RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 FSD1LQ9BXM9 530 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 TINAGL1Q9GZM7 467 aaPredicted RBP1.19□□□□□ -2.22
COPB1-212ENST00000534771 SIK2Q9H0K1 926 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 FAM234AQ9H0X4 552 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 BRD9Q9H8M2 597 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 MLXIPQ9HAP2 919 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 MAN1C1Q9NR34 630 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 TFCP2L1Q9NZI6 479 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 HEY2Q9UBP5 337 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 CCNL1Q9UK58 526 aaPredicted RBP1.19□□□□□ -2.22
COPB1-212ENST00000534771 ADAMTS5Q9UNA0 930 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 SH2B3Q9UQQ2 575 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 PCDHA13Q9Y5I0 950 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 RAD54BQ9Y620 910 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 HS3ST3B1Q9Y662 390 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 LACTBL1A8MY62 500 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 TMEM232C9JQI7 657 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 VPS4BO75351 444 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 TULP3O75386 442 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 USP1O94782 785 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 PDE8BO95263 885 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 IGKV3-20P01619 116 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 FESP07332 822 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 DLDP09622 509 aaKnown RBP1.18□□□□□ -2.22
COPB1-212ENST00000534771 OSMP13725 252 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 CDC25AP30304 524 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 CYP2C19P33261 490 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 MTNR1BP49286 362 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 PSMC1P62191 440 aaKnown RBP1.18□□□□□ -2.22
COPB1-212ENST00000534771 GPSM2P81274 684 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 ZXDBP98169 803 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 ID2Q02363 134 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 TARDBPQ13148 414 aaKnown RBP eCLIP1.18□□□□□ -2.22
COPB1-212ENST00000534771 RAB39AQ14964 217 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 ASIC2Q16515 512 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 FAM187BQ17R55 369 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 TKFCQ3LXA3 575 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 C9orf50Q5SZB4 431 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 L1TD1Q5T7N2 865 aaKnown RBP1.18□□□□□ -2.22
COPB1-212ENST00000534771 GFI1BQ5VTD9 330 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 GADL1Q6ZQY3 521 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 SUGP2Q8IX01 1082 aaKnown RBP eCLIP1.18□□□□□ -2.22
COPB1-212ENST00000534771 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP1.18□□□□□ -2.22
COPB1-212ENST00000534771 ARFGAP1Q8N6T3 406 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 ZNF548Q8NEK5 533 aaPredicted RBP1.18□□□□□ -2.22
COPB1-212ENST00000534771 IFI44Q8TCB0 444 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 NRG4Q8WWG1 115 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 XAGE5Q8WWM1 108 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 C8orf37Q96NL8 207 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 CAMK1GQ96NX5 476 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 FYTTD1Q96QD9 318 aaKnown RBP1.18□□□□□ -2.22
COPB1-212ENST00000534771 SLC2A13Q96QE2 648 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 SNX18Q96RF0 628 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 EFHD1Q9BUP0 239 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 TMEM184CQ9NVA4 438 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 SIDT1Q9NXL6 827 aaKnown RBP1.18□□□□□ -2.22
COPB1-212ENST00000534771 ETAA1Q9NY74 926 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 CALCOCO1Q9P1Z2 691 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 SAP30BPQ9UHR5 308 aaKnown RBP1.18□□□□□ -2.22
COPB1-212ENST00000534771 ERRFI1Q9UJM3 462 aaPredicted RBP1.18□□□□□ -2.22
COPB1-212ENST00000534771 MAPRE3Q9UPY8 281 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 PLAAQ9Y263 795 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 ZMYM2Q9UBW7 1377 aa1.18□□□□□ -2.22
COPB1-212ENST00000534771 TCF20Q9UGU0 1960 aaKnown RBP1.17□□□□□ -2.22
COPB1-212ENST00000534771 TCRBV5S1A1TA0A578 114 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 A1L4Q6 167 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 IFITM10A6NMD0 228 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 BTBD19C9JJ37 291 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 E9PSI1 815 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 NTN3O00634 580 aaPredicted RBP1.17□□□□□ -2.22
COPB1-212ENST00000534771 SGTAO43765 313 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 PDE8AO60658 829 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 KIF20AO95235 890 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 TOMM40O96008 361 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 CHEK2O96017 543 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 RPLP2P05387 115 aaKnown RBP1.17□□□□□ -2.22
COPB1-212ENST00000534771 GNAI3P08754 354 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 CYP19A1P11511 503 aaPredicted RBP1.17□□□□□ -2.22
COPB1-212ENST00000534771 MYCLP1P12525 358 aaPredicted RBP1.17□□□□□ -2.22
COPB1-212ENST00000534771 CHRM3P20309 590 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 GCLCP48506 637 aaPredicted RBP1.17□□□□□ -2.22
COPB1-212ENST00000534771 TOB1P50616 345 aaPredicted RBP1.17□□□□□ -2.22
COPB1-212ENST00000534771 ALDH5A1P51649 535 aaPredicted RBP1.17□□□□□ -2.22
COPB1-212ENST00000534771 CLCN2P51788 898 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 GNAI1P63096 354 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 SP2Q02086 613 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 SRSF1Q07955 248 aaKnown RBP eCLIP1.17□□□□□ -2.223e-14■■■□□ 17.4
COPB1-212ENST00000534771 C4orf46Q504U0 113 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 CCDC93Q567U6 631 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 PPP4R3AQ6IN85 833 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 KIRREL2Q6UWL6 708 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 TMEM108Q6UXF1 575 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 NPNTQ6UXI9 565 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 DEF8Q6ZN54 512 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 Q6ZWC4 215 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 MIGA2Q7L4E1 593 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 PIP4P1Q86T03 277 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 USP37Q86T82 979 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 ANKRD13BQ86YJ7 626 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 PELI3Q8N2H9 469 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms