RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-222	ENST00000520400		E7ENX8	843 aa		5.51	□□□□□ -1.53
CTNNA1-222	ENST00000520400	AGPS	O00116	658 aa		5.51	□□□□□ -1.53
CTNNA1-222	ENST00000520400	MYO1C	O00159	1063 aa		5.51	□□□□□ -1.53
CTNNA1-222	ENST00000520400	RRP9	O43818	475 aa	Known RBP	5.51	□□□□□ -1.53
CTNNA1-222	ENST00000520400	CDKL5	O76039	1030 aa		5.51	□□□□□ -1.53
CTNNA1-222	ENST00000520400	ATXN1L	P0C7T5	689 aa	Known RBP	5.51	□□□□□ -1.53
CTNNA1-222	ENST00000520400	PPP3CB	P16298	524 aa		5.51	□□□□□ -1.53
CTNNA1-222	ENST00000520400	ACVR2A	P27037	513 aa		5.51	□□□□□ -1.53
CTNNA1-222	ENST00000520400	GABRB3	P28472	473 aa		5.51	□□□□□ -1.53
CTNNA1-222	ENST00000520400	ADORA2A	P29274	412 aa		5.51	□□□□□ -1.53
CTNNA1-222	ENST00000520400	BMPR1A	P36894	532 aa		5.51	□□□□□ -1.53
CTNNA1-222	ENST00000520400	TAP2	Q03519	686 aa		5.51	□□□□□ -1.53
CTNNA1-222	ENST00000520400	CHAF1A	Q13111	956 aa	Predicted RBP	5.51	□□□□□ -1.53
CTNNA1-222	ENST00000520400	STK3	Q13188	491 aa		5.51	□□□□□ -1.53
CTNNA1-222	ENST00000520400	FOXR2	Q6PJQ5	311 aa		5.51	□□□□□ -1.53
CTNNA1-222	ENST00000520400	USP49	Q70CQ1	688 aa		5.51	□□□□□ -1.53
CTNNA1-222	ENST00000520400	BPIFB1	Q8TDL5	484 aa		5.51	□□□□□ -1.53
CTNNA1-222	ENST00000520400	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	5.51	□□□□□ -1.53
CTNNA1-222	ENST00000520400	ZC3H10	Q96K80	434 aa	Known RBP	5.51	□□□□□ -1.53
CTNNA1-222	ENST00000520400	AMBRA1	Q9C0C7	1298 aa		5.51	□□□□□ -1.53
CTNNA1-222	ENST00000520400	XPNPEP3	Q9NQH7	507 aa		5.51	□□□□□ -1.53
CTNNA1-222	ENST00000520400	PARPBP	Q9NWS1	579 aa		5.51	□□□□□ -1.53
CTNNA1-222	ENST00000520400	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	5.51	□□□□□ -1.53
CTNNA1-222	ENST00000520400	RNF181	Q9P0P0	153 aa		5.51	□□□□□ -1.53
CTNNA1-222	ENST00000520400	DKK4	Q9UBT3	224 aa		5.51	□□□□□ -1.53
CTNNA1-222	ENST00000520400	RGS17	Q9UGC6	210 aa	Predicted RBP	5.51	□□□□□ -1.53
CTNNA1-222	ENST00000520400	HDAC9	Q9UKV0	1011 aa		5.51	□□□□□ -1.53
CTNNA1-222	ENST00000520400	NDRG4	Q9ULP0	352 aa	Known RBP	5.51	□□□□□ -1.53
CTNNA1-222	ENST00000520400	PADI4	Q9UM07	663 aa		5.51	□□□□□ -1.53
CTNNA1-222	ENST00000520400	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400		A0A087WV62	115 aa		5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400	FAM234B	A2RU67	622 aa		5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400	MYADML2	A6NDP7	307 aa		5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400	CLCA1	A8K7I4	914 aa		5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400	ADM5	C9JUS6	153 aa		5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400	EEF1G	P26641	437 aa	Known RBP	5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400	IL1R2	P27930	398 aa		5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400	PTDSS1	P48651	473 aa	Known RBP	5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400	PXN	P49023	591 aa	Predicted RBP	5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400	DGKE	P52429	567 aa		5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400	LOXL3	P58215	753 aa		5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400	RPS7	P62081	194 aa	Known RBP	5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400	FPGS	Q05932	587 aa		5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400	GALNT1	Q10472	559 aa	Predicted RBP	5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400	FHL3	Q13643	280 aa		5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400	SPATS1	Q496A3	300 aa		5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400	SLC44A4	Q53GD3	710 aa		5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400	ARHGAP40	Q5TG30	622 aa		5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400	PLAG1	Q6DJT9	500 aa		5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400	CATSPERG	Q6ZRH7	1159 aa		5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400	RNF44	Q7L0R7	432 aa		5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400	PRRT2	Q7Z6L0	340 aa	Predicted RBP	5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400	MRGPRE	Q86SM8	312 aa		5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400	GLIS1	Q8NBF1	620 aa		5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400	TMEM171	Q8WVE6	324 aa		5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400	TTLL2	Q9BWV7	592 aa		5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400	GALNT9	Q9HCQ5	603 aa		5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400	ZNF212	Q9UDV6	495 aa		5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400	SERTAD3	Q9UJW9	196 aa		5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400	CDY1	Q9Y6F8	540 aa		5.5	□□□□□ -1.53
CTNNA1-222	ENST00000520400	SPATA31A3	Q5VYP0	1347 aa		5.49	□□□□□ -1.53
CTNNA1-222	ENST00000520400	LOC102723971	A0A1B0GUV8	181 aa		5.49	□□□□□ -1.53
CTNNA1-222	ENST00000520400		F5H423	210 aa	Predicted RBP	5.49	□□□□□ -1.53
CTNNA1-222	ENST00000520400		F5H697	171 aa		5.49	□□□□□ -1.53
CTNNA1-222	ENST00000520400	PLA2G6	O60733	806 aa		5.49	□□□□□ -1.53
CTNNA1-222	ENST00000520400	VNN1	O95497	513 aa		5.49	□□□□□ -1.53
CTNNA1-222	ENST00000520400	RHO	P08100	348 aa		5.49	□□□□□ -1.53
CTNNA1-222	ENST00000520400	PDIA3	P30101	505 aa	Known RBP	5.49	□□□□□ -1.53
CTNNA1-222	ENST00000520400	MAPK10	P53779	464 aa		5.49	□□□□□ -1.53
CTNNA1-222	ENST00000520400	MXRA7	P84157	204 aa		5.49	□□□□□ -1.53
CTNNA1-222	ENST00000520400	FOXE3	Q13461	319 aa		5.49	□□□□□ -1.53
CTNNA1-222	ENST00000520400	HLX	Q14774	488 aa	Predicted RBP	5.49	□□□□□ -1.53
CTNNA1-222	ENST00000520400	MIIP	Q5JXC2	388 aa		5.49	□□□□□ -1.53
CTNNA1-222	ENST00000520400	SP5	Q6BEB4	398 aa	Predicted RBP	5.49	□□□□□ -1.53
CTNNA1-222	ENST00000520400	RGS7BP	Q6MZT1	257 aa	Predicted RBP	5.49	□□□□□ -1.53
CTNNA1-222	ENST00000520400	CRTC1	Q6UUV9	634 aa		5.49	□□□□□ -1.53
CTNNA1-222	ENST00000520400	KIAA0408	Q6ZU52	694 aa		5.49	□□□□□ -1.53
CTNNA1-222	ENST00000520400	MICALCL	Q6ZW33	695 aa		5.49	□□□□□ -1.53
CTNNA1-222	ENST00000520400	TXLNB	Q8N3L3	684 aa		5.49	□□□□□ -1.53
CTNNA1-222	ENST00000520400	SSH3	Q8TE77	659 aa		5.49	□□□□□ -1.53
CTNNA1-222	ENST00000520400	SNX19	Q92543	992 aa		5.49	□□□□□ -1.53
CTNNA1-222	ENST00000520400	CDK5RAP1	Q96SZ6	601 aa	Known RBP	5.49	□□□□□ -1.53
CTNNA1-222	ENST00000520400	PTDSS2	Q9BVG9	487 aa		5.49	□□□□□ -1.53
CTNNA1-222	ENST00000520400	NRDE2	Q9H7Z3	1164 aa		5.49	□□□□□ -1.53
CTNNA1-222	ENST00000520400	GBA2	Q9HCG7	927 aa	Predicted RBP	5.49	□□□□□ -1.53
CTNNA1-222	ENST00000520400	IGSF9	Q9P2J2	1179 aa		5.49	□□□□□ -1.53
CTNNA1-222	ENST00000520400	CAPN11	Q9UMQ6	739 aa		5.49	□□□□□ -1.53
CTNNA1-222	ENST00000520400	FZD1	Q9UP38	647 aa		5.49	□□□□□ -1.53
CTNNA1-222	ENST00000520400		A0A0B4J269	797 aa		5.48	□□□□□ -1.53
CTNNA1-222	ENST00000520400	C1QTNF3-AMACR	E9PGA6	284 aa		5.48	□□□□□ -1.53
CTNNA1-222	ENST00000520400	IFRD1	O00458	451 aa	Predicted RBP	5.48	□□□□□ -1.53
CTNNA1-222	ENST00000520400	AREL1	O15033	823 aa		5.48	□□□□□ -1.53
CTNNA1-222	ENST00000520400	PPM1D	O15297	605 aa		5.48	□□□□□ -1.53
CTNNA1-222	ENST00000520400	EGR2	P11161	476 aa	Predicted RBP	5.48	□□□□□ -1.53
CTNNA1-222	ENST00000520400	CYP2C9	P11712	490 aa		5.48	□□□□□ -1.53
CTNNA1-222	ENST00000520400	LAG3	P18627	525 aa		5.48	□□□□□ -1.53
CTNNA1-222	ENST00000520400	ITGAL	P20701	1170 aa		5.48	□□□□□ -1.53
CTNNA1-222	ENST00000520400	CPT1A	P50416	773 aa		5.48	□□□□□ -1.53
CTNNA1-222	ENST00000520400	KRT17	Q04695	432 aa		5.48	□□□□□ -1.53
CTNNA1-222	ENST00000520400	OS9	Q13438	667 aa	Predicted RBP	5.48	□□□□□ -1.53

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