RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 CFAP221Q4G0U5 840 aa20.94■□□□□ 0.94
SHKBP1-214ENST00000597396 PABPC1LQ4VXU2 614 aaKnown RBP20.94■□□□□ 0.94
SHKBP1-214ENST00000597396 VWA3BQ502W6 1294 aa20.94■□□□□ 0.94
SHKBP1-214ENST00000597396 TMEM31Q5JXX7 168 aa20.94■□□□□ 0.94
SHKBP1-214ENST00000597396 CDKAL1Q5VV42 579 aa20.94■□□□□ 0.94
SHKBP1-214ENST00000597396 GBP6Q6ZN66 633 aa20.94■□□□□ 0.94
SHKBP1-214ENST00000597396 PPM1KQ8N3J5 372 aa20.94■□□□□ 0.94
SHKBP1-214ENST00000597396 ANKRD20A12PQ8NF67 263 aa20.94■□□□□ 0.94
SHKBP1-214ENST00000597396 LMO3Q8TAP4 145 aa20.94■□□□□ 0.94
SHKBP1-214ENST00000597396 PCED1BQ96HM7 432 aa20.94■□□□□ 0.94
SHKBP1-214ENST00000597396 ARID3AQ99856 593 aa20.94■□□□□ 0.94
SHKBP1-214ENST00000597396 LPIN3Q9BQK8 851 aa20.94■□□□□ 0.94
SHKBP1-214ENST00000597396 CORO1BQ9BR76 489 aa20.94■□□□□ 0.94
SHKBP1-214ENST00000597396 LRFN3Q9BTN0 628 aa20.94■□□□□ 0.94
SHKBP1-214ENST00000597396 FUCA2Q9BTY2 467 aa20.94■□□□□ 0.94
SHKBP1-214ENST00000597396 NT5C1AQ9BXI3 368 aa20.94■□□□□ 0.94
SHKBP1-214ENST00000597396 CEP72Q9P209 647 aa20.94■□□□□ 0.94
SHKBP1-214ENST00000597396 DNMT3BQ9UBC3 853 aaKnown RBP20.94■□□□□ 0.94
SHKBP1-214ENST00000597396 NR2E1Q9Y466 385 aa20.94■□□□□ 0.94
SHKBP1-214ENST00000597396 ATP8B3O60423 1300 aa20.94■□□□□ 0.94
SHKBP1-214ENST00000597396 DENND4CQ5VZ89 1909 aa20.94■□□□□ 0.94
SHKBP1-214ENST00000597396 ZNF638Q14966 1978 aaKnown RBP20.94■□□□□ 0.94
SHKBP1-214ENST00000597396 CILPO75339 1184 aa20.93■□□□□ 0.94
SHKBP1-214ENST00000597396 BDNFP23560 247 aa20.93■□□□□ 0.94
SHKBP1-214ENST00000597396 FSHRP23945 695 aa20.93■□□□□ 0.94
SHKBP1-214ENST00000597396 RPL10AP62906 217 aaKnown RBP20.93■□□□□ 0.94
SHKBP1-214ENST00000597396 ZP2Q05996 745 aa20.93■□□□□ 0.94
SHKBP1-214ENST00000597396 TAF12Q16514 161 aa20.93■□□□□ 0.94
SHKBP1-214ENST00000597396 GET4Q7L5D6 327 aaPredicted RBP20.93■□□□□ 0.94
SHKBP1-214ENST00000597396 ITIH5Q86UX2 942 aa20.93■□□□□ 0.94
SHKBP1-214ENST00000597396 SCN4BQ8IWT1 228 aa20.93■□□□□ 0.94
SHKBP1-214ENST00000597396 GJD3Q8N144 294 aa20.93■□□□□ 0.94
SHKBP1-214ENST00000597396 BPIFA3Q9BQP9 254 aa20.93■□□□□ 0.94
SHKBP1-214ENST00000597396 CRACR2AQ9BSW2 395 aa20.93■□□□□ 0.94
SHKBP1-214ENST00000597396 MED10Q9BTT4 135 aa20.93■□□□□ 0.94
SHKBP1-214ENST00000597396 NDST4Q9H3R1 872 aa20.93■□□□□ 0.94
SHKBP1-214ENST00000597396 FAM124BQ9H5Z6 455 aaPredicted RBP20.93■□□□□ 0.94
SHKBP1-214ENST00000597396 CISHQ9NSE2 258 aa20.93■□□□□ 0.94
SHKBP1-214ENST00000597396 TAB2Q9NYJ8 693 aa20.93■□□□□ 0.94
SHKBP1-214ENST00000597396 ASB3Q9Y575 518 aa20.93■□□□□ 0.94
SHKBP1-214ENST00000597396 MYO10Q9HD67 2058 aa20.93■□□□□ 0.94
SHKBP1-214ENST00000597396 C5orf42Q9H799 3197 aa20.93■□□□□ 0.94
SHKBP1-214ENST00000597396 GTPBP10A4D1E9 387 aaKnown RBP20.92■□□□□ 0.94
SHKBP1-214ENST00000597396 SMTNL1A8MU46 457 aa20.92■□□□□ 0.94
SHKBP1-214ENST00000597396 RHOP08100 348 aa20.92■□□□□ 0.94
SHKBP1-214ENST00000597396 ATF6P18850 670 aa20.92■□□□□ 0.94
SHKBP1-214ENST00000597396 CDK11BP21127 795 aaKnown RBP20.92■□□□□ 0.94
SHKBP1-214ENST00000597396 GBP2P32456 591 aaPredicted RBP20.92■□□□□ 0.94
SHKBP1-214ENST00000597396 MAGEA11P43364 429 aa20.92■□□□□ 0.94
SHKBP1-214ENST00000597396 ZNF165P49910 485 aa20.92■□□□□ 0.94
SHKBP1-214ENST00000597396 EXOC3L4Q17RC7 722 aa20.92■□□□□ 0.94
SHKBP1-214ENST00000597396 ZNF394Q53GI3 561 aa20.92■□□□□ 0.94
SHKBP1-214ENST00000597396 OTOP3Q7RTS5 596 aa20.92■□□□□ 0.94
SHKBP1-214ENST00000597396 CRYBG2Q8N1P7 616 aa20.92■□□□□ 0.94
SHKBP1-214ENST00000597396 TDRD5Q8NAT2 981 aaKnown RBP20.92■□□□□ 0.94
SHKBP1-214ENST00000597396 GIPC2Q8TF65 315 aa20.92■□□□□ 0.94
SHKBP1-214ENST00000597396 ACSF2Q96CM8 615 aaPredicted RBP20.92■□□□□ 0.94
SHKBP1-214ENST00000597396 TWNKQ96RR1 684 aa20.92■□□□□ 0.94
SHKBP1-214ENST00000597396 B3GNT5Q9BYG0 378 aa20.92■□□□□ 0.94
SHKBP1-214ENST00000597396 ASAH2Q9NR71 780 aa20.92■□□□□ 0.94
SHKBP1-214ENST00000597396 OBSL1O75147 1896 aa20.91■□□□□ 0.94
SHKBP1-214ENST00000597396 GRIK1P39086 918 aa20.91■□□□□ 0.94
SHKBP1-214ENST00000597396 GPR15P49685 360 aa20.91■□□□□ 0.94
SHKBP1-214ENST00000597396 NCAPHQ15003 741 aa20.91■□□□□ 0.94
SHKBP1-214ENST00000597396 KRT31Q15323 416 aa20.91■□□□□ 0.94
SHKBP1-214ENST00000597396 DDR2Q16832 855 aa20.91■□□□□ 0.94
SHKBP1-214ENST00000597396 MIIPQ5JXC2 388 aa20.91■□□□□ 0.94
SHKBP1-214ENST00000597396 CYP4A22Q5TCH4 519 aa20.91■□□□□ 0.94
SHKBP1-214ENST00000597396 VSTM1Q6UX27 236 aa20.91■□□□□ 0.94
SHKBP1-214ENST00000597396 PDZD4Q76G19 769 aaPredicted RBP20.91■□□□□ 0.94
SHKBP1-214ENST00000597396 ARHGEF19Q8IW93 802 aa20.91■□□□□ 0.94
SHKBP1-214ENST00000597396 HS6ST3Q8IZP7 471 aa20.91■□□□□ 0.94
SHKBP1-214ENST00000597396 PSMG2Q969U7 264 aa20.91■□□□□ 0.94
SHKBP1-214ENST00000597396 ELOVL4Q9GZR5 314 aa20.91■□□□□ 0.94
SHKBP1-214ENST00000597396 USTQ9Y2C2 406 aa20.91■□□□□ 0.94
SHKBP1-214ENST00000597396 MRPS23Q9Y3D9 190 aaKnown RBP20.91■□□□□ 0.94
SHKBP1-214ENST00000597396 FAM86C2PA6NEL3 165 aa20.9■□□□□ 0.94
SHKBP1-214ENST00000597396 BECN2A8MW95 431 aa20.9■□□□□ 0.94
SHKBP1-214ENST00000597396 PI4K2BG5E9Z4 385 aa20.9■□□□□ 0.94
SHKBP1-214ENST00000597396 CLDN5O00501 218 aa20.9■□□□□ 0.94
SHKBP1-214ENST00000597396 ZNF197O14709 1029 aa20.9■□□□□ 0.94
SHKBP1-214ENST00000597396 MYL4P12829 197 aa20.9■□□□□ 0.94
SHKBP1-214ENST00000597396 CCDC130P13994 396 aa20.9■□□□□ 0.94
SHKBP1-214ENST00000597396 ANXA13P27216 316 aa20.9■□□□□ 0.94
SHKBP1-214ENST00000597396 SDHAF4Q5VUM1 108 aa20.9■□□□□ 0.94
SHKBP1-214ENST00000597396 TRIM65Q6PJ69 517 aa20.9■□□□□ 0.94
SHKBP1-214ENST00000597396 RRAGAQ7L523 313 aa20.9■□□□□ 0.94
SHKBP1-214ENST00000597396 DNAJB7Q7Z6W7 309 aaPredicted RBP20.9■□□□□ 0.94
SHKBP1-214ENST00000597396 FAM35AQ86V20 835 aa20.9■□□□□ 0.94
SHKBP1-214ENST00000597396 LEMD2Q8NC56 503 aa20.9■□□□□ 0.94
SHKBP1-214ENST00000597396 GPR152Q8TDT2 470 aa20.9■□□□□ 0.94
SHKBP1-214ENST00000597396 WHAMMQ8TF30 809 aa20.9■□□□□ 0.94
SHKBP1-214ENST00000597396 ZNF518BQ9C0D4 1074 aa20.9■□□□□ 0.94
SHKBP1-214ENST00000597396 VPS16Q9H269 839 aa20.9■□□□□ 0.94
SHKBP1-214ENST00000597396 FAM49BQ9NUQ9 324 aa20.9■□□□□ 0.94
SHKBP1-214ENST00000597396 C2CD4DB7Z1M9 353 aa20.89■□□□□ 0.93
SHKBP1-214ENST00000597396 LOC730098B7Z3J9 87 aa20.89■□□□□ 0.93
SHKBP1-214ENST00000597396 TRIM66O15016 1216 aa20.89■□□□□ 0.93
SHKBP1-214ENST00000597396 SLC9A1P19634 815 aa20.89■□□□□ 0.93
SHKBP1-214ENST00000597396 GCNT1Q02742 428 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 215.2 ms