RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 ANK1P16157 1881 aa13.95□□□□□ -0.18
SF3B3-202ENST00000562722 TCHHQ07283 1943 aa13.94□□□□□ -0.18
SF3B3-202ENST00000562722 TRAV19A0A0A6YYK7 116 aa13.94□□□□□ -0.18
SF3B3-202ENST00000562722 OTOL1A6NHN0 477 aaPredicted RBP13.94□□□□□ -0.18
SF3B3-202ENST00000562722 TRDMT1O14717 391 aaKnown RBP13.94□□□□□ -0.18
SF3B3-202ENST00000562722 EGFP01133 1207 aa13.94□□□□□ -0.18
SF3B3-202ENST00000562722 ADRB1P08588 477 aa13.94□□□□□ -0.18
SF3B3-202ENST00000562722 GARTP22102 1010 aa13.94□□□□□ -0.18
SF3B3-202ENST00000562722 PCSK1P29120 753 aa13.94□□□□□ -0.18
SF3B3-202ENST00000562722 IFNAR2P48551 515 aa13.94□□□□□ -0.18
SF3B3-202ENST00000562722 CASP5P51878 434 aa13.94□□□□□ -0.18
SF3B3-202ENST00000562722 PSMD2Q13200 908 aa13.94□□□□□ -0.18
SF3B3-202ENST00000562722 ALCAMQ13740 583 aa13.94□□□□□ -0.18
SF3B3-202ENST00000562722 MTF1Q14872 753 aa13.94□□□□□ -0.18
SF3B3-202ENST00000562722 CCDC6Q16204 474 aa13.94□□□□□ -0.18
SF3B3-202ENST00000562722 CCDC73Q6ZRK6 1079 aa13.94□□□□□ -0.18
SF3B3-202ENST00000562722 LEO1Q8WVC0 666 aaPredicted RBP13.94□□□□□ -0.18
SF3B3-202ENST00000562722 DNAJC19Q96DA6 116 aa13.94□□□□□ -0.18
SF3B3-202ENST00000562722 P2RY13Q9BPV8 354 aa13.94□□□□□ -0.18
SF3B3-202ENST00000562722 CBWD1Q9BRT8 395 aa13.94□□□□□ -0.18
SF3B3-202ENST00000562722 STRA6Q9BX79 667 aa13.94□□□□□ -0.18
SF3B3-202ENST00000562722 PANK2Q9BZ23 570 aa13.94□□□□□ -0.18
SF3B3-202ENST00000562722 MTMR12Q9C0I1 747 aa13.94□□□□□ -0.18
SF3B3-202ENST00000562722 PDE11AQ9HCR9 933 aa13.94□□□□□ -0.18
SF3B3-202ENST00000562722 ABCB6Q9NP58 842 aa13.94□□□□□ -0.18
SF3B3-202ENST00000562722 PANK4Q9NVE7 773 aa13.94□□□□□ -0.18
SF3B3-202ENST00000562722 DUS2Q9NX74 493 aaKnown RBP13.94□□□□□ -0.18
SF3B3-202ENST00000562722 SRPRBQ9Y5M8 271 aaKnown RBP13.94□□□□□ -0.18
SF3B3-202ENST00000562722 SOBPA7XYQ1 873 aa13.93□□□□□ -0.18
SF3B3-202ENST00000562722 NOL4O94818 638 aa13.93□□□□□ -0.18
SF3B3-202ENST00000562722 USP17L7P0C7H9 530 aa13.93□□□□□ -0.18
SF3B3-202ENST00000562722 DRD1P21728 446 aa13.93□□□□□ -0.18
SF3B3-202ENST00000562722 LHX1P48742 406 aa13.93□□□□□ -0.18
SF3B3-202ENST00000562722 GALK1P51570 392 aa13.93□□□□□ -0.18
SF3B3-202ENST00000562722 FAM160A1Q05DH4 1040 aa13.93□□□□□ -0.18
SF3B3-202ENST00000562722 MYO1EQ12965 1108 aa13.93□□□□□ -0.18
SF3B3-202ENST00000562722 ZNF268Q14587 947 aaPredicted RBP13.93□□□□□ -0.18
SF3B3-202ENST00000562722 KCNB1Q14721 858 aa13.93□□□□□ -0.18
SF3B3-202ENST00000562722 SF3A2Q15428 464 aaKnown RBP13.93□□□□□ -0.18
SF3B3-202ENST00000562722 LMBRD2Q68DH5 695 aaPredicted RBP13.93□□□□□ -0.18
SF3B3-202ENST00000562722 FAM173BQ6P4H8 233 aa13.93□□□□□ -0.18
SF3B3-202ENST00000562722 KBTBD6Q86V97 674 aa13.93□□□□□ -0.18
SF3B3-202ENST00000562722 TOP6BLQ8N6T0 577 aa13.93□□□□□ -0.18
SF3B3-202ENST00000562722 FSIP1Q8NA03 581 aa13.93□□□□□ -0.18
SF3B3-202ENST00000562722 RIN3Q8TB24 985 aa13.93□□□□□ -0.18
SF3B3-202ENST00000562722 CHFRQ96EP1 664 aa13.93□□□□□ -0.18
SF3B3-202ENST00000562722 ANKRD36BP1Q96IX9 119 aa13.93□□□□□ -0.18
SF3B3-202ENST00000562722 HHIPQ96QV1 700 aa13.93□□□□□ -0.18
SF3B3-202ENST00000562722 CYP2S1Q96SQ9 504 aa13.93□□□□□ -0.18
SF3B3-202ENST00000562722 TMEM206Q9H813 350 aa13.93□□□□□ -0.18
SF3B3-202ENST00000562722 ECT2Q9H8V3 914 aa13.93□□□□□ -0.18
SF3B3-202ENST00000562722 OLFML3Q9NRN5 406 aa13.93□□□□□ -0.18
SF3B3-202ENST00000562722 POLR3BQ9NW08 1133 aaPredicted RBP13.93□□□□□ -0.18
SF3B3-202ENST00000562722 WNT6Q9Y6F9 365 aa13.93□□□□□ -0.18
SF3B3-202ENST00000562722 CCDC163A0A0D9SF12 145 aa13.92□□□□□ -0.18
SF3B3-202ENST00000562722 HCRTO43612 131 aa13.92□□□□□ -0.18
SF3B3-202ENST00000562722 TADA3O75528 432 aa13.92□□□□□ -0.18
SF3B3-202ENST00000562722 PRPF6O94906 941 aaKnown RBP13.92□□□□□ -0.18
SF3B3-202ENST00000562722 EPN2O95208 641 aa13.92□□□□□ -0.18
SF3B3-202ENST00000562722 TNNC2P02585 160 aa13.92□□□□□ -0.18
SF3B3-202ENST00000562722 CENPBP07199 599 aaPredicted RBP13.92□□□□□ -0.18
SF3B3-202ENST00000562722 GJA4P35212 333 aa13.92□□□□□ -0.18
SF3B3-202ENST00000562722 CCDC142Q17RM4 750 aa13.92□□□□□ -0.18
SF3B3-202ENST00000562722 NAIF1Q69YI7 327 aaPredicted RBP13.92□□□□□ -0.18
SF3B3-202ENST00000562722 C4orf50Q6ZRC1 276 aa13.92□□□□□ -0.18
SF3B3-202ENST00000562722 OSTM1Q86WC4 334 aa13.92□□□□□ -0.18
SF3B3-202ENST00000562722 CCDC65Q8IXS2 484 aa13.92□□□□□ -0.18
SF3B3-202ENST00000562722 GPD1LQ8N335 351 aa13.92□□□□□ -0.18
SF3B3-202ENST00000562722 RPLP0P6Q8NHW5 317 aa13.92□□□□□ -0.18
SF3B3-202ENST00000562722 OSCP1Q8WVF1 389 aa13.92□□□□□ -0.18
SF3B3-202ENST00000562722 DDX1Q92499 740 aaKnown RBP13.92□□□□□ -0.18
SF3B3-202ENST00000562722 ATP2A3Q93084 1043 aa13.92□□□□□ -0.18
SF3B3-202ENST00000562722 TRMT2BQ96GJ1 504 aaKnown RBP13.92□□□□□ -0.18
SF3B3-202ENST00000562722 LOXL4Q96JB6 756 aa13.92□□□□□ -0.18
SF3B3-202ENST00000562722 CHAMP1Q96JM3 812 aa13.92□□□□□ -0.18
SF3B3-202ENST00000562722 FGFBP2Q9BYJ0 223 aa13.92□□□□□ -0.18
SF3B3-202ENST00000562722 FBRSL1Q9HCM7 1045 aaKnown RBP13.92□□□□□ -0.18
SF3B3-202ENST00000562722 GDAP2Q9NXN4 497 aa13.92□□□□□ -0.18
SF3B3-202ENST00000562722 KIF26AQ9ULI4 1882 aaPredicted RBP13.91□□□□□ -0.18
SF3B3-202ENST00000562722 ANXA13P27216 316 aa13.91□□□□□ -0.18
SF3B3-202ENST00000562722 PSMC1P62191 440 aaKnown RBP13.91□□□□□ -0.18
SF3B3-202ENST00000562722 CYP27A1Q02318 531 aa13.91□□□□□ -0.18
SF3B3-202ENST00000562722 RESTQ13127 1097 aa13.91□□□□□ -0.18
SF3B3-202ENST00000562722 NR1H3Q13133 447 aa13.91□□□□□ -0.18
SF3B3-202ENST00000562722 ZNF77Q15935 545 aa13.91□□□□□ -0.18
SF3B3-202ENST00000562722 SOWAHAQ2M3V2 549 aa13.91□□□□□ -0.18
SF3B3-202ENST00000562722 CFAP221Q4G0U5 840 aa13.91□□□□□ -0.18
SF3B3-202ENST00000562722 FBXO43Q4G163 708 aa13.91□□□□□ -0.18
SF3B3-202ENST00000562722 SCARA3Q6AZY7 606 aa13.91□□□□□ -0.18
SF3B3-202ENST00000562722 STXBP4Q6ZWJ1 553 aa13.91□□□□□ -0.18
SF3B3-202ENST00000562722 CAMKK1Q8N5S9 505 aa13.91□□□□□ -0.18
SF3B3-202ENST00000562722 PDILTQ8N807 584 aa13.91□□□□□ -0.18
SF3B3-202ENST00000562722 ARL14EPQ8N8R7 260 aaPredicted RBP13.91□□□□□ -0.18
SF3B3-202ENST00000562722 SPATA18Q8TC71 538 aa13.91□□□□□ -0.18
SF3B3-202ENST00000562722 SH3RF2Q8TEC5 729 aa13.91□□□□□ -0.18
SF3B3-202ENST00000562722 CD101Q93033 1021 aa13.91□□□□□ -0.18
SF3B3-202ENST00000562722 ACDQ96AP0 544 aa13.91□□□□□ -0.18
SF3B3-202ENST00000562722 FUBP3Q96I24 572 aaKnown RBP eCLIP13.91□□□□□ -0.18
SF3B3-202ENST00000562722 HPDLQ96IR7 371 aa13.91□□□□□ -0.18
SF3B3-202ENST00000562722 SLC22A12Q96S37 553 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms