.47
TFB5YDR079C-A HSP32Q08992 237 aa-0.38□□□□□ -2.47
TFB5YDR079C-A FSF1Q12029 327 aaKnown RBP-0.38□□□□□ -2.47
TFB5YDR079C-A YPL245WQ12179 454 aaKnown RBP-0.38□□□□□ -2.47
TFB5YDR079C-A FYV7Q12247 151 aa-0.38□□□□□ -2.47
TFB5YDR079C-A YKL023C-AQ2V2P3 75 aa-0.38□□□□□ -2.47
TFB5YDR079C-A YLR361C-AQ3E795 98 aa-0.38□□□□□ -2.47
TFB5YDR079C-A COA3Q3E7B2 85 aa-0.38□□□□□ -2.47
TFB5YDR079C-A MOT1P32333 1867 aa-0.38□□□□□ -2.47
TFB5YDR079C-A YAL065CO13511 128 aa-0.39□□□□□ -2.47
TFB5YDR079C-A QCR2P07257 368 aa-0.39□□□□□ -2.47
TFB5YDR079C-A RPL27BP0C2H7 136 aaKnown RBP-0.39□□□□□ -2.47
TFB5YDR079C-A PAU19P0CE85 124 aa-0.39□□□□□ -2.47
TFB5YDR079C-A PAU21P0CE86 164 aa-0.39□□□□□ -2.47
TFB5YDR079C-A PAU22P0CE87 164 aa-0.39□□□□□ -2.47
TFB5YDR079C-A YOL163WP0CF20 169 aa-0.39□□□□□ -2.47
TFB5YDR079C-A DDI2P0CH63 225 aa-0.39□□□□□ -2.47
TFB5YDR079C-A DDI3P0CH64 225 aa-0.39□□□□□ -2.47
TFB5YDR079C-A SNF4P12904 322 aa-0.39□□□□□ -2.47
TFB5YDR079C-A CPT1P17898 393 aa-0.39□□□□□ -2.47
TFB5YDR079C-A PAU3P25610 124 aa-0.39□□□□□ -2.47
TFB5YDR079C-A BUD23P25627 275 aaPredicted RBP-0.39□□□□□ -2.47
TFB5YDR079C-A CSM1P25651 190 aa-0.39□□□□□ -2.47
TFB5YDR079C-A FPR2P32472 135 aa-0.39□□□□□ -2.47
TFB5YDR079C-A SEC17P32602 292 aa-0.39□□□□□ -2.47
TFB5YDR079C-A RPS0AP32905 252 aaKnown RBP-0.39□□□□□ -2.47
TFB5YDR079C-A RPS1AP33442 255 aaKnown RBP-0.39□□□□□ -2.47
TFB5YDR079C-A PAU16P35994 123 aa-0.39□□□□□ -2.47
TFB5YDR079C-A YBL071CP38185 102 aa-0.39□□□□□ -2.47
TFB5YDR079C-A POP8P38208 133 aa-0.39□□□□□ -2.47
TFB5YDR079C-A MED8P38304 223 aa-0.39□□□□□ -2.47
TFB5YDR079C-A EFM1P38732 585 aa-0.39□□□□□ -2.47
TFB5YDR079C-A TIR3P40552 269 aa-0.39□□□□□ -2.47
TFB5YDR079C-A PAU15P40585 124 aa-0.39□□□□□ -2.47
TFB5YDR079C-A MVB12P42939 101 aa-0.39□□□□□ -2.47
TFB5YDR079C-A OTU1P43558 301 aa-0.39□□□□□ -2.47
TFB5YDR079C-A IMP2P46972 177 aa-0.39□□□□□ -2.47
TFB5YDR079C-A TAD2P47058 250 aa-0.39□□□□□ -2.47
TFB5YDR079C-A LIA1P47120 325 aaKnown RBP-0.39□□□□□ -2.47
TFB5YDR079C-A RMR1P53060 241 aa-0.39□□□□□ -2.47
TFB5YDR079C-A MLC1P53141 149 aa-0.39□□□□□ -2.47
TFB5YDR079C-A COS6P53344 381 aa-0.39□□□□□ -2.47
TFB5YDR079C-A YNR077CP53758 84 aa-0.39□□□□□ -2.47
TFB5YDR079C-A BSC4P53841 131 aa-0.39□□□□□ -2.47
TFB5YDR079C-A PDR17P53844 350 aa-0.39□□□□□ -2.47
TFB5YDR079C-A TIM11P81449 96 aaPredicted RBP-0.39□□□□□ -2.47
TFB5YDR079C-A ABF2Q02486 183 aa-0.39□□□□□ -2.47
TFB5YDR079C-A SHR3Q02774 210 aa-0.39□□□□□ -2.47
TFB5YDR079C-A MRX11Q03079 207 aa-0.39□□□□□ -2.47
TFB5YDR079C-A DML1Q03652 475 aa-0.39□□□□□ -2.47
TFB5YDR079C-A SDH7Q04401 133 aa-0.39□□□□□ -2.47
TFB5YDR079C-A KRE28Q04431 385 aa-0.39□□□□□ -2.47
TFB5YDR079C-A MGR3Q04472 501 aa-0.39□□□□□ -2.47
TFB5YDR079C-A ERV41Q04651 352 aa-0.39□□□□□ -2.47
TFB5YDR079C-A YLR177WQ06251 628 aa-0.39□□□□□ -2.47
TFB5YDR079C-A KEI1Q06346 221 aa-0.39□□□□□ -2.47
TFB5YDR079C-A YHR007C-AQ07074 71 aa-0.39□□□□□ -2.47
TFB5YDR079C-A YDL114WQ07530 308 aa-0.39□□□□□ -2.47
TFB5YDR079C-A PAM18Q07914 168 aa-0.39□□□□□ -2.47
TFB5YDR079C-A MEU1Q07938 337 aaKnown RBP RIP-Chip data-0.39□□□□□ -2.47not detected
TFB5YDR079C-A PAU23Q07987 124 aa-0.39□□□□□ -2.47
TFB5YDR079C-A YOR072WQ08486 104 aa-0.39□□□□□ -2.47
TFB5YDR079C-A YOR186WQ08560 144 aa-0.39□□□□□ -2.47
TFB5YDR079C-A YOR385WQ08909 290 aa-0.39□□□□□ -2.47
TFB5YDR079C-A YPL261CQ08976 102 aa-0.39□□□□□ -2.47
TFB5YDR079C-A RUD3Q12234 484 aaKnown RBP-0.39□□□□□ -2.47
TFB5YDR079C-A YBR200W-AQ3E755 54 aa-0.39□□□□□ -2.47
TFB5YDR079C-A YDR246W-AQ3E763 66 aa-0.39□□□□□ -2.47
TFB5YDR079C-A YOR316C-AQ3E806 69 aa-0.39□□□□□ -2.47
TFB5YDR079C-A YBL008W-AQ3E821 79 aa-0.39□□□□□ -2.47
TFB5YDR079C-A COA2Q3E823 68 aa-0.39□□□□□ -2.47
TFB5YDR079C-A YPT6Q99260 215 aa-0.39□□□□□ -2.47
TFB5YDR079C-A YLR236CA0A023PZG4 107 aa-0.4□□□□□ -2.47
TFB5YDR079C-A YHR139C-AO13536 103 aa-0.4□□□□□ -2.47
TFB5YDR079C-A RPL36BO14455 100 aaKnown RBP-0.4□□□□□ -2.47
TFB5YDR079C-A ARG80P07249 177 aa-0.4□□□□□ -2.47
TFB5YDR079C-A DFR1P07807 211 aaKnown RBP RIP-Chip data-0.4□□□□□ -2.47not detected
TFB5YDR079C-A RPS22AP0C0W1 130 aaKnown RBP-0.4□□□□□ -2.47
TFB5YDR079C-A PAU1P0CE88 120 aa-0.4□□□□□ -2.47
TFB5YDR079C-A PAU14P0CE89 120 aa-0.4□□□□□ -2.47
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms