RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 ARHGEF37A1IGU5 675 aa20.38■□□□□ 0.85
PKD1-230ENST00000565639 SIGLEC16A6NMB1 481 aa20.38■□□□□ 0.85
PKD1-230ENST00000565639 M0QZQ0 153 aa20.38■□□□□ 0.85
PKD1-230ENST00000565639 ERBB2P04626 1255 aa20.38■□□□□ 0.85
PKD1-230ENST00000565639 CYP11A1P05108 521 aa20.38■□□□□ 0.85
PKD1-230ENST00000565639 CTCFP49711 727 aaPredicted RBP20.38■□□□□ 0.85
PKD1-230ENST00000565639 PEX5P50542 639 aa20.38■□□□□ 0.85
PKD1-230ENST00000565639 BCAT1P54687 386 aa20.38■□□□□ 0.85
PKD1-230ENST00000565639 SNX16P57768 344 aa20.38■□□□□ 0.85
PKD1-230ENST00000565639 PSMC1P62191 440 aaKnown RBP20.38■□□□□ 0.85
PKD1-230ENST00000565639 DCUN1D2Q6PH85 259 aa20.38■□□□□ 0.85
PKD1-230ENST00000565639 CD300LGQ6UXG3 332 aa20.38■□□□□ 0.85
PKD1-230ENST00000565639 GPR161Q8N6U8 529 aaKnown RBP20.38■□□□□ 0.85
PKD1-230ENST00000565639 SPATA4Q8NEY3 305 aa20.38■□□□□ 0.85
PKD1-230ENST00000565639 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.38■□□□□ 0.85
PKD1-230ENST00000565639 SLC35F5Q8WV83 523 aa20.38■□□□□ 0.85
PKD1-230ENST00000565639 MCRS1Q96EZ8 462 aa20.38■□□□□ 0.85
PKD1-230ENST00000565639 SCLYQ96I15 445 aa20.38■□□□□ 0.85
PKD1-230ENST00000565639 RNF216Q9NWF9 866 aaPredicted RBP20.38■□□□□ 0.85
PKD1-230ENST00000565639 DSEQ9UL01 958 aa20.38■□□□□ 0.85
PKD1-230ENST00000565639 PCDHA3Q9Y5H8 950 aa20.38■□□□□ 0.85
PKD1-230ENST00000565639 CEP104O60308 925 aa20.37■□□□□ 0.85
PKD1-230ENST00000565639 PTPN1P18031 435 aaKnown RBP20.37■□□□□ 0.85
PKD1-230ENST00000565639 RPL7AP62424 266 aaKnown RBP20.37■□□□□ 0.85
PKD1-230ENST00000565639 BST2Q10589 180 aaKnown RBP20.37■□□□□ 0.85
PKD1-230ENST00000565639 RSPH1Q8WYR4 309 aa20.37■□□□□ 0.85
PKD1-230ENST00000565639 ALG3Q92685 438 aa20.37■□□□□ 0.85
PKD1-230ENST00000565639 HNRNPABQ99729 332 aaKnown RBP20.37■□□□□ 0.85
PKD1-230ENST00000565639 SLC4A5Q9BY07 1137 aa20.37■□□□□ 0.85
PKD1-230ENST00000565639 PPP1R12CQ9BZL4 782 aa20.37■□□□□ 0.85
PKD1-230ENST00000565639 TBC1D13Q9NVG8 400 aa20.37■□□□□ 0.85
PKD1-230ENST00000565639 DDX43Q9NXZ2 648 aaKnown RBP20.37■□□□□ 0.85
PKD1-230ENST00000565639 TET1Q8NFU7 2136 aa20.37■□□□□ 0.85
PKD1-230ENST00000565639 TMEM189-UBE2V1I3L0A0 370 aa20.37■□□□□ 0.85
PKD1-230ENST00000565639 HOXA2O43364 376 aa20.37■□□□□ 0.85
PKD1-230ENST00000565639 CCL23P55773 120 aa20.37■□□□□ 0.85
PKD1-230ENST00000565639 CLUL1Q15846 466 aa20.37■□□□□ 0.85
PKD1-230ENST00000565639 NOA1Q8NC60 698 aaKnown RBP20.37■□□□□ 0.85
PKD1-230ENST00000565639 MCEEQ96PE7 176 aa20.37■□□□□ 0.85
PKD1-230ENST00000565639 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.37■□□□□ 0.852e-6■■■□□ 18.1
PKD1-230ENST00000565639 C11orf49Q9H6J7 331 aa20.37■□□□□ 0.85
PKD1-230ENST00000565639 CYLDQ9NQC7 956 aa20.37■□□□□ 0.85
PKD1-230ENST00000565639 EHD2Q9NZN4 543 aa20.37■□□□□ 0.85
PKD1-230ENST00000565639 TJP2Q9UDY2 1190 aa20.37■□□□□ 0.85
PKD1-230ENST00000565639 ATP11BQ9Y2G3 1177 aa20.37■□□□□ 0.85
PKD1-230ENST00000565639 PGRMC1O00264 195 aaKnown RBP20.36■□□□□ 0.85
PKD1-230ENST00000565639 DDHD2O94830 711 aa20.36■□□□□ 0.85
PKD1-230ENST00000565639 KRT3P12035 628 aa20.36■□□□□ 0.85
PKD1-230ENST00000565639 CCDC130P13994 396 aa20.36■□□□□ 0.85
PKD1-230ENST00000565639 CYP2C18P33260 490 aa20.36■□□□□ 0.85
PKD1-230ENST00000565639 PDE4CQ08493 712 aa20.36■□□□□ 0.85
PKD1-230ENST00000565639 DCAF12L1Q5VU92 463 aa20.36■□□□□ 0.85
PKD1-230ENST00000565639 TMEM110Q86TL2 294 aa20.36■□□□□ 0.85
PKD1-230ENST00000565639 METTL23Q86XA0 190 aa20.36■□□□□ 0.85
PKD1-230ENST00000565639 ZNF280BQ86YH2 543 aa20.36■□□□□ 0.85
PKD1-230ENST00000565639 COLGALT2Q8IYK4 626 aa20.36■□□□□ 0.85
PKD1-230ENST00000565639 CRIPAKQ8N1N5 446 aa20.36■□□□□ 0.85
PKD1-230ENST00000565639 MMGT1Q8N4V1 131 aa20.36■□□□□ 0.85
PKD1-230ENST00000565639 FNIP1Q8TF40 1166 aa20.36■□□□□ 0.85
PKD1-230ENST00000565639 KRT35Q92764 455 aa20.36■□□□□ 0.85
PKD1-230ENST00000565639 SUSD3Q96L08 255 aa20.36■□□□□ 0.85
PKD1-230ENST00000565639 LPIN3Q9BQK8 851 aa20.36■□□□□ 0.85
PKD1-230ENST00000565639 ST7Q9NRC1 585 aa20.36■□□□□ 0.85
PKD1-230ENST00000565639 TTC3P53804 2025 aa20.36■□□□□ 0.85
PKD1-230ENST00000565639 SCN5AQ14524 2016 aa20.36■□□□□ 0.85
PKD1-230ENST00000565639 GJB6O95452 261 aa20.35■□□□□ 0.85
PKD1-230ENST00000565639 PCSK1P29120 753 aa20.35■□□□□ 0.85
PKD1-230ENST00000565639 PIGHQ14442 188 aaPredicted RBP20.35■□□□□ 0.85
PKD1-230ENST00000565639 TCTN1Q2MV58 587 aa20.35■□□□□ 0.85
PKD1-230ENST00000565639 PMF1Q6P1K2 205 aa20.35■□□□□ 0.85
PKD1-230ENST00000565639 ABI1Q8IZP0 508 aa20.35■□□□□ 0.85
PKD1-230ENST00000565639 NIPA2Q8N8Q9 360 aa20.35■□□□□ 0.85
PKD1-230ENST00000565639 SLC2A14Q8TDB8 520 aa20.35■□□□□ 0.85
PKD1-230ENST00000565639 ANKRD7Q92527 254 aa20.35■□□□□ 0.85
PKD1-230ENST00000565639 SYT15Q9BQS2 421 aa20.35■□□□□ 0.85
PKD1-230ENST00000565639 SMARCAL1Q9NZC9 954 aa20.35■□□□□ 0.85
PKD1-230ENST00000565639 CDH9Q9ULB4 789 aa20.35■□□□□ 0.85
PKD1-230ENST00000565639 LRFN2Q9ULH4 789 aa20.35■□□□□ 0.85
PKD1-230ENST00000565639 GOLGA8SH3BPF8 625 aa20.35■□□□□ 0.85
PKD1-230ENST00000565639 CLTBP09497 229 aa20.35■□□□□ 0.85
PKD1-230ENST00000565639 TYMPP19971 482 aa20.35■□□□□ 0.85
PKD1-230ENST00000565639 ADORA2BP29275 332 aa20.35■□□□□ 0.85
PKD1-230ENST00000565639 BRCC3P46736 316 aa20.35■□□□□ 0.85
PKD1-230ENST00000565639 RPL34P49207 117 aaKnown RBP20.35■□□□□ 0.85
PKD1-230ENST00000565639 RNASELQ05823 741 aaKnown RBP20.35■□□□□ 0.85
PKD1-230ENST00000565639 CPNE8Q86YQ8 564 aa20.35■□□□□ 0.85
PKD1-230ENST00000565639 PAWRQ96IZ0 340 aaKnown RBP20.35■□□□□ 0.85
PKD1-230ENST00000565639 FAM193BQ96PV7 902 aaPredicted RBP20.35■□□□□ 0.85
PKD1-230ENST00000565639 TMEM39AQ9NV64 488 aa20.35■□□□□ 0.85
PKD1-230ENST00000565639 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.34■□□□□ 0.85
PKD1-230ENST00000565639 E5RJQ4 531 aa20.34■□□□□ 0.85
PKD1-230ENST00000565639 B4GALT3O60512 393 aa20.34■□□□□ 0.85
PKD1-230ENST00000565639 ACAT1P24752 427 aaKnown RBP20.34■□□□□ 0.85
PKD1-230ENST00000565639 RFC2P35250 354 aa20.34■□□□□ 0.85
PKD1-230ENST00000565639 MARCKSL1P49006 195 aa20.34■□□□□ 0.85
PKD1-230ENST00000565639 RWDD2BP57060 319 aa20.34■□□□□ 0.85
PKD1-230ENST00000565639 PLCB3Q01970 1234 aa20.34■□□□□ 0.85
PKD1-230ENST00000565639 ZDHHC17Q8IUH5 632 aa20.34■□□□□ 0.85
PKD1-230ENST00000565639 FUKQ8N0W3 1084 aa20.34■□□□□ 0.85
PKD1-230ENST00000565639 HSFY1Q96LI6 401 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms