RNA–Protein interactions for RNA: YCR004C

YCP4, Transcript of Protein of unknown function, yeastyeast

Gene YCP4, Length 744 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCP4YCR004C ORM2Q06144 216 aa5.69□□□□□ -1.5
YCP4YCR004C SDO1Q07953 250 aaKnown RBP5.69□□□□□ -1.5
YCP4YCR004C YBR200W-AQ3E755 54 aa5.69□□□□□ -1.5
YCP4YCR004C RRT15Q3E811 62 aa5.69□□□□□ -1.5
YCP4YCR004C YJL197C-AP0C5P0 93 aa5.68□□□□□ -1.5
YCP4YCR004C RNA15P25299 296 aaPredicted RBP5.68□□□□□ -1.5
YCP4YCR004C AGA1P32323 725 aa5.68□□□□□ -1.5
YCP4YCR004C HMX1P32339 317 aa5.68□□□□□ -1.5
YCP4YCR004C RPS0AP32905 252 aaKnown RBP5.68□□□□□ -1.5
YCP4YCR004C YOR015WQ12169 119 aa5.68□□□□□ -1.5
YCP4YCR004C DFM1Q12743 341 aaKnown RBP5.68□□□□□ -1.5
YCP4YCR004C RPL33AP05744 107 aaKnown RBP5.67□□□□□ -1.5
YCP4YCR004C RPL33BP41056 107 aaKnown RBP5.67□□□□□ -1.5
YCP4YCR004C DIA1P54005 336 aa5.67□□□□□ -1.5
YCP4YCR004C UTP23Q12339 254 aaKnown RBP5.67□□□□□ -1.5
YCP4YCR004C DIF1O13577 133 aa5.66□□□□□ -1.5
YCP4YCR004C UBI4P0CG63 381 aaKnown RBP5.66□□□□□ -1.5
YCP4YCR004C SAR1P20606 190 aaKnown RBP5.66□□□□□ -1.5
YCP4YCR004C POG1P40473 351 aa5.66□□□□□ -1.5
YCP4YCR004C SRB7P47822 140 aa5.66□□□□□ -1.5
YCP4YCR004C ERI1P62651 68 aaKnown RBP5.66□□□□□ -1.5
YCP4YCR004C DGA1Q08650 418 aa5.66□□□□□ -1.5
YCP4YCR004C YPT10P38146 199 aa5.65□□□□□ -1.5
YCP4YCR004C SUR2P38992 349 aa5.65□□□□□ -1.5
YCP4YCR004C TAD2P47058 250 aa5.65□□□□□ -1.5
YCP4YCR004C YCL001W-AP87012 153 aa5.65□□□□□ -1.5
YCP4YCR004C ANT1Q06497 328 aa5.65□□□□□ -1.5
YCP4YCR004C PCC1Q3E833 88 aa5.65□□□□□ -1.5
YCP4YCR004C SMD3P43321 101 aaKnown RBP5.64□□□□□ -1.51
YCP4YCR004C FCF1Q05498 189 aaPredicted RBP5.64□□□□□ -1.51
YCP4YCR004C YLR042CQ07990 161 aa5.64□□□□□ -1.51
YCP4YCR004C TIM22Q12328 207 aa5.64□□□□□ -1.51
YCP4YCR004C SME1Q12330 94 aaPredicted RBP5.64□□□□□ -1.51
YCP4YCR004C YPR010C-AA5Z2X5 72 aa5.63□□□□□ -1.51
YCP4YCR004C YBR013CP38215 129 aa5.63□□□□□ -1.51
YCP4YCR004C LOC1P43586 204 aaPredicted RBP5.63□□□□□ -1.51
YCP4YCR004C TIM21P53220 239 aa5.63□□□□□ -1.51
YCP4YCR004C ADD37Q03233 198 aa5.63□□□□□ -1.51
YCP4YCR004C UPS3Q04006 179 aa5.63□□□□□ -1.51
YCP4YCR004C YAR023CD6VPM8 179 aa5.62□□□□□ -1.51
YCP4YCR004C YCR023CP25351 611 aa5.62□□□□□ -1.51
YCP4YCR004C TEM1P38987 245 aa5.62□□□□□ -1.51
YCP4YCR004C MIX23P38162 196 aa5.61□□□□□ -1.51
YCP4YCR004C GCV3P39726 170 aaPredicted RBP5.61□□□□□ -1.51
YCP4YCR004C YGL185CP53100 379 aa5.61□□□□□ -1.51
YCP4YCR004C YGR017WP53210 297 aa5.61□□□□□ -1.51
YCP4YCR004C PMP3P87284 55 aa5.61□□□□□ -1.51
YCP4YCR004C YGL194C-AQ2V2P6 80 aa5.61□□□□□ -1.51
YCP4YCR004C RPL12AP0CX53 165 aaKnown RBP5.6□□□□□ -1.51
YCP4YCR004C RPL12BP0CX54 165 aa5.6□□□□□ -1.51
YCP4YCR004C RPL14AP36105 138 aaKnown RBP5.6□□□□□ -1.51
YCP4YCR004C RPL14BP38754 138 aaKnown RBP5.6□□□□□ -1.51
YCP4YCR004C YIL163CP40448 117 aa5.6□□□□□ -1.51
YCP4YCR004C YDR115WQ04598 105 aa5.6□□□□□ -1.51
YCP4YCR004C MED7Q08278 222 aa5.6□□□□□ -1.51
YCP4YCR004C POF1P25576 258 aa5.59□□□□□ -1.51
YCP4YCR004C YFR045WP43617 309 aa5.59□□□□□ -1.51
YCP4YCR004C PAU4P53427 120 aa5.59□□□□□ -1.51
YCP4YCR004C YOR105WQ08504 108 aa5.59□□□□□ -1.51
YCP4YCR004C BET5Q03630 159 aa5.58□□□□□ -1.52
YCP4YCR004C YMR320WQ04897 101 aa5.58□□□□□ -1.52
YCP4YCR004C YGR026WP53217 278 aa5.57□□□□□ -1.52
YCP4YCR004C LCL1Q02786 101 aa5.57□□□□□ -1.52
YCP4YCR004C YMR122W-AQ3E842 84 aa5.57□□□□□ -1.52
YCP4YCR004C PAU1P0CE88 120 aa5.56□□□□□ -1.52
YCP4YCR004C PAU14P0CE89 120 aa5.56□□□□□ -1.52
YCP4YCR004C PAU6P0CE90 120 aa5.56□□□□□ -1.52
YCP4YCR004C PAU18P0CE91 120 aa5.56□□□□□ -1.52
YCP4YCR004C PAU8P0CE92 120 aa5.56□□□□□ -1.52
YCP4YCR004C PAU11P0CE93 120 aa5.56□□□□□ -1.52
YCP4YCR004C PAU13P38725 120 aa5.56□□□□□ -1.52
YCP4YCR004C CYB5P40312 120 aa5.56□□□□□ -1.52
YCP4YCR004C JAC1P53193 184 aa5.56□□□□□ -1.52
YCP4YCR004C PAU10Q03050 120 aa5.56□□□□□ -1.52
YCP4YCR004C DXO1Q06349 442 aa5.56□□□□□ -1.52
YCP4YCR004C PAU20Q08322 120 aa5.56□□□□□ -1.52
YCP4YCR004C PAU9Q3E770 120 aa5.56□□□□□ -1.52
YCP4YCR004C RPS22AP0C0W1 130 aaKnown RBP5.55□□□□□ -1.52
YCP4YCR004C UBC5P15732 148 aa5.55□□□□□ -1.52
YCP4YCR004C FZF1P32805 299 aa5.55□□□□□ -1.52
YCP4YCR004C ATG33Q06485 197 aa5.55□□□□□ -1.52
YCP4YCR004C SEC59P20048 519 aa5.54□□□□□ -1.52
YCP4YCR004C SPC25P40014 221 aa5.54□□□□□ -1.52
YCP4YCR004C PGD1P40356 397 aa5.54□□□□□ -1.52
YCP4YCR004C ARC15P40518 154 aaRIP-Chip data5.54□□□□□ -1.52not detected
YCP4YCR004C ATP19P81451 68 aa5.54□□□□□ -1.52
YCP4YCR004C YDR029WQ12111 104 aa5.54□□□□□ -1.52
YCP4YCR004C YLR307C-AQ3E825 87 aa5.54□□□□□ -1.52
YCP4YCR004C SHG1P38337 142 aa5.53□□□□□ -1.52
YCP4YCR004C MMS2P53152 137 aa5.52□□□□□ -1.53
YCP4YCR004C CSM4Q08955 156 aa5.52□□□□□ -1.53
YCP4YCR004C COX19Q3E731 98 aa5.52□□□□□ -1.53
YCP4YCR004C YBR085C-AO43137 85 aa5.51□□□□□ -1.53
YCP4YCR004C FRS1P15624 595 aaKnown RBP5.51□□□□□ -1.53
YCP4YCR004C RPL16AP26784 199 aaKnown RBP5.51□□□□□ -1.53
YCP4YCR004C YBR090CP38253 122 aa5.51□□□□□ -1.53
YCP4YCR004C YHR140WP38842 239 aa5.51□□□□□ -1.53
YCP4YCR004C RIB5P38145 238 aa5.5□□□□□ -1.53
YCP4YCR004C ERG28P40030 148 aa5.5□□□□□ -1.53
YCP4YCR004C YIL059CP40520 121 aa5.5□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 142.5 ms