RNA–Protein interactions for RNA: ENST00000542641.5

YBX3-213, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-213ENST00000542641 ABLIM3O94929 683 aa12.32□□□□□ -0.44
YBX3-213ENST00000542641 GLUD1P00367 558 aa12.32□□□□□ -0.44
YBX3-213ENST00000542641 CALCAP01258 141 aa12.32□□□□□ -0.44
YBX3-213ENST00000542641 SPATA31D3P0C874 917 aa12.32□□□□□ -0.44
YBX3-213ENST00000542641 VDRP11473 427 aa12.32□□□□□ -0.44
YBX3-213ENST00000542641 ATF2P15336 505 aa12.32□□□□□ -0.44
YBX3-213ENST00000542641 CDC25BP30305 580 aa12.32□□□□□ -0.44
YBX3-213ENST00000542641 CASP14P31944 242 aa12.32□□□□□ -0.44
YBX3-213ENST00000542641 ELF1P32519 619 aa12.32□□□□□ -0.44
YBX3-213ENST00000542641 CLCN1P35523 988 aa12.32□□□□□ -0.44
YBX3-213ENST00000542641 CLCN4P51793 760 aa12.32□□□□□ -0.44
YBX3-213ENST00000542641 BPIFB4P59827 614 aa12.32□□□□□ -0.44
YBX3-213ENST00000542641 ZBED6P86452 979 aa12.32□□□□□ -0.44
YBX3-213ENST00000542641 ARID5AQ03989 594 aa12.32□□□□□ -0.44
YBX3-213ENST00000542641 DUSP6Q16828 381 aa12.32□□□□□ -0.44
YBX3-213ENST00000542641 SGO2Q562F6 1265 aa12.32□□□□□ -0.44
YBX3-213ENST00000542641 TCEAL5Q5H9L2 206 aa12.32□□□□□ -0.44
YBX3-213ENST00000542641 LILRA6Q6PI73 481 aa12.32□□□□□ -0.44
YBX3-213ENST00000542641 C4orf50Q6ZRC1 276 aa12.32□□□□□ -0.44
YBX3-213ENST00000542641 SPATA31D4Q6ZUB0 917 aa12.32□□□□□ -0.44
YBX3-213ENST00000542641 FMNL3Q8IVF7 1028 aa12.32□□□□□ -0.44
YBX3-213ENST00000542641 C2orf15Q8WU43 125 aaKnown RBP12.32□□□□□ -0.44
YBX3-213ENST00000542641 MYLPFQ96A32 169 aa12.32□□□□□ -0.44
YBX3-213ENST00000542641 CYFIP2Q96F07 1278 aa12.32□□□□□ -0.44
YBX3-213ENST00000542641 PCED1BQ96HM7 432 aa12.32□□□□□ -0.44
YBX3-213ENST00000542641 CDCA3Q99618 268 aaPredicted RBP12.32□□□□□ -0.44
YBX3-213ENST00000542641 CDX2Q99626 313 aaPredicted RBP12.32□□□□□ -0.44
YBX3-213ENST00000542641 MED10Q9BTT4 135 aa12.32□□□□□ -0.44
YBX3-213ENST00000542641 B3GNT5Q9BYG0 378 aa12.32□□□□□ -0.44
YBX3-213ENST00000542641 NUCKS1Q9H1E3 243 aaKnown RBP12.32□□□□□ -0.44
YBX3-213ENST00000542641 IGFLR1Q9H665 355 aa12.32□□□□□ -0.44
YBX3-213ENST00000542641 ACP6Q9NPH0 428 aa12.32□□□□□ -0.44
YBX3-213ENST00000542641 ABI2Q9NYB9 513 aaPredicted RBP12.32□□□□□ -0.44
YBX3-213ENST00000542641 AFF4Q9UHB7 1163 aaKnown RBP12.32□□□□□ -0.44
YBX3-213ENST00000542641 TSC2P49815 1807 aa12.32□□□□□ -0.44
YBX3-213ENST00000542641 TRANK1O15050 2925 aa12.31□□□□□ -0.44
YBX3-213ENST00000542641 MTMR11A4FU01 709 aa12.31□□□□□ -0.44
YBX3-213ENST00000542641 CLDN5O00501 218 aa12.31□□□□□ -0.44
YBX3-213ENST00000542641 THAP12O43422 761 aa12.31□□□□□ -0.44
YBX3-213ENST00000542641 C1RP00736 705 aa12.31□□□□□ -0.44
YBX3-213ENST00000542641 CCDC172P0C7W6 258 aa12.31□□□□□ -0.44
YBX3-213ENST00000542641 CCDC130P13994 396 aa12.31□□□□□ -0.44
YBX3-213ENST00000542641 CYP11B1P15538 503 aa12.31□□□□□ -0.44
YBX3-213ENST00000542641 FERP16591 822 aa12.31□□□□□ -0.44
YBX3-213ENST00000542641 BDNFP23560 247 aa12.31□□□□□ -0.44
YBX3-213ENST00000542641 ADORA2BP29275 332 aa12.31□□□□□ -0.44
YBX3-213ENST00000542641 GNA15P30679 374 aa12.31□□□□□ -0.44
YBX3-213ENST00000542641 KRT9P35527 623 aa12.31□□□□□ -0.44
YBX3-213ENST00000542641 ADCY1Q08828 1119 aa12.31□□□□□ -0.44
YBX3-213ENST00000542641 DUSP4Q13115 394 aa12.31□□□□□ -0.44
YBX3-213ENST00000542641 TBX2Q13207 712 aaPredicted RBP12.31□□□□□ -0.44
YBX3-213ENST00000542641 PPP1R26Q5T8A7 1209 aaPredicted RBP12.31□□□□□ -0.44
YBX3-213ENST00000542641 SFMBT2Q5VUG0 894 aa12.31□□□□□ -0.44
YBX3-213ENST00000542641 LLGL2Q6P1M3 1020 aa12.31□□□□□ -0.44
YBX3-213ENST00000542641 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.31□□□□□ -0.44
YBX3-213ENST00000542641 SLC47A2Q86VL8 602 aa12.31□□□□□ -0.44
YBX3-213ENST00000542641 GPIHBP1Q8IV16 184 aa12.31□□□□□ -0.44
YBX3-213ENST00000542641 ATAD1Q8NBU5 361 aa12.31□□□□□ -0.44
YBX3-213ENST00000542641 SPPL2BQ8TCT7 592 aa12.31□□□□□ -0.44
YBX3-213ENST00000542641 SLC2A14Q8TDB8 520 aa12.31□□□□□ -0.44
YBX3-213ENST00000542641 MYLIPQ8WY64 445 aa12.31□□□□□ -0.44
YBX3-213ENST00000542641 TFAP2BQ92481 460 aa12.31□□□□□ -0.44
YBX3-213ENST00000542641 ANP32BQ92688 251 aaKnown RBP12.31□□□□□ -0.44
YBX3-213ENST00000542641 HNRNPABQ99729 332 aaKnown RBP12.31□□□□□ -0.44
YBX3-213ENST00000542641 CYP4F11Q9HBI6 524 aa12.31□□□□□ -0.44
YBX3-213ENST00000542641 MAFFQ9ULX9 164 aa12.31□□□□□ -0.44
YBX3-213ENST00000542641 SLC27A5Q9Y2P5 690 aa12.31□□□□□ -0.44
YBX3-213ENST00000542641 COL4A4P53420 1690 aaPredicted RBP12.3□□□□□ -0.44
YBX3-213ENST00000542641 AKR1B15C9JRZ8 316 aaPredicted RBP12.3□□□□□ -0.44
YBX3-213ENST00000542641 PRRG1O14668 218 aa12.3□□□□□ -0.44
YBX3-213ENST00000542641 MED7O43513 233 aa12.3□□□□□ -0.44
YBX3-213ENST00000542641 VNN2O95498 520 aa12.3□□□□□ -0.44
YBX3-213ENST00000542641 EPCAMP16422 314 aa12.3□□□□□ -0.44
YBX3-213ENST00000542641 CYP2F1P24903 491 aa12.3□□□□□ -0.44
YBX3-213ENST00000542641 BRD2P25440 801 aaKnown RBP12.3□□□□□ -0.44
YBX3-213ENST00000542641 GTF2F1P35269 517 aaKnown RBP eCLIP12.3□□□□□ -0.44
YBX3-213ENST00000542641 PDE6CP51160 858 aa12.3□□□□□ -0.44
YBX3-213ENST00000542641 HYAL1Q12794 435 aa12.3□□□□□ -0.44
YBX3-213ENST00000542641 STILQ15468 1287 aa12.3□□□□□ -0.44
YBX3-213ENST00000542641 CNGA2Q16280 664 aa12.3□□□□□ -0.44
YBX3-213ENST00000542641 ASIC2Q16515 512 aa12.3□□□□□ -0.44
YBX3-213ENST00000542641 TSR1Q2NL82 804 aaKnown RBP12.3□□□□□ -0.44
YBX3-213ENST00000542641 MGAT5BQ3V5L5 792 aa12.3□□□□□ -0.44
YBX3-213ENST00000542641 CFAP221Q4G0U5 840 aa12.3□□□□□ -0.44
YBX3-213ENST00000542641 ARHGAP17Q68EM7 881 aa12.3□□□□□ -0.44
YBX3-213ENST00000542641 ELMSAN1Q6PJG2 1045 aa12.3□□□□□ -0.44
YBX3-213ENST00000542641 PAQR9Q6ZVX9 377 aa12.3□□□□□ -0.44
YBX3-213ENST00000542641 FAM35AQ86V20 835 aa12.3□□□□□ -0.44
YBX3-213ENST00000542641 CNGA4Q8IV77 575 aa12.3□□□□□ -0.44
YBX3-213ENST00000542641 TCEAL8Q8IYN2 117 aa12.3□□□□□ -0.44
YBX3-213ENST00000542641 FUKQ8N0W3 1084 aa12.3□□□□□ -0.44
YBX3-213ENST00000542641 MICALL1Q8N3F8 863 aa12.3□□□□□ -0.44
YBX3-213ENST00000542641 SPC24Q8NBT2 197 aa12.3□□□□□ -0.44
YBX3-213ENST00000542641 KREMEN2Q8NCW0 462 aa12.3□□□□□ -0.44
YBX3-213ENST00000542641 OR8K1Q8NGG5 319 aa12.3□□□□□ -0.44
YBX3-213ENST00000542641 SLC22A17Q8WUG5 538 aa12.3□□□□□ -0.44
YBX3-213ENST00000542641 ZNF606Q8WXB4 792 aa12.3□□□□□ -0.44
YBX3-213ENST00000542641 FUBP3Q96I24 572 aaKnown RBP eCLIP12.3□□□□□ -0.44
YBX3-213ENST00000542641 GUCD1Q96NT3 240 aa12.3□□□□□ -0.44
YBX3-213ENST00000542641 SEPT5Q99719 369 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms