RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W FCY1Q12178 158 aa6.39□□□□□ -1.39
ABP1YCR088W CYC3P06182 269 aa6.39□□□□□ -1.39
ABP1YCR088W DDI2P0CH63 225 aa6.39□□□□□ -1.39
ABP1YCR088W DDI3P0CH64 225 aa6.39□□□□□ -1.39
ABP1YCR088W YFL068WP0CX99 160 aa6.39□□□□□ -1.39
ABP1YCR088W YLL066W-AP0CY00 160 aa6.39□□□□□ -1.39
ABP1YCR088W YLL067W-AP0CY01 160 aa6.39□□□□□ -1.39
ABP1YCR088W SDH7Q04401 133 aa6.39□□□□□ -1.39
ABP1YCR088W IRC25Q07951 179 aa6.39□□□□□ -1.39
ABP1YCR088W YCL048W-AQ2V2Q2 79 aa6.39□□□□□ -1.39
ABP1YCR088W MBB1P39534 108 aa6.38□□□□□ -1.39
ABP1YCR088W PAU7P39545 55 aa6.38□□□□□ -1.39
ABP1YCR088W SNU13P39990 126 aaKnown RBP6.38□□□□□ -1.39
ABP1YCR088W YNL046WP53956 172 aa6.38□□□□□ -1.39
ABP1YCR088W SNA4Q07549 140 aa6.38□□□□□ -1.39
ABP1YCR088W IZH3Q07959 543 aa6.38□□□□□ -1.39
ABP1YCR088W FEN2P25621 512 aaKnown RBP6.37□□□□□ -1.39
ABP1YCR088W ELF1P36053 145 aa6.37□□□□□ -1.39
ABP1YCR088W YKR070WP36151 352 aaKnown RBP6.37□□□□□ -1.39
ABP1YCR088W YER121WP40076 114 aa6.37□□□□□ -1.39
ABP1YCR088W MIC26P50087 233 aa6.37□□□□□ -1.39
ABP1YCR088W YIL014C-AQ02598 104 aa6.37□□□□□ -1.39
ABP1YCR088W VPS71Q03433 280 aa6.37□□□□□ -1.39
ABP1YCR088W DAD1Q12248 94 aa6.37□□□□□ -1.39
ABP1YCR088W YKR032WP36127 104 aa6.36□□□□□ -1.39
ABP1YCR088W FYV4P38783 130 aaPredicted RBP6.36□□□□□ -1.39
ABP1YCR088W SGN1P40561 250 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
ABP1YCR088W WWM1P43582 211 aaKnown RBP6.36□□□□□ -1.39
ABP1YCR088W YGL260WP53056 76 aa6.36□□□□□ -1.39
ABP1YCR088W JID1Q12350 301 aa6.36□□□□□ -1.39
ABP1YCR088W YIL002W-AQ3E7Z5 69 aa6.36□□□□□ -1.39
ABP1YCR088W MBF1O14467 151 aaKnown RBP6.36□□□□□ -1.39
ABP1YCR088W ADH2P00331 348 aaKnown RBP6.36□□□□□ -1.39
ABP1YCR088W SPC29P33419 253 aa6.36□□□□□ -1.39
ABP1YCR088W PRS4P38063 326 aaPredicted RBP6.36□□□□□ -1.39
ABP1YCR088W RRT1P38192 103 aa6.36□□□□□ -1.39
ABP1YCR088W YJL027CP47063 138 aaPredicted RBP6.36□□□□□ -1.39
ABP1YCR088W YGR017WP53210 297 aa6.36□□□□□ -1.39
ABP1YCR088W YDL218WQ07629 317 aa6.36□□□□□ -1.39
ABP1YCR088W RPF1P38805 295 aaKnown RBP6.35□□□□□ -1.39
ABP1YCR088W YJL163CP46996 555 aa6.35□□□□□ -1.39
ABP1YCR088W RPL15BP54780 204 aaPredicted RBP6.35□□□□□ -1.39
ABP1YCR088W GTO3Q04806 366 aa6.35□□□□□ -1.39
ABP1YCR088W BET5Q03630 159 aa6.34□□□□□ -1.39
ABP1YCR088W YLR050CQ12155 161 aaKnown RBP6.34□□□□□ -1.39
ABP1YCR088W GPP2P40106 250 aaKnown RBP6.34□□□□□ -1.4
ABP1YCR088W YGR045CP53229 120 aa6.34□□□□□ -1.4
ABP1YCR088W SAL1D6W196 494 aa6.33□□□□□ -1.4
ABP1YCR088W YLR363W-AQ3E747 85 aa6.33□□□□□ -1.4
ABP1YCR088W YIP1P53039 248 aa6.32□□□□□ -1.4
ABP1YCR088W MOT3P54785 490 aaKnown RBP6.32□□□□□ -1.4
ABP1YCR088W RUB1Q03919 77 aa6.32□□□□□ -1.4
ABP1YCR088W PBP4Q07362 185 aaKnown RBP6.32□□□□□ -1.4
ABP1YCR088W RPL12AP0CX53 165 aaKnown RBP6.31□□□□□ -1.4
ABP1YCR088W RPL12BP0CX54 165 aa6.31□□□□□ -1.4
ABP1YCR088W HEM13P11353 328 aaKnown RBP6.31□□□□□ -1.4
ABP1YCR088W PRE1P22141 198 aaKnown RBP6.31□□□□□ -1.4
ABP1YCR088W YCR023CP25351 611 aa6.31□□□□□ -1.4
ABP1YCR088W IES6P32617 166 aa6.31□□□□□ -1.4
ABP1YCR088W MRPL38P35996 138 aaPredicted RBP6.31□□□□□ -1.4
ABP1YCR088W COX17Q12287 69 aa6.31□□□□□ -1.4
ABP1YCR088W DFM1Q12743 341 aaKnown RBP6.31□□□□□ -1.4
ABP1YCR088W GPI18P38211 433 aa6.31□□□□□ -1.4
ABP1YCR088W COX16P47081 118 aa6.31□□□□□ -1.4
ABP1YCR088W YJR096WP47137 282 aa6.31□□□□□ -1.4
ABP1YCR088W YDR042CQ03205 200 aa6.31□□□□□ -1.4
ABP1YCR088W GCN1P33892 2672 aaKnown RBP6.3□□□□□ -1.4
ABP1YCR088W RPL27AP0C2H6 136 aaKnown RBP6.3□□□□□ -1.4
ABP1YCR088W MRP49P32388 137 aa6.3□□□□□ -1.4
ABP1YCR088W YNL198CP40166 100 aa6.3□□□□□ -1.4
ABP1YCR088W YIL012WP40551 113 aa6.3□□□□□ -1.4
ABP1YCR088W YGR025WP53216 100 aa6.3□□□□□ -1.4
ABP1YCR088W CAB4P53332 305 aa6.3□□□□□ -1.4
ABP1YCR088W PRY2P36110 329 aa6.29□□□□□ -1.4
ABP1YCR088W NCA3P46955 337 aa6.29□□□□□ -1.4
ABP1YCR088W GPI19Q04082 140 aa6.29□□□□□ -1.4
ABP1YCR088W YOL160WQ08321 113 aa6.29□□□□□ -1.4
ABP1YCR088W YLR342W-AQ3E810 57 aa6.29□□□□□ -1.4
ABP1YCR088W HTL1Q9URQ5 78 aa6.29□□□□□ -1.4
ABP1YCR088W SPS100P13130 326 aa6.29□□□□□ -1.4
ABP1YCR088W MRPL20P22354 195 aaPredicted RBP6.29□□□□□ -1.4
ABP1YCR088W APS1P35181 156 aa6.29□□□□□ -1.4
ABP1YCR088W MST27P53176 234 aa6.29□□□□□ -1.4
ABP1YCR088W DGA1Q08650 418 aa6.29□□□□□ -1.4
ABP1YCR088W YBR056W-AI2HB52 66 aa6.28□□□□□ -1.4
ABP1YCR088W LCB3P47013 409 aa6.28□□□□□ -1.4
ABP1YCR088W GEP3Q08622 556 aa6.28□□□□□ -1.4
ABP1YCR088W RPL27BP0C2H7 136 aaKnown RBP6.27□□□□□ -1.41
ABP1YCR088W UBC7Q02159 165 aa6.27□□□□□ -1.41
ABP1YCR088W ATG39Q06159 398 aa6.27□□□□□ -1.41
ABP1YCR088W YPL278CQ08990 100 aa6.27□□□□□ -1.41
ABP1YCR088W YHR140WP38842 239 aa6.26□□□□□ -1.41
ABP1YCR088W YMR103CQ04436 120 aa6.26□□□□□ -1.41
ABP1YCR088W AQY1P0CD91 305 aa6.26□□□□□ -1.41
ABP1YCR088W SUT1P53032 299 aaKnown RBP6.26□□□□□ -1.41
ABP1YCR088W MGR2Q02889 113 aa6.26□□□□□ -1.41
ABP1YCR088W ADH6Q04894 360 aaKnown RBP6.26□□□□□ -1.41
ABP1YCR088W TIM22Q12328 207 aa6.26□□□□□ -1.41
ABP1YCR088W UTP23Q12339 254 aaKnown RBP6.26□□□□□ -1.41
ABP1YCR088W AGE2P40529 298 aa6.25□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 57 ms