RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	ARO7	P32178	256 aa		3.13	□□□□□ -1.91
SIR2	YDL042C	SFK1	P35735	353 aa		3.13	□□□□□ -1.91
SIR2	YDL042C	SHG1	P38337	142 aa		3.13	□□□□□ -1.91
SIR2	YDL042C	VMA22	P38784	181 aa		3.13	□□□□□ -1.91
SIR2	YDL042C	DLS1	P40366	167 aa		3.13	□□□□□ -1.91
SIR2	YDL042C	NRK1	P53915	240 aa		3.13	□□□□□ -1.91
SIR2	YDL042C	SNO1	Q03144	224 aa		3.13	□□□□□ -1.91
SIR2	YDL042C	MAK3	Q03503	176 aa		3.13	□□□□□ -1.91
SIR2	YDL042C	GPI17	Q04080	534 aa		3.13	□□□□□ -1.91
SIR2	YDL042C	PET20	Q99373	253 aa		3.13	□□□□□ -1.91
SIR2	YDL042C	TRR1	P29509	319 aa	Known RBP	3.12	□□□□□ -1.91
SIR2	YDL042C	DER1	P38307	211 aa		3.12	□□□□□ -1.91
SIR2	YDL042C	MPD1	Q12404	318 aa	Known RBP	3.12	□□□□□ -1.91
SIR2	YDL042C	YCL048W-A	Q2V2Q2	79 aa		3.12	□□□□□ -1.91
SIR2	YDL042C	YLR099W-A	Q3E798	87 aa		3.12	□□□□□ -1.91
SIR2	YDL042C	ADK1	P07170	222 aa	Known RBP	3.11	□□□□□ -1.91
SIR2	YDL042C	GEP7	P53171	287 aa		3.11	□□□□□ -1.91
SIR2	YDL042C	BUD25	P85052	153 aa		3.11	□□□□□ -1.91
SIR2	YDL042C	YDR274C	P87283	123 aa		3.11	□□□□□ -1.91
SIR2	YDL042C	TMA20	P89886	181 aa	Predicted RBP	3.11	□□□□□ -1.91
SIR2	YDL042C	YKR005C	Q02203	525 aa		3.11	□□□□□ -1.91
SIR2	YDL042C	YMR105W-A	Q8TGS8	64 aa		3.11	□□□□□ -1.91
SIR2	YDL042C	ATP15	P21306	62 aa		3.11	□□□□□ -1.91
SIR2	YDL042C	FMP23	P38231	175 aa		3.11	□□□□□ -1.91
SIR2	YDL042C	HUT1	Q12520	339 aa		3.11	□□□□□ -1.91
SIR2	YDL042C	MRS1	P07266	363 aa		3.1	□□□□□ -1.91
SIR2	YDL042C	RPS28B	P0C0X0	67 aa	Known RBP	3.1	□□□□□ -1.91
SIR2	YDL042C	CKS1	P20486	150 aa	Known RBP	3.1	□□□□□ -1.91
SIR2	YDL042C	FZF1	P32805	299 aa		3.1	□□□□□ -1.91
SIR2	YDL042C	CIN5	P40917	295 aa		3.1	□□□□□ -1.91
SIR2	YDL042C	CSI2	Q08054	341 aa		3.1	□□□□□ -1.91
SIR2	YDL042C	FSF1	Q12029	327 aa	Known RBP	3.1	□□□□□ -1.91
SIR2	YDL042C	ATG41	Q12048	136 aa		3.1	□□□□□ -1.91
SIR2	YDL042C	RPS28A	Q3E7X9	67 aa	Predicted RBP	3.1	□□□□□ -1.91
SIR2	YDL042C	XPT1	P47165	209 aa		3.09	□□□□□ -1.91
SIR2	YDL042C	CCW14	O13547	238 aa		3.08	□□□□□ -1.92
SIR2	YDL042C	TMA19	P35691	167 aa	Known RBP	3.08	□□□□□ -1.92
SIR2	YDL042C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
SIR2	YDL042C	CCS1	P40202	249 aa	Known RBP	3.08	□□□□□ -1.92
SIR2	YDL042C	GPI14	P47088	403 aa	Known RBP	3.08	□□□□□ -1.92
SIR2	YDL042C	RBL2	P48606	106 aa	Known RBP	3.08	□□□□□ -1.92
SIR2	YDL042C	YNR064C	P53750	290 aa		3.08	□□□□□ -1.92
SIR2	YDL042C	YPL067C	Q02754	198 aa		3.08	□□□□□ -1.92
SIR2	YDL042C	HNT1	Q04344	158 aa	Known RBP	3.08	□□□□□ -1.92
SIR2	YDL042C	RIM9	Q04734	239 aa		3.08	□□□□□ -1.92
SIR2	YDL042C	KEI1	Q06346	221 aa		3.08	□□□□□ -1.92
SIR2	YDL042C	PET54	P10834	293 aa		3.07	□□□□□ -1.92
SIR2	YDL042C	CPR5	P35176	225 aa		3.07	□□□□□ -1.92
SIR2	YDL042C	GLE2	P40066	365 aa		3.07	□□□□□ -1.92
SIR2	YDL042C	MOG1	P47123	218 aa		3.07	□□□□□ -1.92
SIR2	YDL042C	DIE2	P50076	525 aa		3.07	□□□□□ -1.92
SIR2	YDL042C	JAC1	P53193	184 aa		3.07	□□□□□ -1.92
SIR2	YDL042C	UPS1	Q05776	175 aa		3.07	□□□□□ -1.92
SIR2	YDL042C	CNB1	P25296	175 aa		3.06	□□□□□ -1.92
SIR2	YDL042C	YCR101C	P25607	182 aa		3.06	□□□□□ -1.92
SIR2	YDL042C	UPS2	P35200	230 aa		3.06	□□□□□ -1.92
SIR2	YDL042C	HTD2	P38790	280 aa	Known RBP	3.06	□□□□□ -1.92
SIR2	YDL042C	NOC4	Q06512	552 aa	Predicted RBP	3.06	□□□□□ -1.92
SIR2	YDL042C	PRP11	Q07350	266 aa	Predicted RBP	3.06	□□□□□ -1.92
SIR2	YDL042C	ODC2	Q99297	307 aa		3.06	□□□□□ -1.92
SIR2	YDL042C	OCH1	P31755	480 aa		3.05	□□□□□ -1.92
SIR2	YDL042C	GNA1	P43577	159 aa	Predicted RBP	3.05	□□□□□ -1.92
SIR2	YDL042C	YPD1	Q07688	167 aa		3.05	□□□□□ -1.92
SIR2	YDL042C	YOL118C	Q08259	102 aa		3.05	□□□□□ -1.92
SIR2	YDL042C	YLR050C	Q12155	161 aa	Known RBP	3.05	□□□□□ -1.92
SIR2	YDL042C	YOR192C-C	Q3E736	78 aa		3.05	□□□□□ -1.92
SIR2	YDL042C	SUS1	Q6WNK7	96 aa		3.05	□□□□□ -1.92
SIR2	YDL042C	YBR219C	P38317	127 aa		3.04	□□□□□ -1.92
SIR2	YDL042C	HSK3	P69852	69 aa		3.04	□□□□□ -1.92
SIR2	YDL042C	MBF1	O14467	151 aa	Known RBP	3.04	□□□□□ -1.92
SIR2	YDL042C	BUD23	P25627	275 aa	Predicted RBP	3.04	□□□□□ -1.92
SIR2	YDL042C	SPT14	P32363	452 aa		3.04	□□□□□ -1.92
SIR2	YDL042C	RPB7	P34087	171 aa		3.04	□□□□□ -1.92
SIR2	YDL042C	UTP11	P34247	250 aa	Predicted RBP	3.04	□□□□□ -1.92
SIR2	YDL042C	YER137C	P40083	148 aa	Known RBP	3.04	□□□□□ -1.92
SIR2	YDL042C	YJR111C	P47148	283 aa	Known RBP	3.04	□□□□□ -1.92
SIR2	YDL042C	YLR365W	Q7LIF2	110 aa		3.04	□□□□□ -1.92
SIR2	YDL042C	ATG40	Q99325	256 aa		3.04	□□□□□ -1.92
SIR2	YDL042C	IGO2	Q9P305	131 aa		3.04	□□□□□ -1.92
SIR2	YDL042C	YBL010C	P32788	280 aa		3.03	□□□□□ -1.92
SIR2	YDL042C	YKR041W	P36134	250 aa		3.03	□□□□□ -1.92
SIR2	YDL042C	YER076C	P40049	302 aa		3.03	□□□□□ -1.92
SIR2	YDL042C	SOL1	P50278	321 aa		3.03	□□□□□ -1.92
SIR2	YDL042C	FIT1	Q04433	528 aa		3.03	□□□□□ -1.92
SIR2	YDL042C	SYM1	Q06563	197 aa		3.03	□□□□□ -1.92
SIR2	YDL042C	YOR385W	Q08909	290 aa		3.03	□□□□□ -1.92
SIR2	YDL042C	RDI1	Q12434	202 aa		3.03	□□□□□ -1.92
SIR2	YDL042C	NHP6A	P11632	93 aa	Known RBP	3.02	□□□□□ -1.93
SIR2	YDL042C	YBR209W	P38311	105 aa		3.02	□□□□□ -1.93
SIR2	YDL042C	SER2	P42941	309 aa		3.02	□□□□□ -1.93
SIR2	YDL042C	TTI2	P47168	421 aa		3.02	□□□□□ -1.93
SIR2	YDL042C	YPR108W-A	Q3E7B3	70 aa		3.02	□□□□□ -1.93
SIR2	YDL042C	SUA7	P29055	345 aa	Predicted RBP	3.01	□□□□□ -1.93
SIR2	YDL042C	IPI1	P38803	334 aa	Predicted RBP	3.01	□□□□□ -1.93
SIR2	YDL042C	HPA3	P39979	161 aa		3.01	□□□□□ -1.93
SIR2	YDL042C	ARP3	P47117	449 aa	Known RBP	3.01	□□□□□ -1.93
SIR2	YDL042C	YLR031W	Q07978	186 aa		3.01	□□□□□ -1.93
SIR2	YDL042C	DGK1	Q12382	290 aa		3.01	□□□□□ -1.93
SIR2	YDL042C	YER135C	P40082	130 aa		3.01	□□□□□ -1.93
SIR2	YDL042C	YNL184C	P53876	108 aa		3.01	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 75.4 ms