RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 K7ELQ4 463 aaPredicted RBP19.07■□□□□ 0.64
SSBP1-215ENST00000612337 TADA3O75528 432 aa19.07■□□□□ 0.64
SSBP1-215ENST00000612337 CNR2P34972 360 aa19.07■□□□□ 0.64
SSBP1-215ENST00000612337 FNTBP49356 437 aa19.07■□□□□ 0.64
SSBP1-215ENST00000612337 DMWDQ09019 674 aa19.07■□□□□ 0.64
SSBP1-215ENST00000612337 MYO1EQ12965 1108 aa19.07■□□□□ 0.64
SSBP1-215ENST00000612337 RUNX3Q13761 415 aa19.07■□□□□ 0.64
SSBP1-215ENST00000612337 SURF1Q15526 300 aa19.07■□□□□ 0.64
SSBP1-215ENST00000612337 E2F4Q16254 413 aa19.07■□□□□ 0.64
SSBP1-215ENST00000612337 LPAL2Q16609 132 aa19.07■□□□□ 0.64
SSBP1-215ENST00000612337 SOWAHAQ2M3V2 549 aa19.07■□□□□ 0.64
SSBP1-215ENST00000612337 CFAP221Q4G0U5 840 aa19.07■□□□□ 0.64
SSBP1-215ENST00000612337 LMBRD2Q68DH5 695 aaPredicted RBP19.07■□□□□ 0.64
SSBP1-215ENST00000612337 PRR23BQ6ZRT6 265 aa19.07■□□□□ 0.64
SSBP1-215ENST00000612337 DPH6Q7L8W6 267 aa19.07■□□□□ 0.64
SSBP1-215ENST00000612337 FUBP3Q96I24 572 aaKnown RBP eCLIP19.07■□□□□ 0.64
SSBP1-215ENST00000612337 MYRFLQ96LU7 910 aa19.07■□□□□ 0.64
SSBP1-215ENST00000612337 CUEDC2Q9H467 287 aa19.07■□□□□ 0.64
SSBP1-215ENST00000612337 PARD6AQ9NPB6 346 aa19.07■□□□□ 0.64
SSBP1-215ENST00000612337 C2orf42Q9NWW7 574 aa19.07■□□□□ 0.64
SSBP1-215ENST00000612337 GTF3C4Q9UKN8 822 aa19.07■□□□□ 0.64
SSBP1-215ENST00000612337 USP18Q9UMW8 372 aa19.07■□□□□ 0.64
SSBP1-215ENST00000612337 R3HCC1Q9Y3T6 440 aaKnown RBP19.07■□□□□ 0.64
SSBP1-215ENST00000612337 SPTBN2O15020 2390 aa19.06■□□□□ 0.64
SSBP1-215ENST00000612337 SPTLC2O15270 562 aa19.06■□□□□ 0.64
SSBP1-215ENST00000612337 HRO43593 1189 aa19.06■□□□□ 0.64
SSBP1-215ENST00000612337 PPP6R2O75170 966 aa19.06■□□□□ 0.64
SSBP1-215ENST00000612337 RETP07949 1114 aa19.06■□□□□ 0.64
SSBP1-215ENST00000612337 HOXA6P31267 233 aa19.06■□□□□ 0.64
SSBP1-215ENST00000612337 SIM2Q14190 667 aaPredicted RBP19.06■□□□□ 0.64
SSBP1-215ENST00000612337 TRIM68Q6AZZ1 485 aa19.06■□□□□ 0.64
SSBP1-215ENST00000612337 FAM171BQ6P995 826 aa19.06■□□□□ 0.64
SSBP1-215ENST00000612337 LIMS2Q7Z4I7 341 aa19.06■□□□□ 0.64
SSBP1-215ENST00000612337 SPATA2LQ8IUW3 424 aaPredicted RBP19.06■□□□□ 0.64
SSBP1-215ENST00000612337 GLIS3Q8NEA6 775 aa19.06■□□□□ 0.64
SSBP1-215ENST00000612337 OR5B17Q8NGF7 314 aa19.06■□□□□ 0.64
SSBP1-215ENST00000612337 HPS3Q969F9 1004 aa19.06■□□□□ 0.64
SSBP1-215ENST00000612337 HPDLQ96IR7 371 aa19.06■□□□□ 0.64
SSBP1-215ENST00000612337 TRIM9Q9C026 710 aa19.06■□□□□ 0.64
SSBP1-215ENST00000612337 EBF3Q9H4W6 596 aa19.06■□□□□ 0.64
SSBP1-215ENST00000612337 PTPRJQ12913 1337 aa19.05■□□□□ 0.64
SSBP1-215ENST00000612337 EIF3DO15371 548 aaKnown RBP eCLIP19.05■□□□□ 0.64
SSBP1-215ENST00000612337 LRP3O75074 770 aa19.05■□□□□ 0.64
SSBP1-215ENST00000612337 TNNC2P02585 160 aa19.05■□□□□ 0.64
SSBP1-215ENST00000612337 HOXD13P35453 343 aa19.05■□□□□ 0.64
SSBP1-215ENST00000612337 MAGEA11P43364 429 aa19.05■□□□□ 0.64
SSBP1-215ENST00000612337 AMPD3Q01432 767 aa19.05■□□□□ 0.64
SSBP1-215ENST00000612337 CCDC142Q17RM4 750 aa19.05■□□□□ 0.64
SSBP1-215ENST00000612337 DUOXA2Q1HG44 320 aa19.05■□□□□ 0.64
SSBP1-215ENST00000612337 TMEM196Q5HYL7 178 aa19.05■□□□□ 0.64
SSBP1-215ENST00000612337 CC2D1AQ6P1N0 951 aaPredicted RBP19.05■□□□□ 0.64
SSBP1-215ENST00000612337 CBWD2Q8IUF1 395 aa19.05■□□□□ 0.64
SSBP1-215ENST00000612337 RIN3Q8TB24 985 aa19.05■□□□□ 0.64
SSBP1-215ENST00000612337 CHFRQ96EP1 664 aa19.05■□□□□ 0.64
SSBP1-215ENST00000612337 ZNF396Q96N95 335 aaPredicted RBP19.05■□□□□ 0.64
SSBP1-215ENST00000612337 BACH2Q9BYV9 841 aa19.05■□□□□ 0.64
SSBP1-215ENST00000612337 KIAA1586Q9HCI6 787 aa19.05■□□□□ 0.64
SSBP1-215ENST00000612337 HSPBP1Q9NZL4 362 aa19.05■□□□□ 0.64
SSBP1-215ENST00000612337 OTOL1A6NHN0 477 aaPredicted RBP19.04■□□□□ 0.64
SSBP1-215ENST00000612337 TRDMT1O14717 391 aaKnown RBP19.04■□□□□ 0.64
SSBP1-215ENST00000612337 HCRTO43612 131 aa19.04■□□□□ 0.64
SSBP1-215ENST00000612337 ATXN1P54253 815 aaKnown RBP19.04■□□□□ 0.64
SSBP1-215ENST00000612337 ASIC1P78348 528 aa19.04■□□□□ 0.64
SSBP1-215ENST00000612337 AMPD2Q01433 879 aa19.04■□□□□ 0.64
SSBP1-215ENST00000612337 FAM160A1Q05DH4 1040 aa19.04■□□□□ 0.64
SSBP1-215ENST00000612337 SPEM2Q0P670 501 aa19.04■□□□□ 0.64
SSBP1-215ENST00000612337 GRSF1Q12849 480 aaKnown RBP eCLIP19.04■□□□□ 0.64
SSBP1-215ENST00000612337 PDGFRLQ15198 375 aa19.04■□□□□ 0.64
SSBP1-215ENST00000612337 HEATR6Q6AI08 1181 aaKnown RBP19.04■□□□□ 0.64
SSBP1-215ENST00000612337 CNNM4Q6P4Q7 775 aa19.04■□□□□ 0.64
SSBP1-215ENST00000612337 C4orf50Q6ZRC1 276 aa19.04■□□□□ 0.64
SSBP1-215ENST00000612337 EPM2AIP1Q7L775 607 aaPredicted RBP19.04■□□□□ 0.64
SSBP1-215ENST00000612337 WDR49Q8IV35 697 aa19.04■□□□□ 0.64
SSBP1-215ENST00000612337 IQUBQ8NA54 791 aa19.04■□□□□ 0.64
SSBP1-215ENST00000612337 KBTBD7Q8WVZ9 684 aa19.04■□□□□ 0.64
SSBP1-215ENST00000612337 CDV3Q9UKY7 258 aaKnown RBP19.04■□□□□ 0.64
SSBP1-215ENST00000612337 CDH9Q9ULB4 789 aa19.04■□□□□ 0.64
SSBP1-215ENST00000612337 YEATS4O95619 227 aa19.03■□□□□ 0.64
SSBP1-215ENST00000612337 ARSAP15289 507 aa19.03■□□□□ 0.64
SSBP1-215ENST00000612337 SRSF5Q13243 272 aaKnown RBP19.03■□□□□ 0.64
SSBP1-215ENST00000612337 MTF1Q14872 753 aa19.03■□□□□ 0.64
SSBP1-215ENST00000612337 FSTL4Q6MZW2 842 aa19.03■□□□□ 0.64
SSBP1-215ENST00000612337 WDR5BQ86VZ2 330 aa19.03■□□□□ 0.64
SSBP1-215ENST00000612337 SCN4BQ8IWT1 228 aa19.03■□□□□ 0.64
SSBP1-215ENST00000612337 ZNF507Q8TCN5 953 aa19.03■□□□□ 0.64
SSBP1-215ENST00000612337 DHX58Q96C10 678 aa19.03■□□□□ 0.64
SSBP1-215ENST00000612337 SYT15Q9BQS2 421 aa19.03■□□□□ 0.64
SSBP1-215ENST00000612337 TRPC7Q9HCX4 862 aa19.03■□□□□ 0.64
SSBP1-215ENST00000612337 TFIP11Q9UBB9 837 aaKnown RBP19.03■□□□□ 0.64
SSBP1-215ENST00000612337 MAGEC2Q9UBF1 373 aaPredicted RBP19.03■□□□□ 0.64
SSBP1-215ENST00000612337 ANAPC1Q9H1A4 1944 aa19.03■□□□□ 0.64
SSBP1-215ENST00000612337 GREB1Q4ZG55 1949 aa19.02■□□□□ 0.64
SSBP1-215ENST00000612337 TRAV19A0A0A6YYK7 116 aa19.02■□□□□ 0.64
SSBP1-215ENST00000612337 CUTAO60888 179 aa19.02■□□□□ 0.64
SSBP1-215ENST00000612337 ATP2C2O75185 946 aa19.02■□□□□ 0.64
SSBP1-215ENST00000612337 CKMP06732 381 aa19.02■□□□□ 0.64
SSBP1-215ENST00000612337 USP17L7P0C7H9 530 aa19.02■□□□□ 0.64
SSBP1-215ENST00000612337 WARSP23381 471 aaKnown RBP19.02■□□□□ 0.64
SSBP1-215ENST00000612337 LMO2P25791 158 aa19.02■□□□□ 0.64
SSBP1-215ENST00000612337 ZNF77Q15935 545 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms