RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 CCR3P51677 355 aa10.02□□□□□ -0.81
YBX3-218ENST00000546298 NRLP54845 237 aa10.02□□□□□ -0.81
YBX3-218ENST00000546298 TNNC1P63316 161 aa10.02□□□□□ -0.81
YBX3-218ENST00000546298 AMPD2Q01433 879 aa10.02□□□□□ -0.81
YBX3-218ENST00000546298 MTAPQ13126 283 aa10.02□□□□□ -0.81
YBX3-218ENST00000546298 CUL4BQ13620 913 aa10.02□□□□□ -0.81
YBX3-218ENST00000546298 PKP1Q13835 747 aa10.02□□□□□ -0.81
YBX3-218ENST00000546298 ITPRIPL2Q3MIP1 535 aa10.02□□□□□ -0.81
YBX3-218ENST00000546298 CC2D1AQ6P1N0 951 aaPredicted RBP10.02□□□□□ -0.81
YBX3-218ENST00000546298 FAM171BQ6P995 826 aa10.02□□□□□ -0.81
YBX3-218ENST00000546298 VSTM1Q6UX27 236 aa10.02□□□□□ -0.81
YBX3-218ENST00000546298 MAML2Q8IZL2 1156 aaPredicted RBP10.02□□□□□ -0.81
YBX3-218ENST00000546298 MAB21L3Q8N8X9 362 aa10.02□□□□□ -0.81
YBX3-218ENST00000546298 FSIP1Q8NA03 581 aa10.02□□□□□ -0.81
YBX3-218ENST00000546298 OR6B3Q8NGW1 331 aa10.02□□□□□ -0.81
YBX3-218ENST00000546298 EXOC4Q96A65 974 aa10.02□□□□□ -0.81
YBX3-218ENST00000546298 TRMT2BQ96GJ1 504 aaKnown RBP10.02□□□□□ -0.81
YBX3-218ENST00000546298 PAGE5Q96GU1 130 aa10.02□□□□□ -0.81
YBX3-218ENST00000546298 FAM84AQ96KN4 292 aa10.02□□□□□ -0.81
YBX3-218ENST00000546298 MYRFLQ96LU7 910 aa10.02□□□□□ -0.81
YBX3-218ENST00000546298 PKMYT1Q99640 499 aa10.02□□□□□ -0.81
YBX3-218ENST00000546298 TDP1Q9NUW8 608 aa10.02□□□□□ -0.81
YBX3-218ENST00000546298 SPECC1L-ADORA2AF8WAN1 911 aa10.01□□□□□ -0.81
YBX3-218ENST00000546298 TACC1O75410 805 aa10.01□□□□□ -0.81
YBX3-218ENST00000546298 PRAMEF12O95522 483 aa10.01□□□□□ -0.81
YBX3-218ENST00000546298 STAU1O95793 577 aaKnown RBP10.01□□□□□ -0.81
YBX3-218ENST00000546298 CST3P01034 146 aaPredicted RBP10.01□□□□□ -0.81
YBX3-218ENST00000546298 PDGFRBP09619 1106 aa10.01□□□□□ -0.81
YBX3-218ENST00000546298 CHRNB1P11230 501 aa10.01□□□□□ -0.81
YBX3-218ENST00000546298 ANXA13P27216 316 aa10.01□□□□□ -0.81
YBX3-218ENST00000546298 CASP1P29466 404 aa10.01□□□□□ -0.81
YBX3-218ENST00000546298 CTHP32929 405 aa10.01□□□□□ -0.81
YBX3-218ENST00000546298 GRIK1P39086 918 aa10.01□□□□□ -0.81
YBX3-218ENST00000546298 CXCL12P48061 93 aa10.01□□□□□ -0.81
YBX3-218ENST00000546298 GPR15P49685 360 aa10.01□□□□□ -0.81
YBX3-218ENST00000546298 PDE6CP51160 858 aa10.01□□□□□ -0.81
YBX3-218ENST00000546298 ZNF268Q14587 947 aaPredicted RBP10.01□□□□□ -0.81
YBX3-218ENST00000546298 WDR72Q3MJ13 1102 aa10.01□□□□□ -0.81
YBX3-218ENST00000546298 SDHAF4Q5VUM1 108 aa10.01□□□□□ -0.81
YBX3-218ENST00000546298 TXNDC8Q6A555 127 aa10.01□□□□□ -0.81
YBX3-218ENST00000546298 TMEM150AQ86TG1 271 aa10.01□□□□□ -0.81
YBX3-218ENST00000546298 ZNF687Q8N1G0 1237 aa10.01□□□□□ -0.81
YBX3-218ENST00000546298 SYNPOQ8N3V7 929 aa10.01□□□□□ -0.81
YBX3-218ENST00000546298 SPEM1Q8N4L4 309 aa10.01□□□□□ -0.81
YBX3-218ENST00000546298 ZBTB44Q8NCP5 570 aa10.01□□□□□ -0.81
YBX3-218ENST00000546298 KBTBD7Q8WVZ9 684 aa10.01□□□□□ -0.81
YBX3-218ENST00000546298 RUBCNQ92622 972 aa10.01□□□□□ -0.81
YBX3-218ENST00000546298 SECISBP2LQ93073 1101 aaKnown RBP10.01□□□□□ -0.81
YBX3-218ENST00000546298 SYAP1Q96A49 352 aaPredicted RBP10.01□□□□□ -0.81
YBX3-218ENST00000546298 CCDC34Q96HJ3 373 aa10.01□□□□□ -0.81
YBX3-218ENST00000546298 LRRC3BQ96PB8 259 aa10.01□□□□□ -0.81
YBX3-218ENST00000546298 HINFPQ9BQA5 517 aa10.01□□□□□ -0.81
YBX3-218ENST00000546298 SCAND2PQ9GZW5 306 aaPredicted RBP10.01□□□□□ -0.81
YBX3-218ENST00000546298 PRMT8Q9NR22 394 aaPredicted RBP10.01□□□□□ -0.81
YBX3-218ENST00000546298 GKN1Q9NS71 199 aa10.01□□□□□ -0.81
YBX3-218ENST00000546298 PTPRJQ12913 1337 aa10.01□□□□□ -0.81
YBX3-218ENST00000546298 TRIP11Q15643 1979 aa10.01□□□□□ -0.81
YBX3-218ENST00000546298 TRAV19A0A0A6YYK7 116 aa10□□□□□ -0.81
YBX3-218ENST00000546298 A0A1B0GVL5 298 aa10□□□□□ -0.81
YBX3-218ENST00000546298 PDXKO00764 312 aa10□□□□□ -0.81
YBX3-218ENST00000546298 TRIM66O15016 1216 aa10□□□□□ -0.81
YBX3-218ENST00000546298 ACTN4O43707 911 aaKnown RBP10□□□□□ -0.81
YBX3-218ENST00000546298 KLRC4O43908 158 aa10□□□□□ -0.81
YBX3-218ENST00000546298 ATP2C2O75185 946 aa10□□□□□ -0.81
YBX3-218ENST00000546298 CLSTN1O94985 981 aa10□□□□□ -0.81
YBX3-218ENST00000546298 USP17L7P0C7H9 530 aa10□□□□□ -0.81
YBX3-218ENST00000546298 PFKFB1P16118 471 aa10□□□□□ -0.81
YBX3-218ENST00000546298 PFKLP17858 780 aa10□□□□□ -0.81
YBX3-218ENST00000546298 LMO2P25791 158 aa10□□□□□ -0.81
YBX3-218ENST00000546298 SYKP43405 635 aa10□□□□□ -0.81
YBX3-218ENST00000546298 PPP3CCP48454 512 aa10□□□□□ -0.81
YBX3-218ENST00000546298 PSMC1P62191 440 aaKnown RBP10□□□□□ -0.81
YBX3-218ENST00000546298 CYP27A1Q02318 531 aa10□□□□□ -0.81
YBX3-218ENST00000546298 FAM160A1Q05DH4 1040 aa10□□□□□ -0.81
YBX3-218ENST00000546298 STK4Q13043 487 aa10□□□□□ -0.81
YBX3-218ENST00000546298 BIRC3Q13489 604 aa10□□□□□ -0.81
YBX3-218ENST00000546298 RUNX3Q13761 415 aa10□□□□□ -0.81
YBX3-218ENST00000546298 PDGFRLQ15198 375 aa10□□□□□ -0.81
YBX3-218ENST00000546298 KMT5BQ4FZB7 885 aa10□□□□□ -0.81
YBX3-218ENST00000546298 SCARA3Q6AZY7 606 aa10□□□□□ -0.81
YBX3-218ENST00000546298 SLC9A9Q8IVB4 645 aa10□□□□□ -0.81
YBX3-218ENST00000546298 GRAMD1CQ8IYS0 662 aa10□□□□□ -0.81
YBX3-218ENST00000546298 MYCBPAPQ8TBZ2 947 aa10□□□□□ -0.81
YBX3-218ENST00000546298 TMEM174Q8WUU8 243 aa10□□□□□ -0.81
YBX3-218ENST00000546298 NELL1Q92832 810 aa10□□□□□ -0.81
YBX3-218ENST00000546298 USP13Q92995 863 aaPredicted RBP10□□□□□ -0.81
YBX3-218ENST00000546298 MYLPFQ96A32 169 aa10□□□□□ -0.81
YBX3-218ENST00000546298 ZFYVE19Q96K21 471 aa10□□□□□ -0.81
YBX3-218ENST00000546298 SPATA17Q96L03 361 aa10□□□□□ -0.81
YBX3-218ENST00000546298 FAM83CQ9BQN1 747 aa10□□□□□ -0.81
YBX3-218ENST00000546298 SMG9Q9H0W8 520 aaKnown RBP10□□□□□ -0.81
YBX3-218ENST00000546298 TRPC7Q9HCX4 862 aa10□□□□□ -0.81
YBX3-218ENST00000546298 CRTAC1Q9NQ79 661 aa10□□□□□ -0.81
YBX3-218ENST00000546298 GTSE1Q9NYZ3 720 aa10□□□□□ -0.81
YBX3-218ENST00000546298 GTF3C3Q9Y5Q9 886 aa10□□□□□ -0.81
YBX3-218ENST00000546298 MYH11P35749 1972 aa10□□□□□ -0.81
YBX3-218ENST00000546298 DOCK6Q96HP0 2047 aa10□□□□□ -0.81
YBX3-218ENST00000546298 NCANO14594 1321 aa10□□□□□ -0.81
YBX3-218ENST00000546298 F5P12259 2224 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 NOTCH4Q99466 2003 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms