RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 MSANTD3Q96H12 275 aa19.48■□□□□ 0.71
VCX3A-203ENST00000612369 MYRFLQ96LU7 910 aa19.48■□□□□ 0.71
VCX3A-203ENST00000612369 SNX25Q9H3E2 840 aa19.48■□□□□ 0.71
VCX3A-203ENST00000612369 GOLPH3LQ9H4A5 285 aa19.48■□□□□ 0.71
VCX3A-203ENST00000612369 VRTNQ9H8Y1 702 aa19.48■□□□□ 0.71
VCX3A-203ENST00000612369 MAGEC2Q9UBF1 373 aaPredicted RBP19.48■□□□□ 0.71
VCX3A-203ENST00000612369 LRRIQ3A6PVS8 624 aaPredicted RBP19.47■□□□□ 0.71
VCX3A-203ENST00000612369 MAPK13O15264 365 aa19.47■□□□□ 0.71
VCX3A-203ENST00000612369 NOL4O94818 638 aa19.47■□□□□ 0.71
VCX3A-203ENST00000612369 PRR29P0C7W0 189 aa19.47■□□□□ 0.71
VCX3A-203ENST00000612369 GNL1P36915 607 aaPredicted RBP19.47■□□□□ 0.71
VCX3A-203ENST00000612369 RPS9P46781 194 aaKnown RBP19.47■□□□□ 0.71
VCX3A-203ENST00000612369 CYP4F8P98187 520 aa19.47■□□□□ 0.71
VCX3A-203ENST00000612369 NFIL3Q16649 462 aa19.47■□□□□ 0.71
VCX3A-203ENST00000612369 DDR2Q16832 855 aa19.47■□□□□ 0.71
VCX3A-203ENST00000612369 ARHGAP29Q52LW3 1261 aa19.47■□□□□ 0.71
VCX3A-203ENST00000612369 MYCBPAPQ8TBZ2 947 aa19.47■□□□□ 0.71
VCX3A-203ENST00000612369 TMC2Q8TDI7 906 aa19.47■□□□□ 0.71
VCX3A-203ENST00000612369 CSGALNACT1Q8TDX6 532 aa19.47■□□□□ 0.71
VCX3A-203ENST00000612369 CLDN23Q96B33 292 aa19.47■□□□□ 0.71
VCX3A-203ENST00000612369 RSPRY1Q96DX4 576 aa19.47■□□□□ 0.71
VCX3A-203ENST00000612369 SLC46A2Q9BY10 475 aa19.47■□□□□ 0.71
VCX3A-203ENST00000612369 XYLT2Q9H1B5 865 aa19.47■□□□□ 0.71
VCX3A-203ENST00000612369 GDPD2Q9HCC8 539 aa19.47■□□□□ 0.71
VCX3A-203ENST00000612369 FRMD4BQ9Y2L6 1034 aa19.47■□□□□ 0.71
VCX3A-203ENST00000612369 ARNTLO00327 626 aa19.46■□□□□ 0.71
VCX3A-203ENST00000612369 IKBKBO14920 756 aa19.46■□□□□ 0.71
VCX3A-203ENST00000612369 HCRTO43612 131 aa19.46■□□□□ 0.71
VCX3A-203ENST00000612369 C4BPAP04003 597 aaKnown RBP19.46■□□□□ 0.71
VCX3A-203ENST00000612369 CD72P21854 359 aa19.46■□□□□ 0.71
VCX3A-203ENST00000612369 CASP4P49662 377 aa19.46■□□□□ 0.71
VCX3A-203ENST00000612369 GPR15P49685 360 aa19.46■□□□□ 0.71
VCX3A-203ENST00000612369 MYL6P60660 151 aa19.46■□□□□ 0.71
VCX3A-203ENST00000612369 BIRC3Q13489 604 aa19.46■□□□□ 0.71
VCX3A-203ENST00000612369 TMEM150AQ86TG1 271 aa19.46■□□□□ 0.71
VCX3A-203ENST00000612369 CMTM8Q8IZV2 173 aa19.46■□□□□ 0.71
VCX3A-203ENST00000612369 GUF1Q8N442 669 aaKnown RBP19.46■□□□□ 0.71
VCX3A-203ENST00000612369 CELF5Q8N6W0 485 aaKnown RBP19.46■□□□□ 0.71
VCX3A-203ENST00000612369 PLEKHO2Q8TD55 490 aa19.46■□□□□ 0.71
VCX3A-203ENST00000612369 BPIFB1Q8TDL5 484 aa19.46■□□□□ 0.71
VCX3A-203ENST00000612369 MRPS31Q92665 395 aaKnown RBP19.46■□□□□ 0.71
VCX3A-203ENST00000612369 MRPL45Q9BRJ2 306 aaKnown RBP19.46■□□□□ 0.71
VCX3A-203ENST00000612369 CRTAC1Q9NQ79 661 aa19.46■□□□□ 0.71
VCX3A-203ENST00000612369 MAGED2Q9UNF1 606 aaPredicted RBP19.46■□□□□ 0.71
VCX3A-203ENST00000612369 MTF2Q9Y483 593 aaPredicted RBP19.46■□□□□ 0.71
VCX3A-203ENST00000612369 NCANO14594 1321 aa19.46■□□□□ 0.71
VCX3A-203ENST00000612369 GOLGA6L4A6NEF3 574 aa19.45■□□□□ 0.7
VCX3A-203ENST00000612369 SHISA7A6NL88 538 aa19.45■□□□□ 0.7
VCX3A-203ENST00000612369 SLC38A8A6NNN8 435 aa19.45■□□□□ 0.7
VCX3A-203ENST00000612369 ATP2C2O75185 946 aa19.45■□□□□ 0.7
VCX3A-203ENST00000612369 LRRN2O75325 713 aa19.45■□□□□ 0.7
VCX3A-203ENST00000612369 PDGFRBP09619 1106 aa19.45■□□□□ 0.7
VCX3A-203ENST00000612369 TARSP26639 723 aaKnown RBP19.45■□□□□ 0.7
VCX3A-203ENST00000612369 AVPR1AP37288 418 aa19.45■□□□□ 0.7
VCX3A-203ENST00000612369 PSMC1P62191 440 aaKnown RBP19.45■□□□□ 0.7
VCX3A-203ENST00000612369 PLCB2Q00722 1185 aa19.45■□□□□ 0.7
VCX3A-203ENST00000612369 TDRD10Q5VZ19 366 aaKnown RBP19.45■□□□□ 0.7
VCX3A-203ENST00000612369 SCN4BQ8IWT1 228 aa19.45■□□□□ 0.7
VCX3A-203ENST00000612369 OR6B3Q8NGW1 331 aa19.45■□□□□ 0.7
VCX3A-203ENST00000612369 MYLPFQ96A32 169 aa19.45■□□□□ 0.7
VCX3A-203ENST00000612369 SPATA17Q96L03 361 aa19.45■□□□□ 0.7
VCX3A-203ENST00000612369 C8orf33Q9H7E9 229 aaPredicted RBP19.45■□□□□ 0.7
VCX3A-203ENST00000612369 KIF9Q9HAQ2 790 aa19.45■□□□□ 0.7
VCX3A-203ENST00000612369 THG1LQ9NWX6 298 aaKnown RBP19.45■□□□□ 0.7
VCX3A-203ENST00000612369 EHD2Q9NZN4 543 aa19.45■□□□□ 0.7
VCX3A-203ENST00000612369 PIAS3Q9Y6X2 628 aa19.45■□□□□ 0.7
VCX3A-203ENST00000612369 DENND4CQ5VZ89 1909 aa19.45■□□□□ 0.7
VCX3A-203ENST00000612369 RPL13P26373 211 aaKnown RBP19.44■□□□□ 0.7
VCX3A-203ENST00000612369 ENPEPQ07075 957 aa19.44■□□□□ 0.7
VCX3A-203ENST00000612369 NCOA4Q13772 614 aa19.44■□□□□ 0.7
VCX3A-203ENST00000612369 ZNF699Q32M78 642 aa19.44■□□□□ 0.7
VCX3A-203ENST00000612369 ZNF667Q5HYK9 610 aa19.44■□□□□ 0.7
VCX3A-203ENST00000612369 SDHAF4Q5VUM1 108 aa19.44■□□□□ 0.7
VCX3A-203ENST00000612369 CEP135Q66GS9 1140 aa19.44■□□□□ 0.7
VCX3A-203ENST00000612369 MON1AQ86VX9 555 aa19.44■□□□□ 0.7
VCX3A-203ENST00000612369 MAB21L3Q8N8X9 362 aa19.44■□□□□ 0.7
VCX3A-203ENST00000612369 FAM3CQ92520 227 aa19.44■□□□□ 0.7
VCX3A-203ENST00000612369 TAF4BQ92750 862 aa19.44■□□□□ 0.7
VCX3A-203ENST00000612369 PCED1BQ96HM7 432 aa19.44■□□□□ 0.7
VCX3A-203ENST00000612369 SEMA4AQ9H3S1 761 aa19.44■□□□□ 0.7
VCX3A-203ENST00000612369 NXF1Q9UBU9 619 aaKnown RBP19.44■□□□□ 0.7
VCX3A-203ENST00000612369 COL4A2P08572 1712 aa19.44■□□□□ 0.7
VCX3A-203ENST00000612369 F5P12259 2224 aa19.44■□□□□ 0.7
VCX3A-203ENST00000612369 COL4A3Q01955 1670 aa19.43■□□□□ 0.7
VCX3A-203ENST00000612369 TICRRQ7Z2Z1 1910 aa19.43■□□□□ 0.7
VCX3A-203ENST00000612369 A8MXQ7 604 aa19.43■□□□□ 0.7
VCX3A-203ENST00000612369 TRIM66O15016 1216 aa19.43■□□□□ 0.7
VCX3A-203ENST00000612369 GFRA3O60609 400 aa19.43■□□□□ 0.7
VCX3A-203ENST00000612369 PRAMEF12O95522 483 aa19.43■□□□□ 0.7
VCX3A-203ENST00000612369 P4HA1P13674 534 aa19.43■□□□□ 0.7
VCX3A-203ENST00000612369 PTPN1P18031 435 aaKnown RBP19.43■□□□□ 0.7
VCX3A-203ENST00000612369 BDNFP23560 247 aa19.43■□□□□ 0.7
VCX3A-203ENST00000612369 NR2F2P24468 414 aa19.43■□□□□ 0.7
VCX3A-203ENST00000612369 GRIK1P39086 918 aa19.43■□□□□ 0.7
VCX3A-203ENST00000612369 CYP27A1Q02318 531 aa19.43■□□□□ 0.7
VCX3A-203ENST00000612369 ZNF268Q14587 947 aaPredicted RBP19.43■□□□□ 0.7
VCX3A-203ENST00000612369 CCDC142Q17RM4 750 aa19.43■□□□□ 0.7
VCX3A-203ENST00000612369 SGSM1Q2NKQ1 1148 aa19.43■□□□□ 0.7
VCX3A-203ENST00000612369 ZNF528Q3MIS6 628 aa19.43■□□□□ 0.7
VCX3A-203ENST00000612369 ZACNQ401N2 412 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms