RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 UXTQ9UBK9 157 aaPredicted RBP19.2■□□□□ 0.66
CHMP2A-203ENST00000597209 SP9P0CG40 484 aa19.19■□□□□ 0.66
CHMP2A-203ENST00000597209 LMO2P25791 158 aa19.19■□□□□ 0.66
CHMP2A-203ENST00000597209 GPR15P49685 360 aa19.19■□□□□ 0.66
CHMP2A-203ENST00000597209 NDUFA8P51970 172 aa19.19■□□□□ 0.66
CHMP2A-203ENST00000597209 DDR2Q16832 855 aa19.19■□□□□ 0.66
CHMP2A-203ENST00000597209 ZNF528Q3MIS6 628 aa19.19■□□□□ 0.66
CHMP2A-203ENST00000597209 ASCL5Q7RTU5 278 aa19.19■□□□□ 0.66
CHMP2A-203ENST00000597209 MAML2Q8IZL2 1156 aaPredicted RBP19.19■□□□□ 0.66
CHMP2A-203ENST00000597209 CMTM8Q8IZV2 173 aa19.19■□□□□ 0.66
CHMP2A-203ENST00000597209 CELF5Q8N6W0 485 aaKnown RBP19.19■□□□□ 0.66
CHMP2A-203ENST00000597209 CSGALNACT1Q8TDX6 532 aa19.19■□□□□ 0.66
CHMP2A-203ENST00000597209 PARD3BQ8TEW8 1205 aa19.19■□□□□ 0.66
CHMP2A-203ENST00000597209 LRRC3BQ96PB8 259 aa19.19■□□□□ 0.66
CHMP2A-203ENST00000597209 MMS19Q96T76 1030 aa19.19■□□□□ 0.66
CHMP2A-203ENST00000597209 C8orf33Q9H7E9 229 aaPredicted RBP19.19■□□□□ 0.66
CHMP2A-203ENST00000597209 MAGEC2Q9UBF1 373 aaPredicted RBP19.19■□□□□ 0.66
CHMP2A-203ENST00000597209 FBXO4Q9UKT5 387 aa19.19■□□□□ 0.66
CHMP2A-203ENST00000597209 PIAS3Q9Y6X2 628 aa19.19■□□□□ 0.66
CHMP2A-203ENST00000597209 TICRRQ7Z2Z1 1910 aa19.19■□□□□ 0.66
CHMP2A-203ENST00000597209 DENND4CQ5VZ89 1909 aa19.18■□□□□ 0.66
CHMP2A-203ENST00000597209 HCRTO43612 131 aa19.18■□□□□ 0.66
CHMP2A-203ENST00000597209 RHOBTB3O94955 611 aa19.18■□□□□ 0.66
CHMP2A-203ENST00000597209 KIF20AO95235 890 aa19.18■□□□□ 0.66
CHMP2A-203ENST00000597209 RPN1P04843 607 aaKnown RBP19.18■□□□□ 0.66
CHMP2A-203ENST00000597209 PLCB2Q00722 1185 aa19.18■□□□□ 0.66
CHMP2A-203ENST00000597209 TRPC3Q13507 836 aa19.18■□□□□ 0.66
CHMP2A-203ENST00000597209 WDR72Q3MJ13 1102 aa19.18■□□□□ 0.66
CHMP2A-203ENST00000597209 VSTM1Q6UX27 236 aa19.18■□□□□ 0.66
CHMP2A-203ENST00000597209 MAMSTRQ6ZN01 415 aa19.18■□□□□ 0.66
CHMP2A-203ENST00000597209 BPIFB1Q8TDL5 484 aa19.18■□□□□ 0.66
CHMP2A-203ENST00000597209 FAM3CQ92520 227 aa19.18■□□□□ 0.66
CHMP2A-203ENST00000597209 CCDC47Q96A33 483 aaKnown RBP19.18■□□□□ 0.66
CHMP2A-203ENST00000597209 SYAP1Q96A49 352 aaPredicted RBP19.18■□□□□ 0.66
CHMP2A-203ENST00000597209 IER2Q9BTL4 223 aa19.18■□□□□ 0.66
CHMP2A-203ENST00000597209 VRTNQ9H8Y1 702 aa19.18■□□□□ 0.66
CHMP2A-203ENST00000597209 SPATA6Q9NWH7 488 aaPredicted RBP19.18■□□□□ 0.66
CHMP2A-203ENST00000597209 PATJQ8NI35 1801 aa19.18■□□□□ 0.66
CHMP2A-203ENST00000597209 SLC38A8A6NNN8 435 aa19.17■□□□□ 0.66
CHMP2A-203ENST00000597209 LAMTOR5O43504 91 aa19.17■□□□□ 0.66
CHMP2A-203ENST00000597209 ATP2C2O75185 946 aa19.17■□□□□ 0.66
CHMP2A-203ENST00000597209 PRAMEF12O95522 483 aa19.17■□□□□ 0.66
CHMP2A-203ENST00000597209 GNL1P36915 607 aaPredicted RBP19.17■□□□□ 0.66
CHMP2A-203ENST00000597209 DPYDQ12882 1025 aa19.17■□□□□ 0.66
CHMP2A-203ENST00000597209 SDHAF4Q5VUM1 108 aa19.17■□□□□ 0.66
CHMP2A-203ENST00000597209 KRBA2Q6ZNG9 492 aa19.17■□□□□ 0.66
CHMP2A-203ENST00000597209 MON1AQ86VX9 555 aa19.17■□□□□ 0.66
CHMP2A-203ENST00000597209 MYCBPAPQ8TBZ2 947 aa19.17■□□□□ 0.66
CHMP2A-203ENST00000597209 PLEKHO2Q8TD55 490 aa19.17■□□□□ 0.66
CHMP2A-203ENST00000597209 MRPS31Q92665 395 aaKnown RBP19.17■□□□□ 0.66
CHMP2A-203ENST00000597209 SPATA17Q96L03 361 aa19.17■□□□□ 0.66
CHMP2A-203ENST00000597209 XYLT2Q9H1B5 865 aa19.17■□□□□ 0.66
CHMP2A-203ENST00000597209 KIF9Q9HAQ2 790 aa19.17■□□□□ 0.66
CHMP2A-203ENST00000597209 CRTAC1Q9NQ79 661 aa19.17■□□□□ 0.66
CHMP2A-203ENST00000597209 THG1LQ9NWX6 298 aaKnown RBP19.17■□□□□ 0.66
CHMP2A-203ENST00000597209 MAGED2Q9UNF1 606 aaPredicted RBP19.17■□□□□ 0.66
CHMP2A-203ENST00000597209 TRAF3IP3Q9Y228 551 aa19.17■□□□□ 0.66
CHMP2A-203ENST00000597209 LRRIQ3A6PVS8 624 aaPredicted RBP19.16■□□□□ 0.66
CHMP2A-203ENST00000597209 PDGFRBP09619 1106 aa19.16■□□□□ 0.66
CHMP2A-203ENST00000597209 AVPR1AP37288 418 aa19.16■□□□□ 0.66
CHMP2A-203ENST00000597209 MYL6P60660 151 aa19.16■□□□□ 0.66
CHMP2A-203ENST00000597209 TNNC1P63316 161 aa19.16■□□□□ 0.66
CHMP2A-203ENST00000597209 BECN1Q14457 450 aa19.16■□□□□ 0.66
CHMP2A-203ENST00000597209 ZNF268Q14587 947 aaPredicted RBP19.16■□□□□ 0.66
CHMP2A-203ENST00000597209 NFIL3Q16649 462 aa19.16■□□□□ 0.66
CHMP2A-203ENST00000597209 CCDC142Q17RM4 750 aa19.16■□□□□ 0.66
CHMP2A-203ENST00000597209 ZC3H14Q6PJT7 736 aaKnown RBP19.16■□□□□ 0.66
CHMP2A-203ENST00000597209 GPIHBP1Q8IV16 184 aa19.16■□□□□ 0.66
CHMP2A-203ENST00000597209 FSIP1Q8NA03 581 aa19.16■□□□□ 0.66
CHMP2A-203ENST00000597209 TMC2Q8TDI7 906 aa19.16■□□□□ 0.66
CHMP2A-203ENST00000597209 MYLPFQ96A32 169 aa19.16■□□□□ 0.66
CHMP2A-203ENST00000597209 MRPL45Q9BRJ2 306 aaKnown RBP19.16■□□□□ 0.66
CHMP2A-203ENST00000597209 CHRDQ9H2X0 955 aa19.16■□□□□ 0.66
CHMP2A-203ENST00000597209 SNX25Q9H3E2 840 aa19.16■□□□□ 0.66
CHMP2A-203ENST00000597209 OBSL1O75147 1896 aa19.16■□□□□ 0.66
CHMP2A-203ENST00000597209 MAPK13O15264 365 aa19.15■□□□□ 0.66
CHMP2A-203ENST00000597209 CALUO43852 315 aaPredicted RBP19.15■□□□□ 0.66
CHMP2A-203ENST00000597209 PHACTR2O75167 634 aa19.15■□□□□ 0.66
CHMP2A-203ENST00000597209 C4BPAP04003 597 aaKnown RBP19.15■□□□□ 0.66
CHMP2A-203ENST00000597209 NR3C1P04150 777 aa19.15■□□□□ 0.66
CHMP2A-203ENST00000597209 PRR29P0C7W0 189 aa19.15■□□□□ 0.66
CHMP2A-203ENST00000597209 CASP4P49662 377 aa19.15■□□□□ 0.66
CHMP2A-203ENST00000597209 PSMC1P62191 440 aaKnown RBP19.15■□□□□ 0.66
CHMP2A-203ENST00000597209 KCNB1Q14721 858 aa19.15■□□□□ 0.66
CHMP2A-203ENST00000597209 TDRD10Q5VZ19 366 aaKnown RBP19.15■□□□□ 0.66
CHMP2A-203ENST00000597209 RALGPS2Q86X27 583 aaPredicted RBP19.15■□□□□ 0.66
CHMP2A-203ENST00000597209 SCN4BQ8IWT1 228 aa19.15■□□□□ 0.66
CHMP2A-203ENST00000597209 MAB21L3Q8N8X9 362 aa19.15■□□□□ 0.66
CHMP2A-203ENST00000597209 GOLPH3LQ9H4A5 285 aa19.15■□□□□ 0.66
CHMP2A-203ENST00000597209 TDP1Q9NUW8 608 aa19.15■□□□□ 0.66
CHMP2A-203ENST00000597209 NDRG2Q9UN36 371 aaKnown RBP19.15■□□□□ 0.66
CHMP2A-203ENST00000597209 NME7Q9Y5B8 376 aa19.15■□□□□ 0.66
CHMP2A-203ENST00000597209 ZFHX2Q9C0A1 2572 aaPredicted RBP19.15■□□□□ 0.66
CHMP2A-203ENST00000597209 FANCMQ8IYD8 2048 aa19.15■□□□□ 0.66
CHMP2A-203ENST00000597209 KIF26AQ9ULI4 1882 aaPredicted RBP19.14■□□□□ 0.65
CHMP2A-203ENST00000597209 TADA3O75528 432 aa19.14■□□□□ 0.65
CHMP2A-203ENST00000597209 ZNF202O95125 648 aa19.14■□□□□ 0.65
CHMP2A-203ENST00000597209 CCNE1P24864 410 aa19.14■□□□□ 0.65
CHMP2A-203ENST00000597209 KPNA1P52294 538 aaPredicted RBP19.14■□□□□ 0.65
CHMP2A-203ENST00000597209 TXNDC8Q6A555 127 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms