RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 ACLYP53396 1101 aa19.49■□□□□ 0.71
PCDHB2-202ENST00000622947 SKIDA1Q1XH10 827 aa19.49■□□□□ 0.71
PCDHB2-202ENST00000622947 PPP1R26Q5T8A7 1209 aaPredicted RBP19.49■□□□□ 0.71
PCDHB2-202ENST00000622947 XYLT1Q86Y38 959 aa19.49■□□□□ 0.71
PCDHB2-202ENST00000622947 SLC13A5Q86YT5 568 aaPredicted RBP19.49■□□□□ 0.71
PCDHB2-202ENST00000622947 JOSD2Q8TAC2 188 aa19.49■□□□□ 0.71
PCDHB2-202ENST00000622947 RAET1EQ8TD07 263 aa19.49■□□□□ 0.71
PCDHB2-202ENST00000622947 PPP1R10Q96QC0 940 aaKnown RBP19.49■□□□□ 0.71
PCDHB2-202ENST00000622947 MIOSQ9NXC5 875 aa19.49■□□□□ 0.71
PCDHB2-202ENST00000622947 TSPAN16Q9UKR8 245 aa19.49■□□□□ 0.71
PCDHB2-202ENST00000622947 HPCAL4Q9UM19 191 aa19.49■□□□□ 0.71
PCDHB2-202ENST00000622947 CD4P01730 458 aa19.48■□□□□ 0.71
PCDHB2-202ENST00000622947 CD52P31358 61 aa19.48■□□□□ 0.71
PCDHB2-202ENST00000622947 RFC1P35251 1148 aaPredicted RBP19.48■□□□□ 0.71
PCDHB2-202ENST00000622947 IRAK1P51617 712 aa19.48■□□□□ 0.71
PCDHB2-202ENST00000622947 PDCLQ13371 301 aa19.48■□□□□ 0.71
PCDHB2-202ENST00000622947 TRIM71Q2Q1W2 868 aaKnown RBP19.48■□□□□ 0.71
PCDHB2-202ENST00000622947 ATP13A4Q4VNC1 1196 aa19.48■□□□□ 0.71
PCDHB2-202ENST00000622947 SEL1L2Q5TEA6 688 aa19.48■□□□□ 0.71
PCDHB2-202ENST00000622947 LHX8Q68G74 356 aa19.48■□□□□ 0.71
PCDHB2-202ENST00000622947 LCLAT1Q6UWP7 414 aa19.48■□□□□ 0.71
PCDHB2-202ENST00000622947 PCSK9Q8NBP7 692 aaKnown RBP19.48■□□□□ 0.71
PCDHB2-202ENST00000622947 PADI3Q9ULW8 664 aa19.48■□□□□ 0.71
PCDHB2-202ENST00000622947 NFU1Q9UMS0 254 aa19.48■□□□□ 0.71
PCDHB2-202ENST00000622947 ATXN2Q99700 1313 aaKnown RBP19.48■□□□□ 0.71
PCDHB2-202ENST00000622947 KPNA7A9QM74 516 aa19.48■□□□□ 0.71
PCDHB2-202ENST00000622947 GOLGA8SH3BPF8 625 aa19.48■□□□□ 0.71
PCDHB2-202ENST00000622947 FAM153BP0C7A2 387 aa19.48■□□□□ 0.71
PCDHB2-202ENST00000622947 RARAP10276 462 aa19.48■□□□□ 0.71
PCDHB2-202ENST00000622947 GHRP10912 638 aa19.48■□□□□ 0.71
PCDHB2-202ENST00000622947 LMO2P25791 158 aa19.48■□□□□ 0.71
PCDHB2-202ENST00000622947 HOXD10P28358 340 aa19.48■□□□□ 0.71
PCDHB2-202ENST00000622947 FAM153CQ494X1 144 aa19.48■□□□□ 0.71
PCDHB2-202ENST00000622947 TTC27Q6P3X3 843 aa19.48■□□□□ 0.71
PCDHB2-202ENST00000622947 DDX42Q86XP3 938 aaKnown RBP eCLIP19.48■□□□□ 0.71
PCDHB2-202ENST00000622947 C18orf8Q96DM3 657 aa19.48■□□□□ 0.71
PCDHB2-202ENST00000622947 NAP1L3Q99457 506 aaPredicted RBP19.48■□□□□ 0.71
PCDHB2-202ENST00000622947 SLITRK6Q9H5Y7 841 aa19.48■□□□□ 0.71
PCDHB2-202ENST00000622947 FAM124BQ9H5Z6 455 aaPredicted RBP19.48■□□□□ 0.71
PCDHB2-202ENST00000622947 FAM153AQ9UHL3 310 aa19.48■□□□□ 0.71
PCDHB2-202ENST00000622947 PIK3R2O00459 728 aa19.47■□□□□ 0.71
PCDHB2-202ENST00000622947 ECHS1P30084 290 aa19.47■□□□□ 0.71
PCDHB2-202ENST00000622947 MLH1P40692 756 aa19.47■□□□□ 0.71
PCDHB2-202ENST00000622947 PKDCCQ504Y2 493 aa19.47■□□□□ 0.71
PCDHB2-202ENST00000622947 TXNRD3NBQ6F5E7 133 aa19.47■□□□□ 0.71
PCDHB2-202ENST00000622947 LIMS2Q7Z4I7 341 aa19.47■□□□□ 0.71
PCDHB2-202ENST00000622947 TTC30AQ86WT1 665 aa19.47■□□□□ 0.71
PCDHB2-202ENST00000622947 IFT20Q8IY31 132 aa19.47■□□□□ 0.71
PCDHB2-202ENST00000622947 FAM76AQ8TAV0 307 aa19.47■□□□□ 0.71
PCDHB2-202ENST00000622947 PXYLP1Q8TE99 480 aa19.47■□□□□ 0.71
PCDHB2-202ENST00000622947 IFT81Q8WYA0 676 aa19.47■□□□□ 0.71
PCDHB2-202ENST00000622947 GAD1Q99259 594 aa19.47■□□□□ 0.71
PCDHB2-202ENST00000622947 FAM49BQ9NUQ9 324 aa19.47■□□□□ 0.71
PCDHB2-202ENST00000622947 IP6K2Q9UHH9 426 aa19.47■□□□□ 0.71
PCDHB2-202ENST00000622947 FRMPD3Q5JV73 1810 aa19.47■□□□□ 0.71
PCDHB2-202ENST00000622947 INHAP05111 366 aa19.47■□□□□ 0.71
PCDHB2-202ENST00000622947 MAN1A1P33908 653 aa19.47■□□□□ 0.71
PCDHB2-202ENST00000622947 GABRB2P47870 512 aa19.47■□□□□ 0.71
PCDHB2-202ENST00000622947 LILRA4P59901 499 aa19.47■□□□□ 0.71
PCDHB2-202ENST00000622947 PSMC1P62191 440 aaKnown RBP19.47■□□□□ 0.71
PCDHB2-202ENST00000622947 LPIN1Q14693 890 aa19.47■□□□□ 0.71
PCDHB2-202ENST00000622947 DCUN1D2Q6PH85 259 aa19.47■□□□□ 0.71
PCDHB2-202ENST00000622947 AGMOQ6ZNB7 445 aa19.47■□□□□ 0.71
PCDHB2-202ENST00000622947 RNF180Q86T96 592 aa19.47■□□□□ 0.71
PCDHB2-202ENST00000622947 ARFGAP1Q8N6T3 406 aa19.47■□□□□ 0.71
PCDHB2-202ENST00000622947 OR6B3Q8NGW1 331 aa19.47■□□□□ 0.71
PCDHB2-202ENST00000622947 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.47■□□□□ 0.71
PCDHB2-202ENST00000622947 PIWIL1Q96J94 861 aaKnown RBP19.47■□□□□ 0.71
PCDHB2-202ENST00000622947 GDAP2Q9NXN4 497 aa19.47■□□□□ 0.71
PCDHB2-202ENST00000622947 SIGLEC16A6NMB1 481 aa19.46■□□□□ 0.71
PCDHB2-202ENST00000622947 GABBR2O75899 941 aa19.46■□□□□ 0.71
PCDHB2-202ENST00000622947 TTC39CQ8N584 583 aa19.46■□□□□ 0.71
PCDHB2-202ENST00000622947 EMC1Q8N766 993 aa19.46■□□□□ 0.71
PCDHB2-202ENST00000622947 TRIM51Q9BSJ1 452 aa19.46■□□□□ 0.71
PCDHB2-202ENST00000622947 CHST12Q9NRB3 414 aa19.46■□□□□ 0.71
PCDHB2-202ENST00000622947 MCM8Q9UJA3 840 aa19.46■□□□□ 0.71
PCDHB2-202ENST00000622947 STRIP2Q9ULQ0 834 aa19.46■□□□□ 0.71
PCDHB2-202ENST00000622947 FSCN2O14926 492 aa19.45■□□□□ 0.7
PCDHB2-202ENST00000622947 PDGFRBP09619 1106 aa19.45■□□□□ 0.7
PCDHB2-202ENST00000622947 CALRP27797 417 aaKnown RBP19.45■□□□□ 0.7
PCDHB2-202ENST00000622947 LRPAP1P30533 357 aa19.45■□□□□ 0.7
PCDHB2-202ENST00000622947 ELF1P32519 619 aa19.45■□□□□ 0.7
PCDHB2-202ENST00000622947 GJC1P36383 396 aa19.45■□□□□ 0.7
PCDHB2-202ENST00000622947 GOLGA7BQ2TAP0 167 aa19.45■□□□□ 0.7
PCDHB2-202ENST00000622947 RHOT1Q8IXI2 618 aa19.45■□□□□ 0.7
PCDHB2-202ENST00000622947 MIEF2Q96C03 454 aa19.45■□□□□ 0.7
PCDHB2-202ENST00000622947 TSPAN18Q96SJ8 248 aa19.45■□□□□ 0.7
PCDHB2-202ENST00000622947 KLHL11Q9NVR0 708 aa19.45■□□□□ 0.7
PCDHB2-202ENST00000622947 KIAA1257Q9ULG3 409 aa19.45■□□□□ 0.7
PCDHB2-202ENST00000622947 PSTPIP1O43586 416 aa19.45■□□□□ 0.7
PCDHB2-202ENST00000622947 KRT3P12035 628 aa19.45■□□□□ 0.7
PCDHB2-202ENST00000622947 ATF7P17544 494 aaPredicted RBP19.45■□□□□ 0.7
PCDHB2-202ENST00000622947 PTGIRP43119 386 aa19.45■□□□□ 0.7
PCDHB2-202ENST00000622947 TAF6P49848 677 aa19.45■□□□□ 0.7
PCDHB2-202ENST00000622947 EPHB4P54760 987 aa19.45■□□□□ 0.7
PCDHB2-202ENST00000622947 CCDC142Q17RM4 750 aa19.45■□□□□ 0.7
PCDHB2-202ENST00000622947 PMF1Q6P1K2 205 aa19.45■□□□□ 0.7
PCDHB2-202ENST00000622947 ZNF296Q8WUU4 475 aaPredicted RBP19.45■□□□□ 0.7
PCDHB2-202ENST00000622947 MCRS1Q96EZ8 462 aa19.45■□□□□ 0.7
PCDHB2-202ENST00000622947 NEUROG2Q9H2A3 272 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms