RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 TFAMQ00059 246 aaKnown RBP16.79■□□□□ 0.28
USB1-208ENST00000563207 PFKPQ01813 784 aa16.79■□□□□ 0.28
USB1-208ENST00000563207 BFSP1Q12934 665 aa16.79■□□□□ 0.28
USB1-208ENST00000563207 GIPC2Q8TF65 315 aa16.79■□□□□ 0.28
USB1-208ENST00000563207 CCDC127Q96BQ5 260 aa16.79■□□□□ 0.28
USB1-208ENST00000563207 MAFFQ9ULX9 164 aa16.79■□□□□ 0.28
USB1-208ENST00000563207 KIF26AQ9ULI4 1882 aaPredicted RBP16.79■□□□□ 0.28
USB1-208ENST00000563207 STX10O60499 249 aa16.78■□□□□ 0.28
USB1-208ENST00000563207 CCDC192P0DO97 292 aa16.78■□□□□ 0.28
USB1-208ENST00000563207 DLATP10515 647 aaKnown RBP16.78■□□□□ 0.28
USB1-208ENST00000563207 PNPLA4P41247 253 aa16.78■□□□□ 0.28
USB1-208ENST00000563207 ALDH1A3P47895 512 aa16.78■□□□□ 0.28
USB1-208ENST00000563207 GPR15P49685 360 aa16.78■□□□□ 0.28
USB1-208ENST00000563207 VAMP7P51809 220 aa16.78■□□□□ 0.28
USB1-208ENST00000563207 EPHB3P54753 998 aa16.78■□□□□ 0.28
USB1-208ENST00000563207 STX17P56962 302 aa16.78■□□□□ 0.28
USB1-208ENST00000563207 CYP4F8P98187 520 aa16.78■□□□□ 0.28
USB1-208ENST00000563207 WDR44Q5JSH3 913 aa16.78■□□□□ 0.28
USB1-208ENST00000563207 LMBRD2Q68DH5 695 aaPredicted RBP16.78■□□□□ 0.28
USB1-208ENST00000563207 DCLK2Q8N568 766 aa16.78■□□□□ 0.28
USB1-208ENST00000563207 TTC8Q8TAM2 541 aa16.78■□□□□ 0.28
USB1-208ENST00000563207 CXorf38Q8TB03 319 aa16.78■□□□□ 0.28
USB1-208ENST00000563207 CLDN23Q96B33 292 aa16.78■□□□□ 0.28
USB1-208ENST00000563207 ZFYVE19Q96K21 471 aa16.78■□□□□ 0.28
USB1-208ENST00000563207 SEPT5Q99719 369 aaPredicted RBP16.78■□□□□ 0.28
USB1-208ENST00000563207 NAT10Q9H0A0 1025 aaKnown RBP16.78■□□□□ 0.28
USB1-208ENST00000563207 SLITRK6Q9H5Y7 841 aa16.78■□□□□ 0.28
USB1-208ENST00000563207 ARMCX3Q9UH62 379 aaPredicted RBP16.78■□□□□ 0.28
USB1-208ENST00000563207 R3HCC1Q9Y3T6 440 aaKnown RBP16.78■□□□□ 0.28
USB1-208ENST00000563207 PTPRJQ12913 1337 aa16.77■□□□□ 0.28
USB1-208ENST00000563207 KPNA7A9QM74 516 aa16.77■□□□□ 0.28
USB1-208ENST00000563207 ARNTLO00327 626 aa16.77■□□□□ 0.28
USB1-208ENST00000563207 ITGB3P05106 788 aa16.77■□□□□ 0.28
USB1-208ENST00000563207 PSMC3P17980 439 aa16.77■□□□□ 0.28
USB1-208ENST00000563207 GABRR2P28476 465 aa16.77■□□□□ 0.28
USB1-208ENST00000563207 POLR2BP30876 1174 aaKnown RBP16.77■□□□□ 0.28
USB1-208ENST00000563207 HOXC13P31276 330 aa16.77■□□□□ 0.28
USB1-208ENST00000563207 GTF2H1P32780 548 aa16.77■□□□□ 0.28
USB1-208ENST00000563207 SOX9P48436 509 aa16.77■□□□□ 0.28
USB1-208ENST00000563207 TAF6P49848 677 aa16.77■□□□□ 0.28
USB1-208ENST00000563207 MARSP56192 900 aaKnown RBP16.77■□□□□ 0.28
USB1-208ENST00000563207 RBP5P82980 135 aa16.77■□□□□ 0.28
USB1-208ENST00000563207 CSTF1Q05048 431 aaKnown RBP16.77■□□□□ 0.28
USB1-208ENST00000563207 TYRO3Q06418 890 aa16.77■□□□□ 0.28
USB1-208ENST00000563207 TPD52L1Q16890 204 aaPredicted RBP16.77■□□□□ 0.28
USB1-208ENST00000563207 MGAT5BQ3V5L5 792 aa16.77■□□□□ 0.28
USB1-208ENST00000563207 SDHAF4Q5VUM1 108 aa16.77■□□□□ 0.28
USB1-208ENST00000563207 ARID3BQ8IVW6 561 aaPredicted RBP16.77■□□□□ 0.28
USB1-208ENST00000563207 LRRC52Q8N7C0 313 aa16.77■□□□□ 0.28
USB1-208ENST00000563207 C1orf127Q8N9H9 656 aa16.77■□□□□ 0.28
USB1-208ENST00000563207 ENOX1Q8TC92 643 aaKnown RBP16.77■□□□□ 0.28
USB1-208ENST00000563207 PSMG2Q969U7 264 aa16.77■□□□□ 0.28
USB1-208ENST00000563207 ZNF560Q96MR9 790 aa16.77■□□□□ 0.28
USB1-208ENST00000563207 SRRTQ9BXP5 876 aaKnown RBP16.77■□□□□ 0.28
USB1-208ENST00000563207 OXCT2Q9BYC2 517 aaPredicted RBP16.77■□□□□ 0.28
USB1-208ENST00000563207 BCO2Q9BYV7 579 aa16.77■□□□□ 0.28
USB1-208ENST00000563207 SMG9Q9H0W8 520 aaKnown RBP16.77■□□□□ 0.28
USB1-208ENST00000563207 GZF1Q9H116 711 aaPredicted RBP16.77■□□□□ 0.28
USB1-208ENST00000563207 TRPV4Q9HBA0 871 aa16.77■□□□□ 0.28
USB1-208ENST00000563207 IL21Q9HBE4 155 aa16.77■□□□□ 0.28
USB1-208ENST00000563207 AGAP1Q9UPQ3 857 aa16.77■□□□□ 0.28
USB1-208ENST00000563207 ZNF292O60281 2723 aa16.77■□□□□ 0.28
USB1-208ENST00000563207 RIF1Q5UIP0 2472 aaKnown RBP16.76■□□□□ 0.27
USB1-208ENST00000563207 NUP210Q8TEM1 1887 aaPredicted RBP16.76■□□□□ 0.27
USB1-208ENST00000563207 LRRIQ3A6PVS8 624 aaPredicted RBP16.76■□□□□ 0.27
USB1-208ENST00000563207 PRAMEF12O95522 483 aa16.76■□□□□ 0.27
USB1-208ENST00000563207 ACAT1P24752 427 aaKnown RBP16.76■□□□□ 0.27
USB1-208ENST00000563207 MTAPQ13126 283 aa16.76■□□□□ 0.27
USB1-208ENST00000563207 ZNF852Q6ZMS4 543 aa16.76■□□□□ 0.27
USB1-208ENST00000563207 TRAPPC11Q7Z392 1133 aa16.76■□□□□ 0.27
USB1-208ENST00000563207 OSTM1Q86WC4 334 aa16.76■□□□□ 0.27
USB1-208ENST00000563207 MFSD6LQ8IWD5 586 aa16.76■□□□□ 0.27
USB1-208ENST00000563207 FAM114A1Q8IWE2 563 aa16.76■□□□□ 0.27
USB1-208ENST00000563207 LEMD2Q8NC56 503 aa16.76■□□□□ 0.27
USB1-208ENST00000563207 OR5B17Q8NGF7 314 aa16.76■□□□□ 0.27
USB1-208ENST00000563207 FAM200AQ8TCP9 573 aa16.76■□□□□ 0.27
USB1-208ENST00000563207 OSBPL6Q9BZF3 934 aa16.76■□□□□ 0.27
USB1-208ENST00000563207 MTMR12Q9C0I1 747 aa16.76■□□□□ 0.27
USB1-208ENST00000563207 ATXN3LQ9H3M9 355 aa16.76■□□□□ 0.27
USB1-208ENST00000563207 ABI2Q9NYB9 513 aaPredicted RBP16.76■□□□□ 0.27
USB1-208ENST00000563207 SIX4Q9UIU6 781 aa16.76■□□□□ 0.27
USB1-208ENST00000563207 L1RE1Q9UN81 338 aa16.76■□□□□ 0.27
USB1-208ENST00000563207 PIAS3Q9Y6X2 628 aa16.76■□□□□ 0.27
USB1-208ENST00000563207 DENND4CQ5VZ89 1909 aa16.76■□□□□ 0.27
USB1-208ENST00000563207 OBSL1O75147 1896 aa16.76■□□□□ 0.27
USB1-208ENST00000563207 PTPRZ1P23471 2315 aaPredicted RBP16.75■□□□□ 0.27
USB1-208ENST00000563207 SLC38A8A6NNN8 435 aa16.75■□□□□ 0.27
USB1-208ENST00000563207 ZNF263O14978 683 aa16.75■□□□□ 0.27
USB1-208ENST00000563207 LAMTOR5O43504 91 aa16.75■□□□□ 0.27
USB1-208ENST00000563207 CAVIN2O95810 425 aa16.75■□□□□ 0.27
USB1-208ENST00000563207 LMNAP02545 664 aaKnown RBP16.75■□□□□ 0.27
USB1-208ENST00000563207 PRKCSHP14314 528 aaPredicted RBP16.75■□□□□ 0.27
USB1-208ENST00000563207 PLD1Q13393 1074 aa16.75■□□□□ 0.27
USB1-208ENST00000563207 SV2CQ496J9 727 aa16.75■□□□□ 0.27
USB1-208ENST00000563207 CCDC40Q4G0X9 1142 aa16.75■□□□□ 0.27
USB1-208ENST00000563207 GPR158Q5T848 1215 aa16.75■□□□□ 0.27
USB1-208ENST00000563207 TMEM150AQ86TG1 271 aa16.75■□□□□ 0.27
USB1-208ENST00000563207 METTL23Q86XA0 190 aa16.75■□□□□ 0.27
USB1-208ENST00000563207 PDCL2Q8N4E4 241 aa16.75■□□□□ 0.27
USB1-208ENST00000563207 PLEKHO2Q8TD55 490 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms