RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C TIM18Q08749 192 aa5.55□□□□□ -1.52
TDP1YBR223C YPL162CQ12042 273 aa5.55□□□□□ -1.52
TDP1YBR223C FEN2P25621 512 aaKnown RBP5.54□□□□□ -1.52
TDP1YBR223C SBH2P52871 88 aa5.54□□□□□ -1.52
TDP1YBR223C YGL230CP53074 147 aa5.54□□□□□ -1.52
TDP1YBR223C SWT21P53873 357 aaPredicted RBP5.54□□□□□ -1.52
TDP1YBR223C UBC7Q02159 165 aa5.54□□□□□ -1.52
TDP1YBR223C SCS22Q6Q595 175 aa5.54□□□□□ -1.52
TDP1YBR223C SEC11P15367 167 aa5.53□□□□□ -1.52
TDP1YBR223C MTR2P34232 184 aaKnown RBP5.53□□□□□ -1.52
TDP1YBR223C PRS4P38063 326 aaPredicted RBP5.53□□□□□ -1.52
TDP1YBR223C SNU13P39990 126 aaKnown RBP5.53□□□□□ -1.52
TDP1YBR223C MSL1P40567 111 aaPredicted RBP5.53□□□□□ -1.52
TDP1YBR223C YPI1P43587 155 aa5.53□□□□□ -1.52
TDP1YBR223C YJL027CP47063 138 aaPredicted RBP5.53□□□□□ -1.52
TDP1YBR223C POP3P53833 195 aaPredicted RBP5.53□□□□□ -1.52
TDP1YBR223C HTL1Q9URQ5 78 aa5.53□□□□□ -1.52
TDP1YBR223C YFL068WP0CX99 160 aa5.52□□□□□ -1.53
TDP1YBR223C YLL066W-AP0CY00 160 aa5.52□□□□□ -1.53
TDP1YBR223C YLL067W-AP0CY01 160 aa5.52□□□□□ -1.53
TDP1YBR223C UTR5P32630 166 aa5.52□□□□□ -1.53
TDP1YBR223C PRE3P38624 215 aa5.52□□□□□ -1.53
TDP1YBR223C COX16P47081 118 aa5.52□□□□□ -1.53
TDP1YBR223C YGR017WP53210 297 aa5.52□□□□□ -1.53
TDP1YBR223C CWC27Q02770 301 aa5.52□□□□□ -1.53
TDP1YBR223C TVP18Q04767 167 aa5.52□□□□□ -1.53
TDP1YBR223C DPP1Q05521 289 aa5.52□□□□□ -1.53
TDP1YBR223C PBP4Q07362 185 aaKnown RBP5.52□□□□□ -1.53
TDP1YBR223C TIM10P87108 93 aa5.52□□□□□ -1.53
TDP1YBR223C UPS3Q04006 179 aa5.52□□□□□ -1.53
TDP1YBR223C TMA7Q3E764 64 aaKnown RBP5.52□□□□□ -1.53
TDP1YBR223C YLR342W-AQ3E810 57 aa5.52□□□□□ -1.53
TDP1YBR223C RPL27AP0C2H6 136 aaKnown RBP5.51□□□□□ -1.53
TDP1YBR223C YHL044WP38727 235 aa5.51□□□□□ -1.53
TDP1YBR223C GLE2P40066 365 aa5.51□□□□□ -1.53
TDP1YBR223C GPP2P40106 250 aaKnown RBP5.51□□□□□ -1.53
TDP1YBR223C GRH1Q04410 372 aaKnown RBP5.51□□□□□ -1.53
TDP1YBR223C YLR050CQ12155 161 aaKnown RBP5.51□□□□□ -1.53
TDP1YBR223C NCA3P46955 337 aa5.5□□□□□ -1.53
TDP1YBR223C BNA1P47096 177 aa5.5□□□□□ -1.53
TDP1YBR223C MST27P53176 234 aa5.5□□□□□ -1.53
TDP1YBR223C RPL15BP54780 204 aaPredicted RBP5.5□□□□□ -1.53
TDP1YBR223C TMC1Q08422 150 aaPredicted RBP5.5□□□□□ -1.53
TDP1YBR223C UTP23Q12339 254 aaKnown RBP5.5□□□□□ -1.53
TDP1YBR223C CPT1P17898 393 aa5.49□□□□□ -1.53
TDP1YBR223C VMA16P23968 213 aa5.49□□□□□ -1.53
TDP1YBR223C FYV4P38783 130 aaPredicted RBP5.49□□□□□ -1.53
TDP1YBR223C SUT1P53032 299 aaKnown RBP5.49□□□□□ -1.53
TDP1YBR223C POR2P40478 281 aa5.48□□□□□ -1.53
TDP1YBR223C YIR020CP40575 100 aa5.48□□□□□ -1.53
TDP1YBR223C MIC26P50087 233 aa5.48□□□□□ -1.53
TDP1YBR223C YDR366CP87287 132 aa5.48□□□□□ -1.53
TDP1YBR223C GPI19Q04082 140 aa5.48□□□□□ -1.53
TDP1YBR223C RPL12AP0CX53 165 aaKnown RBP5.48□□□□□ -1.53
TDP1YBR223C RPL12BP0CX54 165 aa5.48□□□□□ -1.53
TDP1YBR223C ERS1P17261 260 aa5.48□□□□□ -1.53
TDP1YBR223C YKR070WP36151 352 aaKnown RBP5.48□□□□□ -1.53
TDP1YBR223C WWM1P43582 211 aaKnown RBP5.48□□□□□ -1.53
TDP1YBR223C YIL014C-AQ02598 104 aa5.48□□□□□ -1.53
TDP1YBR223C YKR032WP36127 104 aa5.47□□□□□ -1.53
TDP1YBR223C YHR140WP38842 239 aa5.47□□□□□ -1.53
TDP1YBR223C PET8P38921 284 aa5.47□□□□□ -1.53
TDP1YBR223C VPS71Q03433 280 aa5.47□□□□□ -1.53
TDP1YBR223C GEP3Q08622 556 aa5.47□□□□□ -1.53
TDP1YBR223C RDL1Q12305 139 aaKnown RBP5.47□□□□□ -1.53
TDP1YBR223C TIM22Q12328 207 aa5.47□□□□□ -1.53
TDP1YBR223C APS1P35181 156 aa5.46□□□□□ -1.54
TDP1YBR223C YJR096WP47137 282 aa5.46□□□□□ -1.54
TDP1YBR223C DIA1P54005 336 aa5.46□□□□□ -1.54
TDP1YBR223C BET5Q03630 159 aa5.46□□□□□ -1.54
TDP1YBR223C ATG39Q06159 398 aa5.46□□□□□ -1.54
TDP1YBR223C YOL160WQ08321 113 aa5.46□□□□□ -1.54
TDP1YBR223C GCN1P33892 2672 aaKnown RBP5.46□□□□□ -1.54
TDP1YBR223C RPL27BP0C2H7 136 aaKnown RBP5.45□□□□□ -1.54
TDP1YBR223C YCR023CP25351 611 aa5.45□□□□□ -1.54
TDP1YBR223C CMC1P36064 111 aa5.45□□□□□ -1.54
TDP1YBR223C YER188WP40103 239 aa5.45□□□□□ -1.54
TDP1YBR223C YIL012WP40551 113 aa5.45□□□□□ -1.54
TDP1YBR223C YGR219WP53307 113 aa5.45□□□□□ -1.54
TDP1YBR223C YLR363W-AQ3E747 85 aa5.45□□□□□ -1.54
TDP1YBR223C SPO24Q3E752 67 aa5.45□□□□□ -1.54
TDP1YBR223C YBR056W-AI2HB52 66 aa5.45□□□□□ -1.54
TDP1YBR223C VMA11P32842 164 aa5.45□□□□□ -1.54
TDP1YBR223C SNF11P38956 169 aa5.45□□□□□ -1.54
TDP1YBR223C CAB4P53332 305 aa5.45□□□□□ -1.54
TDP1YBR223C YDR042CQ03205 200 aa5.45□□□□□ -1.54
TDP1YBR223C RPF1P38805 295 aaKnown RBP5.44□□□□□ -1.54
TDP1YBR223C LCB3P47013 409 aa5.44□□□□□ -1.54
TDP1YBR223C ABM1P47146 123 aa5.44□□□□□ -1.54
TDP1YBR223C YMR181CQ03231 154 aa5.44□□□□□ -1.54
TDP1YBR223C YML079WQ03629 201 aa5.44□□□□□ -1.54
TDP1YBR223C MRP49P32388 137 aa5.43□□□□□ -1.54
TDP1YBR223C MIC12P38341 106 aa5.43□□□□□ -1.54
TDP1YBR223C YPR170W-BP0C5R9 85 aa5.42□□□□□ -1.54
TDP1YBR223C YKL044WP36092 106 aa5.42□□□□□ -1.54
TDP1YBR223C YER076CP40049 302 aa5.42□□□□□ -1.54
TDP1YBR223C NCE103P53615 221 aa5.42□□□□□ -1.54
TDP1YBR223C ATP23P53722 227 aa5.42□□□□□ -1.54
TDP1YBR223C PRE1P22141 198 aaKnown RBP5.41□□□□□ -1.54
TDP1YBR223C MOT3P54785 490 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms