RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 MAGED2Q9UNF1 606 aaPredicted RBP8.44□□□□□ -1.06
CLK1-215ENST00000621181 WDFY3Q8IZQ1 3526 aa8.44□□□□□ -1.06
CLK1-215ENST00000621181 TSC2P49815 1807 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 ABCA7Q8IZY2 2146 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 A0A0B4J269 797 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 VWA3AA6NCI4 1184 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 TULP1O00294 542 aaPredicted RBP8.43□□□□□ -1.06
CLK1-215ENST00000621181 CYB561D2O14569 222 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 CAVIN2O95810 425 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 PROS1P07225 676 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 ARSAP15289 507 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 SYT1P21579 422 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 DDX6P26196 483 aaKnown RBP eCLIP8.43□□□□□ -1.06
CLK1-215ENST00000621181 NLRP12P59046 1061 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 HYIQ5T013 277 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 DAB2IPQ5VWQ8 1189 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 WSCD1Q658N2 575 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 LRRTM3Q86VH5 581 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 KCTD17Q8N5Z5 321 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 MYCT1Q8N699 235 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 ACDQ96AP0 544 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 CHFRQ96EP1 664 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 DUSP15Q9H1R2 295 aaPredicted RBP8.43□□□□□ -1.06
CLK1-215ENST00000621181 ZHX3Q9H4I2 956 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 CPSF3Q9UKF6 684 aaKnown RBP8.43□□□□□ -1.06
CLK1-215ENST00000621181 MTMR6Q9Y217 621 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 DENND4CQ5VZ89 1909 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 BAHCC1Q9P281 2608 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 LNP1A1A4G5 178 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 ANO9A1A5B4 782 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 C4orf47A7E2U8 309 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 PIRO00625 290 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 DCLK1O15075 740 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 ZNF500O60304 480 aaPredicted RBP8.43□□□□□ -1.06
CLK1-215ENST00000621181 FAM13AO94988 1023 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 APBB3O95704 486 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 ADRB2P07550 413 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 CSH1P0DML2 217 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 CSH2P0DML3 217 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 HAPLN1P10915 354 aaPredicted RBP8.43□□□□□ -1.06
CLK1-215ENST00000621181 SCP2P22307 547 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 ACOT2P49753 483 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 TAF6P49848 677 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 GALK1P51570 392 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 DGKEP52429 567 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 DHX8Q14562 1220 aaKnown RBP8.43□□□□□ -1.06
CLK1-215ENST00000621181 DMC1Q14565 340 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 PDGFRLQ15198 375 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 RILPL1Q5EBL4 403 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 UNQ6494/PRO21346Q6UXR6 183 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 SYT13Q7L8C5 426 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 TMEM150AQ86TG1 271 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 DCP1BQ8IZD4 617 aaKnown RBP8.43□□□□□ -1.06
CLK1-215ENST00000621181 CPA6Q8N4T0 437 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 ATP2A3Q93084 1043 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 PNMA5Q96PV4 448 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 REEP2Q9BRK0 252 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 PARVGQ9HBI0 331 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 FBRSL1Q9HCM7 1045 aaKnown RBP8.43□□□□□ -1.06
CLK1-215ENST00000621181 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.43□□□□□ -1.06
CLK1-215ENST00000621181 SH2B1Q9NRF2 756 aaPredicted RBP8.43□□□□□ -1.06
CLK1-215ENST00000621181 DERAQ9Y315 318 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 C2CD2Q9Y426 696 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 PCDHB5Q9Y5E4 795 aa8.43□□□□□ -1.06
CLK1-215ENST00000621181 NUP205Q92621 2012 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 GON4LQ3T8J9 2241 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 IGF2RP11717 2491 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 BCLAF3A2AJT9 711 aaKnown RBP8.42□□□□□ -1.06
CLK1-215ENST00000621181 C2orf72A6NCS6 295 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 C1QTNF9BB2RNN3 333 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 GIPC1O14908 333 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 STX6O43752 255 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 F13A1P00488 732 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 PIGRP01833 764 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 F11P03951 625 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 KRT18P05783 430 aaKnown RBP8.42□□□□□ -1.06
CLK1-215ENST00000621181 C1QTNF9P0C862 333 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 HMGA1P17096 107 aaKnown RBP8.42□□□□□ -1.06
CLK1-215ENST00000621181 GJA4P35212 333 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 ATP2C1P98194 919 aaPredicted RBP8.42□□□□□ -1.06
CLK1-215ENST00000621181 TSPY1Q01534 308 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 FAM160A1Q05DH4 1040 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 ZNF252P-AS1Q0IIN9 211 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 FOXC1Q12948 553 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 MTF1Q14872 753 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 ARSHQ5FYA8 562 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 SH3PXD2AQ5TCZ1 1133 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 NAIF1Q69YI7 327 aaPredicted RBP8.42□□□□□ -1.06
CLK1-215ENST00000621181 ADALQ6DHV7 355 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 GPBP1Q86WP2 473 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 STKLD1Q8NE28 680 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 RIN3Q8TB24 985 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 ZSCAN31Q96LW9 406 aaPredicted RBP8.42□□□□□ -1.06
CLK1-215ENST00000621181 PI4K2AQ9BTU6 479 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 ASB7Q9H672 318 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 ECT2Q9H8V3 914 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 GDPD2Q9HCC8 539 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 TRPC7Q9HCX4 862 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 DUS2Q9NX74 493 aaKnown RBP8.42□□□□□ -1.06
CLK1-215ENST00000621181 DPP3Q9NY33 737 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms